>>> py3-kallisto: Building community/py3-kallisto 1.0.9-r1 (using abuild 3.11.0_rc13-r0) started Mon, 24 Apr 2023 01:58:19 +0000 >>> py3-kallisto: Checking sanity of /home/buildozer/aports/community/py3-kallisto/APKBUILD... >>> py3-kallisto: Analyzing dependencies... >>> py3-kallisto: Installing for build: build-base python3 py3-click py3-numpy py3-scipy py3-poetry-core py3-gpep517 py3-wheel python3-dev py3-pytest py3-pytest-runner (1/67) Installing libbz2 (1.0.8-r5) (2/67) Installing libffi (3.4.4-r2) (3/67) Installing gdbm (1.23-r1) (4/67) Installing xz-libs (5.4.2-r1) (5/67) Installing mpdecimal (2.5.1-r2) (6/67) Installing libpanelw (6.4_p20230401-r5) (7/67) Installing readline (8.2.1-r1) (8/67) Installing sqlite-libs (3.41.2-r2) (9/67) Installing python3 (3.11.3-r10) (10/67) Installing python3-pycache-pyc0 (3.11.3-r10) (11/67) Installing pyc (0.1-r0) (12/67) Installing python3-pyc (3.11.3-r10) (13/67) Installing py3-click (8.1.3-r2) (14/67) Installing py3-click-pyc (8.1.3-r2) (15/67) Installing libquadmath (12.2.1_git20220924-r10) (16/67) Installing libgfortran (12.2.1_git20220924-r10) (17/67) Installing openblas (0.3.23-r0) (18/67) Installing py3-numpy (1.24.2-r1) (19/67) Installing py3-numpy-pyc (1.24.2-r1) (20/67) Installing py3-parsing (3.0.9-r2) (21/67) Installing py3-parsing-pyc (3.0.9-r2) (22/67) Installing py3-packaging (23.1-r1) (23/67) Installing py3-packaging-pyc (23.1-r1) (24/67) Installing py3-platformdirs (3.2.0-r0) (25/67) Installing py3-certifi (2022.12.7-r2) (26/67) Installing py3-certifi-pyc (2022.12.7-r2) (27/67) Installing py3-charset-normalizer (3.1.0-r1) (28/67) Installing py3-charset-normalizer-pyc (3.1.0-r1) (29/67) Installing py3-idna (3.4-r4) (30/67) Installing py3-idna-pyc (3.4-r4) (31/67) Installing py3-urllib3 (1.26.15-r1) (32/67) Installing py3-urllib3-pyc (1.26.15-r1) (33/67) Installing py3-requests (2.28.2-r1) (34/67) Installing py3-requests-pyc (2.28.2-r1) (35/67) Installing py3-pooch (1.7.0-r0) (36/67) Installing python3-dev (3.11.3-r10) (37/67) Installing py3-numpy-f2py (1.24.2-r1) (38/67) Installing py3-scipy (1.10.1-r0) (39/67) Installing py3-pyrsistent (0.19.3-r1) (40/67) Installing py3-pyrsistent-pyc (0.19.3-r1) (41/67) Installing py3-attrs (23.1.0-r1) (42/67) Installing py3-attrs-pyc (23.1.0-r1) (43/67) Installing py3-jsonschema (4.7.2-r4) (44/67) Installing py3-jsonschema-pyc (4.7.2-r4) (45/67) Installing py3-lark-parser (0.11.3-r3) (46/67) Installing py3-lark-parser-pyc (0.11.3-r3) (47/67) Installing py3-tomlkit (0.11.6-r2) (48/67) Installing py3-tomlkit-pyc (0.11.6-r2) (49/67) Installing py3-poetry-core (1.5.2-r0) (50/67) Installing py3-installer (0.7.0-r1) (51/67) Installing py3-installer-pyc (0.7.0-r1) (52/67) Installing py3-gpep517 (13-r2) (53/67) Installing py3-gpep517-pyc (13-r2) (54/67) Installing py3-wheel (0.40.0-r1) (55/67) Installing py3-wheel-pyc (0.40.0-r1) (56/67) Installing py3-iniconfig (1.1.1-r6) (57/67) Installing py3-iniconfig-pyc (1.1.1-r6) (58/67) Installing py3-pluggy (1.0.0-r3) (59/67) Installing py3-pluggy-pyc (1.0.0-r3) (60/67) Installing py3-py (1.11.0-r2) (61/67) Installing py3-py-pyc (1.11.0-r2) (62/67) Installing py3-pytest (7.3.1-r1) (63/67) Installing py3-pytest-pyc (7.3.1-r1) (64/67) Installing py3-setuptools (67.7.1-r0) (65/67) Installing py3-setuptools-pyc (67.7.1-r0) (66/67) Installing py3-pytest-runner (6.0.0-r1) (67/67) Installing .makedepends-py3-kallisto (20230424.015821) Executing busybox-1.36.0-r7.trigger OK: 673 MiB in 165 packages >>> py3-kallisto: Cleaning up srcdir >>> py3-kallisto: Cleaning up pkgdir >>> py3-kallisto: Fetching https://distfiles.alpinelinux.org/distfiles/v3.18/kallisto-1.0.9.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 136k 100 136k 0 0 1119k 0 --:--:-- --:--:-- --:--:-- 1126k >>> py3-kallisto: Fetching https://distfiles.alpinelinux.org/distfiles/v3.18/kallisto-1.0.9.tar.gz >>> py3-kallisto: Checking sha512sums... kallisto-1.0.9.tar.gz: OK poetry.patch: OK >>> py3-kallisto: Unpacking /var/cache/distfiles/v3.18/kallisto-1.0.9.tar.gz... >>> py3-kallisto: poetry.patch patching file pyproject.toml 2023-04-24 01:58:26,149 gpep517 INFO Building wheel via backend poetry.core.masonry.api 2023-04-24 01:58:26,547 poetry.core.masonry.builders.wheel INFO Building wheel 2023-04-24 01:58:26,592 poetry.core.masonry.builders.wheel INFO Built kallisto-1.0.9-py3-none-any.whl 2023-04-24 01:58:26,593 gpep517 INFO The backend produced dist/kallisto-1.0.9-py3-none-any.whl kallisto-1.0.9-py3-none-any.whl ============================= test session starts ============================== platform linux -- Python 3.11.3, pytest-7.3.1, pluggy-1.0.0 rootdir: /home/buildozer/aports/community/py3-kallisto/src/kallisto-1.0.9 collected 95 items tests/test_alp.py ... [ 3%] tests/test_atom.py ...... [ 9%] tests/test_bonds.py ... [ 12%] tests/test_cli.py ........................................... [ 57%] tests/test_cns.py ... [ 61%] tests/test_eeq.py ... [ 64%] tests/test_exs.py .. [ 66%] tests/test_grid.py . [ 67%] tests/test_lig.py . [ 68%] tests/test_molecule.py ............ [ 81%] tests/test_prox.py .. [ 83%] tests/test_rms.py . [ 84%] tests/test_stm.py . [ 85%] tests/test_strucreader.py ..... [ 90%] tests/test_vdw.py ........ [ 98%] tests/test_version.py . [100%] ============================== 95 passed in 6.12s ============================== >>> py3-kallisto: Entering fakeroot... >>> py3-kallisto-pyc*: Running split function pyc... '/home/buildozer/aports/community/py3-kallisto/pkg/py3-kallisto/usr/lib/python3.11/site-packages/kallisto/reader/__pycache__' -> '/home/buildozer/aports/community/py3-kallisto/pkg/py3-kallisto-pyc/usr/lib/python3.11/site-packages/kallisto/reader/__pycache__' '/home/buildozer/aports/community/py3-kallisto/pkg/py3-kallisto/usr/lib/python3.11/site-packages/kallisto/data/__pycache__' -> '/home/buildozer/aports/community/py3-kallisto/pkg/py3-kallisto-pyc/usr/lib/python3.11/site-packages/kallisto/data/__pycache__' '/home/buildozer/aports/community/py3-kallisto/pkg/py3-kallisto/usr/lib/python3.11/site-packages/kallisto/utils/__pycache__' -> '/home/buildozer/aports/community/py3-kallisto/pkg/py3-kallisto-pyc/usr/lib/python3.11/site-packages/kallisto/utils/__pycache__' '/home/buildozer/aports/community/py3-kallisto/pkg/py3-kallisto/usr/lib/python3.11/site-packages/kallisto/__pycache__' -> '/home/buildozer/aports/community/py3-kallisto/pkg/py3-kallisto-pyc/usr/lib/python3.11/site-packages/kallisto/__pycache__' >>> py3-kallisto-pyc*: Preparing subpackage py3-kallisto-pyc... >>> py3-kallisto-pyc*: Running postcheck for py3-kallisto-pyc >>> py3-kallisto*: Running postcheck for py3-kallisto >>> py3-kallisto*: Preparing package py3-kallisto... >>> py3-kallisto-pyc*: Tracing dependencies... python3 py3-click py3-numpy py3-scipy python3~3.11 >>> py3-kallisto-pyc*: Package size: 708.0 KB >>> py3-kallisto-pyc*: Compressing data... >>> py3-kallisto-pyc*: Create checksum... >>> py3-kallisto-pyc*: Create py3-kallisto-pyc-1.0.9-r1.apk >>> py3-kallisto*: Tracing dependencies... python3 py3-click py3-numpy py3-scipy python3~3.11 >>> py3-kallisto*: Package size: 500.0 KB >>> py3-kallisto*: Compressing data... >>> py3-kallisto*: Create checksum... >>> py3-kallisto*: Create py3-kallisto-1.0.9-r1.apk >>> py3-kallisto: Build complete at Mon, 24 Apr 2023 01:58:39 +0000 elapsed time 0h 0m 20s >>> py3-kallisto: Cleaning up srcdir >>> py3-kallisto: Cleaning up pkgdir >>> py3-kallisto: Uninstalling dependencies... (1/67) Purging .makedepends-py3-kallisto (20230424.015821) (2/67) Purging py3-click-pyc (8.1.3-r2) (3/67) Purging py3-click (8.1.3-r2) (4/67) Purging py3-scipy (1.10.1-r0) (5/67) Purging py3-pooch (1.7.0-r0) (6/67) Purging py3-platformdirs (3.2.0-r0) (7/67) Purging py3-requests-pyc (2.28.2-r1) (8/67) Purging py3-requests (2.28.2-r1) (9/67) Purging py3-certifi-pyc (2022.12.7-r2) (10/67) Purging py3-certifi (2022.12.7-r2) (11/67) Purging py3-charset-normalizer-pyc (3.1.0-r1) (12/67) Purging py3-charset-normalizer (3.1.0-r1) (13/67) Purging py3-idna-pyc (3.4-r4) (14/67) Purging py3-idna (3.4-r4) (15/67) Purging py3-urllib3-pyc (1.26.15-r1) (16/67) Purging py3-urllib3 (1.26.15-r1) (17/67) Purging py3-numpy-f2py (1.24.2-r1) (18/67) Purging py3-numpy-pyc (1.24.2-r1) (19/67) Purging py3-numpy (1.24.2-r1) (20/67) Purging openblas (0.3.23-r0) (21/67) Purging py3-poetry-core (1.5.2-r0) (22/67) Purging py3-jsonschema-pyc (4.7.2-r4) (23/67) Purging py3-jsonschema (4.7.2-r4) (24/67) Purging py3-pyrsistent-pyc (0.19.3-r1) (25/67) Purging py3-pyrsistent (0.19.3-r1) (26/67) Purging py3-attrs-pyc (23.1.0-r1) (27/67) Purging py3-attrs (23.1.0-r1) (28/67) Purging py3-lark-parser-pyc (0.11.3-r3) (29/67) Purging py3-lark-parser (0.11.3-r3) (30/67) Purging py3-tomlkit-pyc (0.11.6-r2) (31/67) Purging py3-tomlkit (0.11.6-r2) (32/67) Purging py3-gpep517-pyc (13-r2) (33/67) Purging py3-gpep517 (13-r2) (34/67) Purging py3-installer-pyc (0.7.0-r1) (35/67) Purging py3-installer (0.7.0-r1) (36/67) Purging py3-wheel-pyc (0.40.0-r1) (37/67) Purging py3-wheel (0.40.0-r1) (38/67) Purging python3-dev (3.11.3-r10) (39/67) Purging py3-pytest-runner (6.0.0-r1) (40/67) Purging py3-pytest-pyc (7.3.1-r1) (41/67) Purging py3-pytest (7.3.1-r1) (42/67) Purging py3-iniconfig-pyc (1.1.1-r6) (43/67) Purging py3-iniconfig (1.1.1-r6) (44/67) Purging py3-pluggy-pyc (1.0.0-r3) (45/67) Purging py3-pluggy (1.0.0-r3) (46/67) Purging py3-py-pyc (1.11.0-r2) (47/67) Purging py3-py (1.11.0-r2) (48/67) Purging py3-setuptools-pyc (67.7.1-r0) (49/67) Purging py3-setuptools (67.7.1-r0) (50/67) Purging py3-packaging-pyc (23.1-r1) (51/67) Purging py3-packaging (23.1-r1) (52/67) Purging py3-parsing-pyc (3.0.9-r2) (53/67) Purging py3-parsing (3.0.9-r2) (54/67) Purging libgfortran (12.2.1_git20220924-r10) (55/67) Purging libquadmath (12.2.1_git20220924-r10) (56/67) Purging python3-pyc (3.11.3-r10) (57/67) Purging python3-pycache-pyc0 (3.11.3-r10) (58/67) Purging pyc (0.1-r0) (59/67) Purging python3 (3.11.3-r10) (60/67) Purging gdbm (1.23-r1) (61/67) Purging libbz2 (1.0.8-r5) (62/67) Purging libffi (3.4.4-r2) (63/67) Purging libpanelw (6.4_p20230401-r5) (64/67) Purging mpdecimal (2.5.1-r2) (65/67) Purging readline (8.2.1-r1) (66/67) Purging sqlite-libs (3.41.2-r2) (67/67) Purging xz-libs (5.4.2-r1) Executing busybox-1.36.0-r7.trigger OK: 392 MiB in 98 packages >>> py3-kallisto: Updating the community/x86_64 repository index... >>> py3-kallisto: Signing the index...