>>> py3-bioframe: Building community/py3-bioframe 0.6.4-r1 (using abuild 3.13.0-r3) started Thu, 25 Apr 2024 11:52:49 +0000 >>> py3-bioframe: Checking sanity of /home/buildozer/aports/community/py3-bioframe/APKBUILD... >>> py3-bioframe: Analyzing dependencies... >>> py3-bioframe: Installing for build: build-base py3-matplotlib py3-numpy py3-pandas py3-yaml py3-requests py3-typing-extensions py3-setuptools py3-gpep517 py3-hatchling py3-wheel py3-pytest-xdist (1/117) Installing libbz2 (1.0.8-r6) (2/117) Installing libffi (3.4.6-r0) (3/117) Installing gdbm (1.23-r1) (4/117) Installing xz-libs (5.6.1-r3) (5/117) Installing mpdecimal (4.0.0-r0) (6/117) Installing libpanelw (6.4_p20240330-r0) (7/117) Installing readline (8.2.10-r0) (8/117) Installing sqlite-libs (3.45.3-r0) (9/117) Installing python3 (3.12.3-r1) (10/117) Installing python3-pycache-pyc0 (3.12.3-r1) (11/117) Installing pyc (3.12.3-r1) (12/117) Installing py3-cairo-pyc (1.26.0-r1) (13/117) Installing py3-certifi (2024.2.2-r1) 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(0.42.0-r1) (104/117) Installing py3-wheel-pyc (0.42.0-r1) (105/117) Installing py3-apipkg (2.1.0-r3) (106/117) Installing py3-apipkg-pyc (2.1.0-r3) (107/117) Installing py3-execnet (1.9.0-r3) (108/117) Installing py3-execnet-pyc (1.9.0-r3) (109/117) Installing py3-iniconfig (2.0.0-r1) (110/117) Installing py3-iniconfig-pyc (2.0.0-r1) (111/117) Installing py3-py (1.11.0-r3) (112/117) Installing py3-py-pyc (1.11.0-r3) (113/117) Installing py3-pytest (8.1.1-r1) (114/117) Installing py3-pytest-pyc (8.1.1-r1) (115/117) Installing py3-pytest-xdist (3.5.0-r1) (116/117) Installing py3-pytest-xdist-pyc (3.5.0-r1) (117/117) Installing .makedepends-py3-bioframe (20240425.115251) Executing busybox-1.36.1-r25.trigger OK: 663 MiB in 223 packages >>> py3-bioframe: Cleaning up srcdir >>> py3-bioframe: Cleaning up pkgdir >>> py3-bioframe: Cleaning up tmpdir >>> py3-bioframe: Fetching https://distfiles.alpinelinux.org/distfiles/v3.20/bioframe-0.6.4.tar.gz Connecting to distfiles.alpinelinux.org (172.105.82.32:443) wget: server returned error: HTTP/1.1 404 Not Found >>> py3-bioframe: Fetching https://github.com/open2c/bioframe/archive/v0.6.4/bioframe-0.6.4.tar.gz Connecting to github.com (20.26.156.215:443) Connecting to codeload.github.com (20.26.156.216:443) saving to '/var/cache/distfiles/v3.20/bioframe-0.6.4.tar.gz.part' bioframe-0.6.4.tar.g 100% |********************************| 937k 0:00:00 ETA '/var/cache/distfiles/v3.20/bioframe-0.6.4.tar.gz.part' saved >>> py3-bioframe: Fetching https://distfiles.alpinelinux.org/distfiles/v3.20/bioframe-0.6.4.tar.gz >>> py3-bioframe: Checking sha512sums... bioframe-0.6.4.tar.gz: OK >>> py3-bioframe: Unpacking /var/cache/distfiles/v3.20/bioframe-0.6.4.tar.gz... 2024-04-25 11:52:55,171 gpep517 INFO Building wheel via backend hatchling.build 2024-04-25 11:52:55,237 gpep517 INFO The backend produced .dist/bioframe-0.6.4-py2.py3-none-any.whl bioframe-0.6.4-py2.py3-none-any.whl ============================= test session starts ============================== platform linux -- Python 3.12.3, pytest-8.1.1, pluggy-1.4.0 rootdir: /home/buildozer/aports/community/py3-bioframe/src/bioframe-0.6.4 configfile: pyproject.toml plugins: xdist-3.5.0 created: 8/8 workers 8 workers [59 items] .............s........s...............s.................... [100%] =============================== warnings summary =============================== tests/test_assembly_info.py: 6 warnings tests/test_resources.py: 10 warnings /usr/lib/python3.12/site-packages/pandas/core/computation/expr.py:557: DeprecationWarning: Attribute n is deprecated and will be removed in Python 3.14; use value instead return self.const_type(node.n, self.env) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ================== 56 passed, 3 skipped, 16 warnings in 6.75s ================== >>> py3-bioframe: Entering fakeroot... >>> py3-bioframe-pyc*: Running split function pyc... '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe/usr/lib/python3.12/site-packages/bioframe/sandbox/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/sandbox/__pycache__' '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe/usr/lib/python3.12/site-packages/bioframe/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/__pycache__' '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe/usr/lib/python3.12/site-packages/bioframe/io/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/io/__pycache__' '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe/usr/lib/python3.12/site-packages/bioframe/core/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/core/__pycache__' >>> py3-bioframe-pyc*: Preparing subpackage py3-bioframe-pyc... >>> py3-bioframe-pyc*: Running postcheck for py3-bioframe-pyc >>> py3-bioframe*: Running postcheck for py3-bioframe >>> py3-bioframe*: Preparing package py3-bioframe... >>> py3-bioframe-pyc*: Tracing dependencies... py3-matplotlib py3-numpy py3-pandas py3-yaml py3-requests py3-typing-extensions py3-setuptools python3~3.12 >>> py3-bioframe-pyc*: Package size: 320.0 KB >>> py3-bioframe-pyc*: Compressing data... >>> py3-bioframe-pyc*: Create checksum... >>> py3-bioframe-pyc*: Create py3-bioframe-pyc-0.6.4-r1.apk >>> py3-bioframe*: Tracing dependencies... py3-matplotlib py3-numpy py3-pandas py3-yaml py3-requests py3-typing-extensions py3-setuptools python3~3.12 >>> py3-bioframe*: Package size: 304.0 KB >>> py3-bioframe*: Compressing data... >>> py3-bioframe*: Create checksum... >>> py3-bioframe*: Create py3-bioframe-0.6.4-r1.apk >>> py3-bioframe: Build complete at Thu, 25 Apr 2024 11:53:02 +0000 elapsed time 0h 0m 13s >>> py3-bioframe: Cleaning up srcdir >>> py3-bioframe: Cleaning up pkgdir >>> py3-bioframe: Uninstalling dependencies... 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(2020.2-r3) (95/117) Purging readline (8.2.10-r0) (96/117) Purging sqlite-libs (3.45.3-r0) (97/117) Purging tiff (4.6.0t-r0) (98/117) Purging tk (8.6.14-r0) (99/117) Purging xz-libs (5.6.1-r3) (100/117) Purging yaml (0.2.5-r2) (101/117) Purging libxft (2.3.8-r3) (102/117) Purging fontconfig (2.15.0-r1) (103/117) Purging freetype (2.13.2-r0) (104/117) Purging libxrender (0.9.11-r5) (105/117) Purging libx11 (1.8.9-r1) (106/117) Purging libxcb (1.16.1-r0) (107/117) Purging libxdmcp (1.1.5-r1) (108/117) Purging libbsd (0.12.2-r0) (109/117) Purging libbz2 (1.0.8-r6) (110/117) Purging libjpeg-turbo (3.0.2-r0) (111/117) Purging libmd (1.1.0-r0) (112/117) Purging libpng (1.6.43-r0) (113/117) Purging libwebp (1.3.2-r0) (114/117) Purging libsharpyuv (1.3.2-r0) (115/117) Purging libxau (1.0.11-r4) (116/117) Purging tcl (8.6.14-r0) (117/117) Purging tzdata (2024a-r1) Executing busybox-1.36.1-r25.trigger OK: 435 MiB in 106 packages >>> py3-bioframe: Updating the community/s390x repository index... >>> py3-bioframe: Signing the index...