>>> py3-mpi4py: Building community/py3-mpi4py 3.1.3-r0 (using abuild 3.9.0-r0) started Sun, 17 Apr 2022 04:57:03 +0000 >>> py3-mpi4py: Checking sanity of /home/buildozer/aports/community/py3-mpi4py/APKBUILD... >>> py3-mpi4py: Analyzing dependencies... >>> py3-mpi4py: Installing for build: build-base python3 openmpi-dev py3-setuptools python3-dev (1/24) Installing libbz2 (1.0.8-r1) (2/24) Installing libffi (3.4.2-r1) (3/24) Installing gdbm (1.23-r0) (4/24) Installing xz-libs (5.2.5-r1) (5/24) Installing mpdecimal (2.5.1-r1) (6/24) Installing readline (8.1.2-r0) (7/24) Installing sqlite-libs (3.38.2-r0) (8/24) Installing python3 (3.10.3-r0) (9/24) Installing libevent (2.1.12-r4) (10/24) Installing eudev-libs (3.2.11-r0) (11/24) Installing libxml2 (2.9.13-r0) (12/24) Installing hwloc (2.7.0-r0) (13/24) Installing openmpi (4.1.2-r0) (14/24) Installing zlib-dev (1.2.12-r0) (15/24) Installing openmpi-dev (4.1.2-r0) (16/24) Installing py3-appdirs (1.4.4-r3) (17/24) Installing py3-more-itertools (8.12.0-r2) (18/24) Installing py3-ordered-set (4.0.2-r3) (19/24) Installing py3-parsing (2.4.7-r3) (20/24) Installing py3-six (1.16.0-r1) (21/24) Installing py3-packaging (21.3-r0) (22/24) Installing py3-setuptools (59.4.0-r0) (23/24) Installing python3-dev (3.10.3-r0) (24/24) Installing .makedepends-py3-mpi4py (20220417.045709) Executing busybox-1.35.0-r8.trigger OK: 420 MiB in 113 packages >>> py3-mpi4py: Cleaning up srcdir >>> py3-mpi4py: Cleaning up pkgdir >>> py3-mpi4py: Fetching https://distfiles.alpinelinux.org/distfiles/v3.16/mpi4py-3.1.3.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 2403k 100 2403k 0 0 16.2M 0 --:--:-- --:--:-- --:--:-- 16.3M >>> py3-mpi4py: Fetching https://distfiles.alpinelinux.org/distfiles/v3.16/mpi4py-3.1.3.tar.gz >>> py3-mpi4py: Checking sha512sums... mpi4py-3.1.3.tar.gz: OK >>> py3-mpi4py: Unpacking /var/cache/distfiles/v3.16/mpi4py-3.1.3.tar.gz... running build running build_src running build_py creating build creating build/lib.linux-i686-3.10 creating build/lib.linux-i686-3.10/mpi4py copying src/mpi4py/bench.py -> build/lib.linux-i686-3.10/mpi4py copying src/mpi4py/__init__.py -> build/lib.linux-i686-3.10/mpi4py copying src/mpi4py/__main__.py -> build/lib.linux-i686-3.10/mpi4py copying src/mpi4py/run.py -> build/lib.linux-i686-3.10/mpi4py creating build/lib.linux-i686-3.10/mpi4py/futures copying src/mpi4py/futures/_base.py -> build/lib.linux-i686-3.10/mpi4py/futures copying src/mpi4py/futures/_core.py -> build/lib.linux-i686-3.10/mpi4py/futures copying src/mpi4py/futures/__init__.py -> build/lib.linux-i686-3.10/mpi4py/futures copying src/mpi4py/futures/__main__.py -> build/lib.linux-i686-3.10/mpi4py/futures copying src/mpi4py/futures/_lib.py -> build/lib.linux-i686-3.10/mpi4py/futures copying src/mpi4py/futures/server.py -> build/lib.linux-i686-3.10/mpi4py/futures copying src/mpi4py/futures/pool.py -> build/lib.linux-i686-3.10/mpi4py/futures copying src/mpi4py/futures/aplus.py -> build/lib.linux-i686-3.10/mpi4py/futures creating build/lib.linux-i686-3.10/mpi4py/util copying src/mpi4py/util/__init__.py -> build/lib.linux-i686-3.10/mpi4py/util copying src/mpi4py/util/pkl5.py -> build/lib.linux-i686-3.10/mpi4py/util copying src/mpi4py/util/dtlib.py -> build/lib.linux-i686-3.10/mpi4py/util copying src/mpi4py/py.typed -> build/lib.linux-i686-3.10/mpi4py copying src/mpi4py/__main__.pyi -> build/lib.linux-i686-3.10/mpi4py copying src/mpi4py/MPI.pyi -> build/lib.linux-i686-3.10/mpi4py copying src/mpi4py/run.pyi -> build/lib.linux-i686-3.10/mpi4py copying src/mpi4py/__init__.pyi -> build/lib.linux-i686-3.10/mpi4py copying src/mpi4py/bench.pyi -> build/lib.linux-i686-3.10/mpi4py copying src/mpi4py/dl.pyi -> build/lib.linux-i686-3.10/mpi4py copying src/mpi4py/__init__.pxd -> build/lib.linux-i686-3.10/mpi4py copying src/mpi4py/libmpi.pxd -> build/lib.linux-i686-3.10/mpi4py copying src/mpi4py/MPI.pxd -> build/lib.linux-i686-3.10/mpi4py creating build/lib.linux-i686-3.10/mpi4py/include creating build/lib.linux-i686-3.10/mpi4py/include/mpi4py copying src/mpi4py/include/mpi4py/mpi4py.MPI_api.h -> build/lib.linux-i686-3.10/mpi4py/include/mpi4py copying src/mpi4py/include/mpi4py/mpi4py.h -> build/lib.linux-i686-3.10/mpi4py/include/mpi4py copying src/mpi4py/include/mpi4py/mpi4py.MPI.h -> build/lib.linux-i686-3.10/mpi4py/include/mpi4py copying src/mpi4py/include/mpi4py/mpi4py.i -> build/lib.linux-i686-3.10/mpi4py/include/mpi4py copying src/mpi4py/include/mpi4py/mpi.pxi -> build/lib.linux-i686-3.10/mpi4py/include/mpi4py copying src/mpi4py/futures/__main__.pyi -> build/lib.linux-i686-3.10/mpi4py/futures copying src/mpi4py/futures/server.pyi -> build/lib.linux-i686-3.10/mpi4py/futures copying src/mpi4py/futures/aplus.pyi -> build/lib.linux-i686-3.10/mpi4py/futures copying src/mpi4py/futures/pool.pyi -> build/lib.linux-i686-3.10/mpi4py/futures copying src/mpi4py/futures/__init__.pyi -> build/lib.linux-i686-3.10/mpi4py/futures copying src/mpi4py/futures/_lib.pyi -> build/lib.linux-i686-3.10/mpi4py/futures copying src/mpi4py/futures/_core.pyi -> build/lib.linux-i686-3.10/mpi4py/futures copying src/mpi4py/util/pkl5.pyi -> build/lib.linux-i686-3.10/mpi4py/util copying src/mpi4py/util/dtlib.pyi -> build/lib.linux-i686-3.10/mpi4py/util copying src/mpi4py/util/__init__.pyi -> build/lib.linux-i686-3.10/mpi4py/util running build_clib MPI configuration: [mpi] from 'mpi.cfg' MPI C compiler: /usr/bin/mpicc MPI C++ compiler: /usr/bin/mpicxx MPI F compiler: /usr/bin/mpifort MPI F90 compiler: /usr/bin/mpif90 MPI F77 compiler: /usr/bin/mpif77 checking for library 'lmpe' ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -c _configtest.c -o _configtest.o /usr/bin/mpicc -Os -fomit-frame-pointer -Os -fomit-frame-pointer _configtest.o -llmpe -o _configtest /usr/lib/gcc/i586-alpine-linux-musl/11.2.1/../../../../i586-alpine-linux-musl/bin/ld: cannot find -llmpe: No such file or directory collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o building 'mpe' dylib library creating build/temp.linux-i686-3.10 creating build/temp.linux-i686-3.10/src creating build/temp.linux-i686-3.10/src/lib-pmpi /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -c src/lib-pmpi/mpe.c -o build/temp.linux-i686-3.10/src/lib-pmpi/mpe.o creating build/lib.linux-i686-3.10/mpi4py/lib-pmpi /usr/bin/mpicc -shared -Os -fomit-frame-pointer -Os -fomit-frame-pointer -Wl,--no-as-needed build/temp.linux-i686-3.10/src/lib-pmpi/mpe.o -o build/lib.linux-i686-3.10/mpi4py/lib-pmpi/libmpe.so checking for library 'vt-mpi' ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -c _configtest.c -o _configtest.o /usr/bin/mpicc -Os -fomit-frame-pointer -Os -fomit-frame-pointer _configtest.o -lvt-mpi -o _configtest /usr/lib/gcc/i586-alpine-linux-musl/11.2.1/../../../../i586-alpine-linux-musl/bin/ld: cannot find -lvt-mpi: No such file or directory collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o checking for library 'vt.mpi' ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -c _configtest.c -o _configtest.o /usr/bin/mpicc -Os -fomit-frame-pointer -Os -fomit-frame-pointer _configtest.o -lvt.mpi -o _configtest /usr/lib/gcc/i586-alpine-linux-musl/11.2.1/../../../../i586-alpine-linux-musl/bin/ld: cannot find -lvt.mpi: No such file or directory collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o building 'vt' dylib library /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -c src/lib-pmpi/vt.c -o build/temp.linux-i686-3.10/src/lib-pmpi/vt.o /usr/bin/mpicc -shared -Os -fomit-frame-pointer -Os -fomit-frame-pointer -Wl,--no-as-needed build/temp.linux-i686-3.10/src/lib-pmpi/vt.o -o build/lib.linux-i686-3.10/mpi4py/lib-pmpi/libvt.so checking for library 'vt-mpi' ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -c _configtest.c -o _configtest.o /usr/bin/mpicc -Os -fomit-frame-pointer -Os -fomit-frame-pointer _configtest.o -lvt-mpi -o _configtest /usr/lib/gcc/i586-alpine-linux-musl/11.2.1/../../../../i586-alpine-linux-musl/bin/ld: cannot find -lvt-mpi: No such file or directory collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o checking for library 'vt.mpi' ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -c _configtest.c -o _configtest.o /usr/bin/mpicc -Os -fomit-frame-pointer -Os -fomit-frame-pointer _configtest.o -lvt.mpi -o _configtest /usr/lib/gcc/i586-alpine-linux-musl/11.2.1/../../../../i586-alpine-linux-musl/bin/ld: cannot find -lvt.mpi: No such file or directory collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o building 'vt-mpi' dylib library /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -c src/lib-pmpi/vt-mpi.c -o build/temp.linux-i686-3.10/src/lib-pmpi/vt-mpi.o /usr/bin/mpicc -shared -Os -fomit-frame-pointer -Os -fomit-frame-pointer -Wl,--no-as-needed build/temp.linux-i686-3.10/src/lib-pmpi/vt-mpi.o -o build/lib.linux-i686-3.10/mpi4py/lib-pmpi/libvt-mpi.so checking for library 'vt-hyb' ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -c _configtest.c -o _configtest.o /usr/bin/mpicc -Os -fomit-frame-pointer -Os -fomit-frame-pointer _configtest.o -lvt-hyb -o _configtest /usr/lib/gcc/i586-alpine-linux-musl/11.2.1/../../../../i586-alpine-linux-musl/bin/ld: cannot find -lvt-hyb: No such file or directory collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o checking for library 'vt.ompi' ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -c _configtest.c -o _configtest.o /usr/bin/mpicc -Os -fomit-frame-pointer -Os -fomit-frame-pointer _configtest.o -lvt.ompi -o _configtest /usr/lib/gcc/i586-alpine-linux-musl/11.2.1/../../../../i586-alpine-linux-musl/bin/ld: cannot find -lvt.ompi: No such file or directory collect2: error: ld returned 1 exit status failure. removing: _configtest.c _configtest.o building 'vt-hyb' dylib library /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -c src/lib-pmpi/vt-hyb.c -o build/temp.linux-i686-3.10/src/lib-pmpi/vt-hyb.o /usr/bin/mpicc -shared -Os -fomit-frame-pointer -Os -fomit-frame-pointer -Wl,--no-as-needed build/temp.linux-i686-3.10/src/lib-pmpi/vt-hyb.o -o build/lib.linux-i686-3.10/mpi4py/lib-pmpi/libvt-hyb.so running build_ext MPI configuration: [mpi] from 'mpi.cfg' MPI C compiler: /usr/bin/mpicc MPI C++ compiler: /usr/bin/mpicxx MPI F compiler: /usr/bin/mpifort MPI F90 compiler: /usr/bin/mpif90 MPI F77 compiler: /usr/bin/mpif77 checking for dlopen() availability ... checking for header 'dlfcn.h' ... gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.10 -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o success! checking for library 'dl' ... gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.10 -c _configtest.c -o _configtest.o gcc -Os -fomit-frame-pointer -Os -fomit-frame-pointer _configtest.o -Lbuild/temp.linux-i686-3.10 -ldl -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for function 'dlopen' ... gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.10 -c _configtest.c -o _configtest.o gcc -Os -fomit-frame-pointer -Os -fomit-frame-pointer _configtest.o -Lbuild/temp.linux-i686-3.10 -ldl -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'mpi4py.dl' extension gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -DHAVE_DLFCN_H=1 -DHAVE_DLOPEN=1 -I/usr/include/python3.10 -c src/dynload.c -o build/temp.linux-i686-3.10/src/dynload.o gcc -shared -Os -fomit-frame-pointer -Os -fomit-frame-pointer build/temp.linux-i686-3.10/src/dynload.o -Lbuild/temp.linux-i686-3.10 -ldl -o build/lib.linux-i686-3.10/mpi4py/dl.cpython-310-i386-linux-gnu.so checking for MPI compile and link ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.10 -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.10 -c _configtest.c -o _configtest.o /usr/bin/mpicc -Os -fomit-frame-pointer -Os -fomit-frame-pointer _configtest.o -Lbuild/temp.linux-i686-3.10 -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for missing MPI functions/symbols ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.10 -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o checking for function 'MPI_Type_create_f90_integer' ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.10 -c _configtest.c -o _configtest.o /usr/bin/mpicc -Os -fomit-frame-pointer -Os -fomit-frame-pointer _configtest.o -Lbuild/temp.linux-i686-3.10 -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for function 'MPI_Type_create_f90_real' ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.10 -c _configtest.c -o _configtest.o /usr/bin/mpicc -Os -fomit-frame-pointer -Os -fomit-frame-pointer _configtest.o -Lbuild/temp.linux-i686-3.10 -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for function 'MPI_Type_create_f90_complex' ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.10 -c _configtest.c -o _configtest.o /usr/bin/mpicc -Os -fomit-frame-pointer -Os -fomit-frame-pointer _configtest.o -Lbuild/temp.linux-i686-3.10 -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for function 'MPI_Status_c2f' ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.10 -c _configtest.c -o _configtest.o /usr/bin/mpicc -Os -fomit-frame-pointer -Os -fomit-frame-pointer _configtest.o -Lbuild/temp.linux-i686-3.10 -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for function 'MPI_Status_f2c' ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.10 -c _configtest.c -o _configtest.o /usr/bin/mpicc -Os -fomit-frame-pointer -Os -fomit-frame-pointer _configtest.o -Lbuild/temp.linux-i686-3.10 -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for symbol 'MPI_LB' ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.10 -c _configtest.c -o _configtest.o In file included from _configtest.c:2: _configtest.c: In function 'main': _configtest.c:5:23: error: static assertion failed: "MPI_LB was removed in MPI-3.0. Use MPI_Type_create_resized instead." 5 | MPI_Datatype s; s = MPI_LB; (void)s; | ^~~~~~ failure. removing: _configtest.c _configtest.o checking for symbol 'MPI_UB' ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.10 -c _configtest.c -o _configtest.o In file included from _configtest.c:2: _configtest.c: In function 'main': _configtest.c:5:23: error: static assertion failed: "MPI_UB was removed in MPI-3.0. Use MPI_Type_create_resized instead." 5 | MPI_Datatype s; s = MPI_UB; (void)s; | ^~~~~~ failure. removing: _configtest.c _configtest.o checking for dlopen() availability ... checking for header 'dlfcn.h' ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.10 -c _configtest.c -o _configtest.o success! removing: _configtest.c _configtest.o success! checking for library 'dl' ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.10 -c _configtest.c -o _configtest.o /usr/bin/mpicc -Os -fomit-frame-pointer -Os -fomit-frame-pointer _configtest.o -Lbuild/temp.linux-i686-3.10 -ldl -o _configtest success! removing: _configtest.c _configtest.o _configtest checking for function 'dlopen' ... /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.10 -c _configtest.c -o _configtest.o /usr/bin/mpicc -Os -fomit-frame-pointer -Os -fomit-frame-pointer _configtest.o -Lbuild/temp.linux-i686-3.10 -ldl -o _configtest success! removing: _configtest.c _configtest.o _configtest building 'mpi4py.MPI' extension /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fomit-frame-pointer -g -fomit-frame-pointer -g -fomit-frame-pointer -g -DTHREAD_STACK_SIZE=0x100000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -DPyMPI_MISSING_MPI_LB=1 -DPyMPI_MISSING_MPI_UB=1 -DHAVE_DLFCN_H=1 -DHAVE_DLOPEN=1 -I/usr/include/python3.10 -c src/MPI.c -o build/temp.linux-i686-3.10/src/MPI.o /usr/bin/mpicc -shared -Os -fomit-frame-pointer -Os -fomit-frame-pointer build/temp.linux-i686-3.10/src/MPI.o -Lbuild/temp.linux-i686-3.10 -ldl -o build/lib.linux-i686-3.10/mpi4py/MPI.cpython-310-i386-linux-gnu.so writing build/lib.linux-i686-3.10/mpi4py/mpi.cfg >>> py3-mpi4py: Entering fakeroot... running install /usr/lib/python3.10/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_src running build_py running build_clib MPI configuration: [mpi] from 'mpi.cfg' MPI C compiler: /usr/bin/mpicc MPI C++ compiler: /usr/bin/mpicxx MPI F compiler: /usr/bin/mpifort MPI F90 compiler: /usr/bin/mpif90 MPI F77 compiler: /usr/bin/mpif77 running build_ext MPI configuration: [mpi] from 'mpi.cfg' MPI C compiler: /usr/bin/mpicc MPI C++ compiler: /usr/bin/mpicxx MPI F compiler: /usr/bin/mpifort MPI F90 compiler: /usr/bin/mpif90 MPI F77 compiler: /usr/bin/mpif77 running install_lib creating /home/buildozer/aports/community/py3-mpi4py/pkg creating /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py creating /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr creating /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib creating /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10 creating /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages creating /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py copying build/lib.linux-i686-3.10/mpi4py/bench.py -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py copying build/lib.linux-i686-3.10/mpi4py/MPI.cpython-310-i386-linux-gnu.so -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py copying build/lib.linux-i686-3.10/mpi4py/__init__.pxd -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py copying build/lib.linux-i686-3.10/mpi4py/__main__.pyi -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py copying build/lib.linux-i686-3.10/mpi4py/MPI.pyi -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py creating /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/include creating /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.10/mpi4py/include/mpi4py/mpi4py.MPI_api.h -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.10/mpi4py/include/mpi4py/mpi.pxi -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.10/mpi4py/include/mpi4py/mpi4py.i -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.10/mpi4py/include/mpi4py/mpi4py.h -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.10/mpi4py/include/mpi4py/mpi4py.MPI.h -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/include/mpi4py copying build/lib.linux-i686-3.10/mpi4py/mpi.cfg -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py copying build/lib.linux-i686-3.10/mpi4py/libmpi.pxd -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py copying build/lib.linux-i686-3.10/mpi4py/__init__.py -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py copying build/lib.linux-i686-3.10/mpi4py/__main__.py -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py copying build/lib.linux-i686-3.10/mpi4py/py.typed -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py copying build/lib.linux-i686-3.10/mpi4py/dl.cpython-310-i386-linux-gnu.so -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py creating /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-3.10/mpi4py/lib-pmpi/libvt.so -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-3.10/mpi4py/lib-pmpi/libmpe.so -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-3.10/mpi4py/lib-pmpi/libvt-mpi.so -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-3.10/mpi4py/lib-pmpi/libvt-hyb.so -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/lib-pmpi copying build/lib.linux-i686-3.10/mpi4py/run.pyi -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py copying build/lib.linux-i686-3.10/mpi4py/MPI.pxd -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py copying build/lib.linux-i686-3.10/mpi4py/__init__.pyi -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py copying build/lib.linux-i686-3.10/mpi4py/bench.pyi -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py creating /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/util copying build/lib.linux-i686-3.10/mpi4py/util/pkl5.pyi -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/util copying build/lib.linux-i686-3.10/mpi4py/util/__init__.py -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/util copying build/lib.linux-i686-3.10/mpi4py/util/pkl5.py -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/util copying build/lib.linux-i686-3.10/mpi4py/util/dtlib.pyi -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/util copying build/lib.linux-i686-3.10/mpi4py/util/__init__.pyi -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/util copying build/lib.linux-i686-3.10/mpi4py/util/dtlib.py -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/util creating /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures copying build/lib.linux-i686-3.10/mpi4py/futures/_base.py -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures copying build/lib.linux-i686-3.10/mpi4py/futures/__main__.pyi -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures copying build/lib.linux-i686-3.10/mpi4py/futures/_core.py -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures copying build/lib.linux-i686-3.10/mpi4py/futures/server.pyi -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures copying build/lib.linux-i686-3.10/mpi4py/futures/__init__.py -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures copying build/lib.linux-i686-3.10/mpi4py/futures/__main__.py -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures copying build/lib.linux-i686-3.10/mpi4py/futures/_lib.py -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures copying build/lib.linux-i686-3.10/mpi4py/futures/aplus.pyi -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures copying build/lib.linux-i686-3.10/mpi4py/futures/pool.pyi -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures copying build/lib.linux-i686-3.10/mpi4py/futures/__init__.pyi -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures copying build/lib.linux-i686-3.10/mpi4py/futures/_lib.pyi -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures copying build/lib.linux-i686-3.10/mpi4py/futures/_core.pyi -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures copying build/lib.linux-i686-3.10/mpi4py/futures/server.py -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures copying build/lib.linux-i686-3.10/mpi4py/futures/pool.py -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures copying build/lib.linux-i686-3.10/mpi4py/futures/aplus.py -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures copying build/lib.linux-i686-3.10/mpi4py/run.py -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py copying build/lib.linux-i686-3.10/mpi4py/dl.pyi -> /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py byte-compiling /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/bench.py to bench.cpython-310.pyc byte-compiling /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/__init__.py to __init__.cpython-310.pyc byte-compiling /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/__main__.py to __main__.cpython-310.pyc byte-compiling /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/util/__init__.py to __init__.cpython-310.pyc byte-compiling /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/util/pkl5.py to pkl5.cpython-310.pyc byte-compiling /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/util/dtlib.py to dtlib.cpython-310.pyc byte-compiling /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures/_base.py to _base.cpython-310.pyc byte-compiling /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures/_core.py to _core.cpython-310.pyc byte-compiling /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures/__init__.py to __init__.cpython-310.pyc byte-compiling /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures/__main__.py to __main__.cpython-310.pyc byte-compiling /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures/_lib.py to _lib.cpython-310.pyc byte-compiling /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures/server.py to server.cpython-310.pyc byte-compiling /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures/pool.py to pool.cpython-310.pyc byte-compiling /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/futures/aplus.py to aplus.cpython-310.pyc byte-compiling /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py/run.py to run.cpython-310.pyc running install_egg_info running egg_info writing src/mpi4py.egg-info/PKG-INFO writing dependency_links to src/mpi4py.egg-info/dependency_links.txt writing top-level names to src/mpi4py.egg-info/top_level.txt reading manifest file 'src/mpi4py.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.rst' writing manifest file 'src/mpi4py.egg-info/SOURCES.txt' Copying src/mpi4py.egg-info to /home/buildozer/aports/community/py3-mpi4py/pkg/py3-mpi4py/usr/lib/python3.10/site-packages/mpi4py-3.1.3-py3.10.egg-info running install_scripts >>> py3-mpi4py*: Running postcheck for py3-mpi4py >>> py3-mpi4py*: Preparing package py3-mpi4py... >>> py3-mpi4py*: Stripping binaries >>> WARNING: py3-mpi4py*: Redundant /usr/lib in rpath found >>> py3-mpi4py*: Scanning shared objects >>> py3-mpi4py*: Tracing dependencies... python3 so:libc.musl-x86.so.1 so:libmpi.so.40 >>> py3-mpi4py*: Package size: 1.7 MB >>> py3-mpi4py*: Compressing data... >>> py3-mpi4py*: Create checksum... >>> py3-mpi4py*: Create py3-mpi4py-3.1.3-r0.apk >>> py3-mpi4py: Build complete at Sun, 17 Apr 2022 04:58:30 +0000 elapsed time 0h 1m 27s >>> py3-mpi4py: Cleaning up srcdir >>> py3-mpi4py: Cleaning up pkgdir >>> py3-mpi4py: Uninstalling dependencies... (1/24) Purging .makedepends-py3-mpi4py (20220417.045709) (2/24) Purging openmpi-dev (4.1.2-r0) (3/24) Purging py3-setuptools (59.4.0-r0) (4/24) Purging py3-appdirs (1.4.4-r3) (5/24) Purging py3-more-itertools (8.12.0-r2) (6/24) Purging py3-ordered-set (4.0.2-r3) (7/24) Purging py3-packaging (21.3-r0) (8/24) Purging py3-six (1.16.0-r1) (9/24) Purging py3-parsing (2.4.7-r3) (10/24) Purging python3-dev (3.10.3-r0) (11/24) Purging python3 (3.10.3-r0) (12/24) Purging libbz2 (1.0.8-r1) (13/24) Purging libffi (3.4.2-r1) (14/24) Purging gdbm (1.23-r0) (15/24) Purging openmpi (4.1.2-r0) (16/24) Purging hwloc (2.7.0-r0) (17/24) Purging libxml2 (2.9.13-r0) (18/24) Purging xz-libs (5.2.5-r1) (19/24) Purging mpdecimal (2.5.1-r1) (20/24) Purging readline (8.1.2-r0) (21/24) Purging sqlite-libs (3.38.2-r0) (22/24) Purging libevent (2.1.12-r4) (23/24) Purging eudev-libs (3.2.11-r0) (24/24) Purging zlib-dev (1.2.12-r0) Executing busybox-1.35.0-r8.trigger OK: 322 MiB in 89 packages >>> py3-mpi4py: Updating the community/x86 repository index... >>> py3-mpi4py: Signing the index...