>>> py3-biopython: Building community/py3-biopython 1.85-r0 (using abuild 3.15.0_rc3-r1) started Sun, 04 May 2025 04:54:25 +0000
>>> py3-biopython: Validating /home/buildozer/aports/community/py3-biopython/APKBUILD...
>>> WARNING: py3-biopython: No maintainer
>>> py3-biopython: Analyzing dependencies...
>>> py3-biopython: Installing for build: build-base py3-numpy python3 py3-gpep517 py3-setuptools py3-wheel py3-numpy-dev python3-dev
(1/30) Installing openblas (0.3.28-r0)
(2/30) Installing libbz2 (1.0.8-r6)
(3/30) Installing libffi (3.4.8-r0)
(4/30) Installing gdbm (1.24-r0)
(5/30) Installing xz-libs (5.8.1-r0)
(6/30) Installing mpdecimal (4.0.0-r0)
(7/30) Installing libpanelw (6.5_p20250412-r0)
(8/30) Installing sqlite-libs (3.49.1-r1)
(9/30) Installing python3 (3.12.10-r0)
(10/30) Installing python3-pycache-pyc0 (3.12.10-r0)
(11/30) Installing pyc (3.12.10-r0)
(12/30) Installing py3-numpy-pyc (2.2.4-r0)
(13/30) Installing python3-pyc (3.12.10-r0)
(14/30) Installing py3-numpy (2.2.4-r0)
(15/30) Installing py3-numpy-tests (2.2.4-r0)
(16/30) Installing py3-installer (0.7.0-r2)
(17/30) Installing py3-installer-pyc (0.7.0-r2)
(18/30) Installing py3-gpep517 (16-r0)
(19/30) Installing py3-gpep517-pyc (16-r0)
(20/30) Installing py3-parsing (3.2.0-r0)
(21/30) Installing py3-parsing-pyc (3.2.0-r0)
(22/30) Installing py3-packaging (25.0-r0)
(23/30) Installing py3-packaging-pyc (25.0-r0)
(24/30) Installing py3-setuptools (77.0.3-r0)
(25/30) Installing py3-setuptools-pyc (77.0.3-r0)
(26/30) Installing py3-wheel (0.43.0-r0)
(27/30) Installing py3-wheel-pyc (0.43.0-r0)
(28/30) Installing py3-numpy-dev (2.2.4-r0)
(29/30) Installing python3-dev (3.12.10-r0)
(30/30) Installing .makedepends-py3-biopython (20250504.045430)
Executing busybox-1.37.0-r16.trigger
OK: 586 MiB in 129 packages
>>> py3-biopython: Cleaning up srcdir
>>> py3-biopython: Cleaning up pkgdir
>>> py3-biopython: Cleaning up tmpdir
>>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/v3.22/biopython-1.85.tar.gz
Connecting to distfiles.alpinelinux.org (172.105.82.32:443)
saving to '/var/cache/distfiles/v3.22/biopython-1.85.tar.gz.part'
biopython-1.85.tar.g  31% |**********                      | 6127k  0:00:02 ETA
biopython-1.85.tar.g 100% |********************************| 18.9M  0:00:00 ETA
'/var/cache/distfiles/v3.22/biopython-1.85.tar.gz.part' saved
>>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/v3.22/biopython-1.85.tar.gz
>>> py3-biopython: Checking sha512sums...
biopython-1.85.tar.gz: OK
>>> py3-biopython: Unpacking /var/cache/distfiles/v3.22/biopython-1.85.tar.gz...
2025-05-04 04:54:39,438 gpep517 INFO Building wheel via backend setuptools.build_meta:__legacy__
/usr/lib/python3.12/site-packages/setuptools/dist.py:760: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!

        ********************************************************************************
        Please consider removing the following classifiers in favor of a SPDX license expression:

        License :: Freely Distributable

        See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
        ********************************************************************************

!!
  self._finalize_license_expression()
2025-05-04 04:54:39,566 root INFO running bdist_wheel
2025-05-04 04:54:39,648 root INFO running build
2025-05-04 04:54:39,649 root INFO running build_py
2025-05-04 04:54:39,668 root INFO creating build/lib.linux-riscv64-cpython-312/Bio
2025-05-04 04:54:39,670 root INFO copying Bio/kNN.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-05-04 04:54:39,672 root INFO copying Bio/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-05-04 04:54:39,674 root INFO copying Bio/MarkovModel.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-05-04 04:54:39,676 root INFO copying Bio/SeqRecord.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-05-04 04:54:39,679 root INFO copying Bio/pairwise2.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-05-04 04:54:39,682 root INFO copying Bio/File.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-05-04 04:54:39,684 root INFO copying Bio/NaiveBayes.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-05-04 04:54:39,686 root INFO copying Bio/_utils.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-05-04 04:54:39,688 root INFO copying Bio/Seq.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-05-04 04:54:39,690 root INFO copying Bio/SeqFeature.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-05-04 04:54:39,693 root INFO copying Bio/bgzf.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-05-04 04:54:39,695 root INFO copying Bio/MaxEntropy.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-05-04 04:54:39,696 root INFO copying Bio/LogisticRegression.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-05-04 04:54:39,699 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Affy
2025-05-04 04:54:39,700 root INFO copying Bio/Affy/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Affy
2025-05-04 04:54:39,701 root INFO copying Bio/Affy/CelFile.py -> build/lib.linux-riscv64-cpython-312/Bio/Affy
2025-05-04 04:54:39,705 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,706 root INFO copying Bio/Align/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,708 root INFO copying Bio/Align/clustal.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,710 root INFO copying Bio/Align/hhr.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,712 root INFO copying Bio/Align/bigmaf.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,714 root INFO copying Bio/Align/exonerate.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,716 root INFO copying Bio/Align/AlignInfo.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,717 root INFO copying Bio/Align/sam.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,719 root INFO copying Bio/Align/stockholm.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,721 root INFO copying Bio/Align/tabular.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,723 root INFO copying Bio/Align/a2m.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,725 root INFO copying Bio/Align/bigbed.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,727 root INFO copying Bio/Align/nexus.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,729 root INFO copying Bio/Align/analysis.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,731 root INFO copying Bio/Align/bigpsl.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,733 root INFO copying Bio/Align/mauve.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,734 root INFO copying Bio/Align/psl.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,737 root INFO copying Bio/Align/maf.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,738 root INFO copying Bio/Align/bed.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,740 root INFO copying Bio/Align/phylip.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,742 root INFO copying Bio/Align/msf.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,744 root INFO copying Bio/Align/chain.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,745 root INFO copying Bio/Align/emboss.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,747 root INFO copying Bio/Align/fasta.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,749 root INFO copying Bio/Align/interfaces.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:39,751 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-05-04 04:54:39,753 root INFO copying Bio/Align/Applications/_Dialign.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-05-04 04:54:39,754 root INFO copying Bio/Align/Applications/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-05-04 04:54:39,756 root INFO copying Bio/Align/Applications/_ClustalOmega.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-05-04 04:54:39,758 root INFO copying Bio/Align/Applications/_TCoffee.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-05-04 04:54:39,759 root INFO copying Bio/Align/Applications/_MSAProbs.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-05-04 04:54:39,761 root INFO copying Bio/Align/Applications/_Prank.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-05-04 04:54:39,763 root INFO copying Bio/Align/Applications/_Muscle.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-05-04 04:54:39,765 root INFO copying Bio/Align/Applications/_Probcons.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-05-04 04:54:39,767 root INFO copying Bio/Align/Applications/_Clustalw.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-05-04 04:54:39,768 root INFO copying Bio/Align/Applications/_Mafft.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-05-04 04:54:39,771 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices
2025-05-04 04:54:39,772 root INFO copying Bio/Align/substitution_matrices/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices
2025-05-04 04:54:39,774 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-05-04 04:54:39,776 root INFO copying Bio/AlignIO/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-05-04 04:54:39,777 root INFO copying Bio/AlignIO/MauveIO.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-05-04 04:54:39,779 root INFO copying Bio/AlignIO/ClustalIO.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-05-04 04:54:39,781 root INFO copying Bio/AlignIO/StockholmIO.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-05-04 04:54:39,783 root INFO copying Bio/AlignIO/Interfaces.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-05-04 04:54:39,785 root INFO copying Bio/AlignIO/EmbossIO.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-05-04 04:54:39,786 root INFO copying Bio/AlignIO/FastaIO.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-05-04 04:54:39,788 root INFO copying Bio/AlignIO/NexusIO.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-05-04 04:54:39,790 root INFO copying Bio/AlignIO/MafIO.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-05-04 04:54:39,792 root INFO copying Bio/AlignIO/MsfIO.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-05-04 04:54:39,794 root INFO copying Bio/AlignIO/PhylipIO.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-05-04 04:54:39,796 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Alphabet
2025-05-04 04:54:39,797 root INFO copying Bio/Alphabet/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Alphabet
2025-05-04 04:54:39,799 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Application
2025-05-04 04:54:39,800 root INFO copying Bio/Application/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Application
2025-05-04 04:54:39,802 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Blast
2025-05-04 04:54:39,804 root INFO copying Bio/Blast/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Blast
2025-05-04 04:54:39,805 root INFO copying Bio/Blast/NCBIXML.py -> build/lib.linux-riscv64-cpython-312/Bio/Blast
2025-05-04 04:54:39,808 root INFO copying Bio/Blast/Applications.py -> build/lib.linux-riscv64-cpython-312/Bio/Blast
2025-05-04 04:54:39,810 root INFO copying Bio/Blast/_writers.py -> build/lib.linux-riscv64-cpython-312/Bio/Blast
2025-05-04 04:54:39,812 root INFO copying Bio/Blast/_parser.py -> build/lib.linux-riscv64-cpython-312/Bio/Blast
2025-05-04 04:54:39,814 root INFO copying Bio/Blast/NCBIWWW.py -> build/lib.linux-riscv64-cpython-312/Bio/Blast
2025-05-04 04:54:39,816 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/CAPS
2025-05-04 04:54:39,817 root INFO copying Bio/CAPS/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/CAPS
2025-05-04 04:54:39,820 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Cluster
2025-05-04 04:54:39,821 root INFO copying Bio/Cluster/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Cluster
2025-05-04 04:54:39,823 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/codonalign
2025-05-04 04:54:39,824 root INFO copying Bio/codonalign/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/codonalign
2025-05-04 04:54:39,826 root INFO copying Bio/codonalign/codonalignment.py -> build/lib.linux-riscv64-cpython-312/Bio/codonalign
2025-05-04 04:54:39,828 root INFO copying Bio/codonalign/codonseq.py -> build/lib.linux-riscv64-cpython-312/Bio/codonalign
2025-05-04 04:54:39,830 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Compass
2025-05-04 04:54:39,831 root INFO copying Bio/Compass/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Compass
2025-05-04 04:54:39,833 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Data
2025-05-04 04:54:39,834 root INFO copying Bio/Data/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Data
2025-05-04 04:54:39,836 root INFO copying Bio/Data/PDBData.py -> build/lib.linux-riscv64-cpython-312/Bio/Data
2025-05-04 04:54:39,838 root INFO copying Bio/Data/IUPACData.py -> build/lib.linux-riscv64-cpython-312/Bio/Data
2025-05-04 04:54:39,840 root INFO copying Bio/Data/CodonTable.py -> build/lib.linux-riscv64-cpython-312/Bio/Data
2025-05-04 04:54:39,842 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Emboss
2025-05-04 04:54:39,843 root INFO copying Bio/Emboss/PrimerSearch.py -> build/lib.linux-riscv64-cpython-312/Bio/Emboss
2025-05-04 04:54:39,845 root INFO copying Bio/Emboss/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Emboss
2025-05-04 04:54:39,847 root INFO copying Bio/Emboss/Applications.py -> build/lib.linux-riscv64-cpython-312/Bio/Emboss
2025-05-04 04:54:39,849 root INFO copying Bio/Emboss/Primer3.py -> build/lib.linux-riscv64-cpython-312/Bio/Emboss
2025-05-04 04:54:39,851 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Entrez
2025-05-04 04:54:39,852 root INFO copying Bio/Entrez/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Entrez
2025-05-04 04:54:39,854 root INFO copying Bio/Entrez/Parser.py -> build/lib.linux-riscv64-cpython-312/Bio/Entrez
2025-05-04 04:54:39,856 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/ExPASy
2025-05-04 04:54:39,857 root INFO copying Bio/ExPASy/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/ExPASy
2025-05-04 04:54:39,859 root INFO copying Bio/ExPASy/Prodoc.py -> build/lib.linux-riscv64-cpython-312/Bio/ExPASy
2025-05-04 04:54:39,861 root INFO copying Bio/ExPASy/Prosite.py -> build/lib.linux-riscv64-cpython-312/Bio/ExPASy
2025-05-04 04:54:39,863 root INFO copying Bio/ExPASy/cellosaurus.py -> build/lib.linux-riscv64-cpython-312/Bio/ExPASy
2025-05-04 04:54:39,864 root INFO copying Bio/ExPASy/ScanProsite.py -> build/lib.linux-riscv64-cpython-312/Bio/ExPASy
2025-05-04 04:54:39,866 root INFO copying Bio/ExPASy/Enzyme.py -> build/lib.linux-riscv64-cpython-312/Bio/ExPASy
2025-05-04 04:54:39,868 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/GenBank
2025-05-04 04:54:39,869 root INFO copying Bio/GenBank/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/GenBank
2025-05-04 04:54:39,871 root INFO copying Bio/GenBank/Scanner.py -> build/lib.linux-riscv64-cpython-312/Bio/GenBank
2025-05-04 04:54:39,874 root INFO copying Bio/GenBank/utils.py -> build/lib.linux-riscv64-cpython-312/Bio/GenBank
2025-05-04 04:54:39,876 root INFO copying Bio/GenBank/Record.py -> build/lib.linux-riscv64-cpython-312/Bio/GenBank
2025-05-04 04:54:39,878 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Geo
2025-05-04 04:54:39,879 root INFO copying Bio/Geo/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Geo
2025-05-04 04:54:39,881 root INFO copying Bio/Geo/Record.py -> build/lib.linux-riscv64-cpython-312/Bio/Geo
2025-05-04 04:54:39,883 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Graphics
2025-05-04 04:54:39,884 root INFO copying Bio/Graphics/KGML_vis.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics
2025-05-04 04:54:39,886 root INFO copying Bio/Graphics/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics
2025-05-04 04:54:39,888 root INFO copying Bio/Graphics/BasicChromosome.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics
2025-05-04 04:54:39,890 root INFO copying Bio/Graphics/Comparative.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics
2025-05-04 04:54:39,891 root INFO copying Bio/Graphics/DisplayRepresentation.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics
2025-05-04 04:54:39,893 root INFO copying Bio/Graphics/Distribution.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics
2025-05-04 04:54:39,895 root INFO copying Bio/Graphics/ColorSpiral.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics
2025-05-04 04:54:39,898 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-05-04 04:54:39,899 root INFO copying Bio/Graphics/GenomeDiagram/_Track.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-05-04 04:54:39,900 root INFO copying Bio/Graphics/GenomeDiagram/_Diagram.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-05-04 04:54:39,902 root INFO copying Bio/Graphics/GenomeDiagram/_Graph.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-05-04 04:54:39,904 root INFO copying Bio/Graphics/GenomeDiagram/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-05-04 04:54:39,906 root INFO copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-05-04 04:54:39,908 root INFO copying Bio/Graphics/GenomeDiagram/_Feature.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-05-04 04:54:39,909 root INFO copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-05-04 04:54:39,911 root INFO copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-05-04 04:54:39,913 root INFO copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-05-04 04:54:39,915 root INFO copying Bio/Graphics/GenomeDiagram/_Colors.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-05-04 04:54:39,917 root INFO copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-05-04 04:54:39,919 root INFO copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-05-04 04:54:39,921 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/HMM
2025-05-04 04:54:39,922 root INFO copying Bio/HMM/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/HMM
2025-05-04 04:54:39,924 root INFO copying Bio/HMM/MarkovModel.py -> build/lib.linux-riscv64-cpython-312/Bio/HMM
2025-05-04 04:54:39,926 root INFO copying Bio/HMM/DynamicProgramming.py -> build/lib.linux-riscv64-cpython-312/Bio/HMM
2025-05-04 04:54:39,928 root INFO copying Bio/HMM/Utilities.py -> build/lib.linux-riscv64-cpython-312/Bio/HMM
2025-05-04 04:54:39,929 root INFO copying Bio/HMM/Trainer.py -> build/lib.linux-riscv64-cpython-312/Bio/HMM
2025-05-04 04:54:39,932 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/KEGG
2025-05-04 04:54:39,933 root INFO copying Bio/KEGG/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/KEGG
2025-05-04 04:54:39,934 root INFO copying Bio/KEGG/REST.py -> build/lib.linux-riscv64-cpython-312/Bio/KEGG
2025-05-04 04:54:39,937 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/KEGG/Compound
2025-05-04 04:54:39,938 root INFO copying Bio/KEGG/Compound/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/KEGG/Compound
2025-05-04 04:54:39,940 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/KEGG/Enzyme
2025-05-04 04:54:39,941 root INFO copying Bio/KEGG/Enzyme/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/KEGG/Enzyme
2025-05-04 04:54:39,943 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/KEGG/Gene
2025-05-04 04:54:39,944 root INFO copying Bio/KEGG/Gene/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/KEGG/Gene
2025-05-04 04:54:39,946 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/KEGG/Map
2025-05-04 04:54:39,947 root INFO copying Bio/KEGG/Map/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/KEGG/Map
2025-05-04 04:54:39,949 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/PDB/mmtf
2025-05-04 04:54:39,951 root INFO copying Bio/PDB/mmtf/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB/mmtf
2025-05-04 04:54:39,952 root INFO copying Bio/PDB/mmtf/mmtfio.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB/mmtf
2025-05-04 04:54:39,954 root INFO copying Bio/PDB/mmtf/DefaultParser.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB/mmtf
2025-05-04 04:54:39,956 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/KEGG/KGML
2025-05-04 04:54:39,957 root INFO copying Bio/KEGG/KGML/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/KEGG/KGML
2025-05-04 04:54:39,959 root INFO copying Bio/KEGG/KGML/KGML_pathway.py -> build/lib.linux-riscv64-cpython-312/Bio/KEGG/KGML
2025-05-04 04:54:39,961 root INFO copying Bio/KEGG/KGML/KGML_parser.py -> build/lib.linux-riscv64-cpython-312/Bio/KEGG/KGML
2025-05-04 04:54:39,963 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Medline
2025-05-04 04:54:39,964 root INFO copying Bio/Medline/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Medline
2025-05-04 04:54:39,967 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-05-04 04:54:39,968 root INFO copying Bio/motifs/meme.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-05-04 04:54:39,970 root INFO copying Bio/motifs/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-05-04 04:54:39,972 root INFO copying Bio/motifs/pfm.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-05-04 04:54:39,973 root INFO copying Bio/motifs/matrix.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-05-04 04:54:39,975 root INFO copying Bio/motifs/transfac.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-05-04 04:54:39,977 root INFO copying Bio/motifs/alignace.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-05-04 04:54:39,979 root INFO copying Bio/motifs/minimal.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-05-04 04:54:39,981 root INFO copying Bio/motifs/clusterbuster.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-05-04 04:54:39,982 root INFO copying Bio/motifs/mast.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-05-04 04:54:39,984 root INFO copying Bio/motifs/thresholds.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-05-04 04:54:39,986 root INFO copying Bio/motifs/xms.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-05-04 04:54:39,988 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/motifs/applications
2025-05-04 04:54:39,989 root INFO copying Bio/motifs/applications/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs/applications
2025-05-04 04:54:39,991 root INFO copying Bio/motifs/applications/_xxmotif.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs/applications
2025-05-04 04:54:39,993 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/motifs/jaspar
2025-05-04 04:54:39,994 root INFO copying Bio/motifs/jaspar/db.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs/jaspar
2025-05-04 04:54:39,996 root INFO copying Bio/motifs/jaspar/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs/jaspar
2025-05-04 04:54:39,998 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Nexus
2025-05-04 04:54:39,999 root INFO copying Bio/Nexus/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Nexus
2025-05-04 04:54:40,001 root INFO copying Bio/Nexus/Nodes.py -> build/lib.linux-riscv64-cpython-312/Bio/Nexus
2025-05-04 04:54:40,002 root INFO copying Bio/Nexus/Nexus.py -> build/lib.linux-riscv64-cpython-312/Bio/Nexus
2025-05-04 04:54:40,005 root INFO copying Bio/Nexus/Trees.py -> build/lib.linux-riscv64-cpython-312/Bio/Nexus
2025-05-04 04:54:40,007 root INFO copying Bio/Nexus/StandardData.py -> build/lib.linux-riscv64-cpython-312/Bio/Nexus
2025-05-04 04:54:40,009 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/NMR
2025-05-04 04:54:40,010 root INFO copying Bio/NMR/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/NMR
2025-05-04 04:54:40,012 root INFO copying Bio/NMR/xpktools.py -> build/lib.linux-riscv64-cpython-312/Bio/NMR
2025-05-04 04:54:40,013 root INFO copying Bio/NMR/NOEtools.py -> build/lib.linux-riscv64-cpython-312/Bio/NMR
2025-05-04 04:54:40,016 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Pathway
2025-05-04 04:54:40,017 root INFO copying Bio/Pathway/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Pathway
2025-05-04 04:54:40,019 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Pathway/Rep
2025-05-04 04:54:40,020 root INFO copying Bio/Pathway/Rep/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Pathway/Rep
2025-05-04 04:54:40,022 root INFO copying Bio/Pathway/Rep/Graph.py -> build/lib.linux-riscv64-cpython-312/Bio/Pathway/Rep
2025-05-04 04:54:40,023 root INFO copying Bio/Pathway/Rep/MultiGraph.py -> build/lib.linux-riscv64-cpython-312/Bio/Pathway/Rep
2025-05-04 04:54:40,028 root INFO copying Bio/PDB/Superimposer.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,030 root INFO copying Bio/PDB/binary_cif.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,031 root INFO copying Bio/PDB/Selection.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,033 root INFO copying Bio/PDB/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,035 root INFO copying Bio/PDB/MMCIF2Dict.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,036 root INFO copying Bio/PDB/SCADIO.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,038 root INFO copying Bio/PDB/alphafold_db.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,040 root INFO copying Bio/PDB/PICIO.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,042 root INFO copying Bio/PDB/internal_coords.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,045 root INFO copying Bio/PDB/NACCESS.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,047 root INFO copying Bio/PDB/Residue.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,049 root INFO copying Bio/PDB/vectors.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,050 root INFO copying Bio/PDB/parse_pdb_header.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,052 root INFO copying Bio/PDB/StructureAlignment.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,054 root INFO copying Bio/PDB/mmcifio.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,056 root INFO copying Bio/PDB/Polypeptide.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,057 root INFO copying Bio/PDB/cealign.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,059 root INFO copying Bio/PDB/DSSP.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,061 root INFO copying Bio/PDB/PDBMLParser.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,063 root INFO copying Bio/PDB/Chain.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,065 root INFO copying Bio/PDB/PSEA.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,066 root INFO copying Bio/PDB/qcprot.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,068 root INFO copying Bio/PDB/ic_data.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,070 root INFO copying Bio/PDB/Dice.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,072 root INFO copying Bio/PDB/StructureBuilder.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,074 root INFO copying Bio/PDB/SASA.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,076 root INFO copying Bio/PDB/AbstractPropertyMap.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,077 root INFO copying Bio/PDB/FragmentMapper.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,079 root INFO copying Bio/PDB/Model.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,081 root INFO copying Bio/PDB/ic_rebuild.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,083 root INFO copying Bio/PDB/Entity.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,084 root INFO copying Bio/PDB/NeighborSearch.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,086 root INFO copying Bio/PDB/MMCIFParser.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,088 root INFO copying Bio/PDB/HSExposure.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,090 root INFO copying Bio/PDB/Atom.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,092 root INFO copying Bio/PDB/PDBExceptions.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,093 root INFO copying Bio/PDB/PDBIO.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,095 root INFO copying Bio/PDB/PDBParser.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,097 root INFO copying Bio/PDB/PDBList.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,099 root INFO copying Bio/PDB/Structure.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,101 root INFO copying Bio/PDB/ResidueDepth.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:40,103 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/phenotype
2025-05-04 04:54:40,104 root INFO copying Bio/phenotype/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/phenotype
2025-05-04 04:54:40,106 root INFO copying Bio/phenotype/pm_fitting.py -> build/lib.linux-riscv64-cpython-312/Bio/phenotype
2025-05-04 04:54:40,108 root INFO copying Bio/phenotype/phen_micro.py -> build/lib.linux-riscv64-cpython-312/Bio/phenotype
2025-05-04 04:54:40,110 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/PopGen
2025-05-04 04:54:40,111 root INFO copying Bio/PopGen/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/PopGen
2025-05-04 04:54:40,113 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop
2025-05-04 04:54:40,114 root INFO copying Bio/PopGen/GenePop/LargeFileParser.py -> build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop
2025-05-04 04:54:40,116 root INFO copying Bio/PopGen/GenePop/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop
2025-05-04 04:54:40,118 root INFO copying Bio/PopGen/GenePop/EasyController.py -> build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop
2025-05-04 04:54:40,120 root INFO copying Bio/PopGen/GenePop/Controller.py -> build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop
2025-05-04 04:54:40,122 root INFO copying Bio/PopGen/GenePop/FileParser.py -> build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop
2025-05-04 04:54:40,125 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Restriction
2025-05-04 04:54:40,126 root INFO copying Bio/Restriction/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Restriction
2025-05-04 04:54:40,127 root INFO copying Bio/Restriction/PrintFormat.py -> build/lib.linux-riscv64-cpython-312/Bio/Restriction
2025-05-04 04:54:40,129 root INFO copying Bio/Restriction/Restriction.py -> build/lib.linux-riscv64-cpython-312/Bio/Restriction
2025-05-04 04:54:40,131 root INFO copying Bio/Restriction/Restriction_Dictionary.py -> build/lib.linux-riscv64-cpython-312/Bio/Restriction
2025-05-04 04:54:40,137 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SCOP
2025-05-04 04:54:40,138 root INFO copying Bio/SCOP/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SCOP
2025-05-04 04:54:40,141 root INFO copying Bio/SCOP/Des.py -> build/lib.linux-riscv64-cpython-312/Bio/SCOP
2025-05-04 04:54:40,142 root INFO copying Bio/SCOP/Hie.py -> build/lib.linux-riscv64-cpython-312/Bio/SCOP
2025-05-04 04:54:40,144 root INFO copying Bio/SCOP/Cla.py -> build/lib.linux-riscv64-cpython-312/Bio/SCOP
2025-05-04 04:54:40,146 root INFO copying Bio/SCOP/Dom.py -> build/lib.linux-riscv64-cpython-312/Bio/SCOP
2025-05-04 04:54:40,148 root INFO copying Bio/SCOP/Residues.py -> build/lib.linux-riscv64-cpython-312/Bio/SCOP
2025-05-04 04:54:40,150 root INFO copying Bio/SCOP/Raf.py -> build/lib.linux-riscv64-cpython-312/Bio/SCOP
2025-05-04 04:54:40,152 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SearchIO
2025-05-04 04:54:40,153 root INFO copying Bio/SearchIO/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO
2025-05-04 04:54:40,156 root INFO copying Bio/SearchIO/_index.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO
2025-05-04 04:54:40,157 root INFO copying Bio/SearchIO/_utils.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO
2025-05-04 04:54:40,159 root INFO copying Bio/SearchIO/FastaIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO
2025-05-04 04:54:40,161 root INFO copying Bio/SearchIO/BlatIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO
2025-05-04 04:54:40,164 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model
2025-05-04 04:54:40,165 root INFO copying Bio/SearchIO/_model/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model
2025-05-04 04:54:40,167 root INFO copying Bio/SearchIO/_model/hit.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model
2025-05-04 04:54:40,169 root INFO copying Bio/SearchIO/_model/_base.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model
2025-05-04 04:54:40,171 root INFO copying Bio/SearchIO/_model/query.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model
2025-05-04 04:54:40,173 root INFO copying Bio/SearchIO/_model/hsp.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model
2025-05-04 04:54:40,175 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SearchIO/BlastIO
2025-05-04 04:54:40,176 root INFO copying Bio/SearchIO/BlastIO/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/BlastIO
2025-05-04 04:54:40,178 root INFO copying Bio/SearchIO/BlastIO/blast_tab.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/BlastIO
2025-05-04 04:54:40,180 root INFO copying Bio/SearchIO/BlastIO/blast_xml.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/BlastIO
2025-05-04 04:54:40,182 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HHsuiteIO
2025-05-04 04:54:40,183 root INFO copying Bio/SearchIO/HHsuiteIO/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HHsuiteIO
2025-05-04 04:54:40,185 root INFO copying Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HHsuiteIO
2025-05-04 04:54:40,188 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO
2025-05-04 04:54:40,189 root INFO copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO
2025-05-04 04:54:40,190 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO
2025-05-04 04:54:40,192 root INFO copying Bio/SearchIO/HmmerIO/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO
2025-05-04 04:54:40,194 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO
2025-05-04 04:54:40,196 root INFO copying Bio/SearchIO/HmmerIO/_base.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO
2025-05-04 04:54:40,197 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO
2025-05-04 04:54:40,200 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO
2025-05-04 04:54:40,201 root INFO copying Bio/SearchIO/ExonerateIO/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO
2025-05-04 04:54:40,203 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO
2025-05-04 04:54:40,204 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO
2025-05-04 04:54:40,206 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO
2025-05-04 04:54:40,208 root INFO copying Bio/SearchIO/ExonerateIO/_base.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO
2025-05-04 04:54:40,210 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SearchIO/InterproscanIO
2025-05-04 04:54:40,212 root INFO copying Bio/SearchIO/InterproscanIO/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/InterproscanIO
2025-05-04 04:54:40,213 root INFO copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/InterproscanIO
2025-05-04 04:54:40,216 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,218 root INFO copying Bio/SeqIO/UniprotIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,219 root INFO copying Bio/SeqIO/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,221 root INFO copying Bio/SeqIO/_index.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,223 root INFO copying Bio/SeqIO/XdnaIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,225 root INFO copying Bio/SeqIO/SnapGeneIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,227 root INFO copying Bio/SeqIO/PhdIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,229 root INFO copying Bio/SeqIO/TwoBitIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,230 root INFO copying Bio/SeqIO/IgIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,232 root INFO copying Bio/SeqIO/SeqXmlIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,234 root INFO copying Bio/SeqIO/Interfaces.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,236 root INFO copying Bio/SeqIO/TabIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,238 root INFO copying Bio/SeqIO/FastaIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,240 root INFO copying Bio/SeqIO/SwissIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,241 root INFO copying Bio/SeqIO/NibIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,243 root INFO copying Bio/SeqIO/SffIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,245 root INFO copying Bio/SeqIO/AbiIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,247 root INFO copying Bio/SeqIO/PdbIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,249 root INFO copying Bio/SeqIO/AceIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,251 root INFO copying Bio/SeqIO/QualityIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,253 root INFO copying Bio/SeqIO/GckIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,255 root INFO copying Bio/SeqIO/GfaIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,257 root INFO copying Bio/SeqIO/PirIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,259 root INFO copying Bio/SeqIO/InsdcIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:40,261 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SeqUtils
2025-05-04 04:54:40,262 root INFO copying Bio/SeqUtils/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqUtils
2025-05-04 04:54:40,264 root INFO copying Bio/SeqUtils/IsoelectricPoint.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqUtils
2025-05-04 04:54:40,266 root INFO copying Bio/SeqUtils/lcc.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqUtils
2025-05-04 04:54:40,268 root INFO copying Bio/SeqUtils/ProtParamData.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqUtils
2025-05-04 04:54:40,270 root INFO copying Bio/SeqUtils/CheckSum.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqUtils
2025-05-04 04:54:40,271 root INFO copying Bio/SeqUtils/MeltingTemp.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqUtils
2025-05-04 04:54:40,273 root INFO copying Bio/SeqUtils/ProtParam.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqUtils
2025-05-04 04:54:40,276 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Sequencing
2025-05-04 04:54:40,277 root INFO copying Bio/Sequencing/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Sequencing
2025-05-04 04:54:40,278 root INFO copying Bio/Sequencing/Phd.py -> build/lib.linux-riscv64-cpython-312/Bio/Sequencing
2025-05-04 04:54:40,280 root INFO copying Bio/Sequencing/Ace.py -> build/lib.linux-riscv64-cpython-312/Bio/Sequencing
2025-05-04 04:54:40,283 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Applications
2025-05-04 04:54:40,284 root INFO copying Bio/Sequencing/Applications/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Applications
2025-05-04 04:54:40,285 root INFO copying Bio/Sequencing/Applications/_Novoalign.py -> build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Applications
2025-05-04 04:54:40,287 root INFO copying Bio/Sequencing/Applications/_samtools.py -> build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Applications
2025-05-04 04:54:40,289 root INFO copying Bio/Sequencing/Applications/_bwa.py -> build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Applications
2025-05-04 04:54:40,293 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SVDSuperimposer
2025-05-04 04:54:40,294 root INFO copying Bio/SVDSuperimposer/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SVDSuperimposer
2025-05-04 04:54:40,296 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SwissProt
2025-05-04 04:54:40,297 root INFO copying Bio/SwissProt/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SwissProt
2025-05-04 04:54:40,299 root INFO copying Bio/SwissProt/KeyWList.py -> build/lib.linux-riscv64-cpython-312/Bio/SwissProt
2025-05-04 04:54:40,301 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/TogoWS
2025-05-04 04:54:40,302 root INFO copying Bio/TogoWS/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/TogoWS
2025-05-04 04:54:40,305 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-05-04 04:54:40,306 root INFO copying Bio/Phylo/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-05-04 04:54:40,308 root INFO copying Bio/Phylo/BaseTree.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-05-04 04:54:40,310 root INFO copying Bio/Phylo/CDAOIO.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-05-04 04:54:40,312 root INFO copying Bio/Phylo/PhyloXMLIO.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-05-04 04:54:40,313 root INFO copying Bio/Phylo/_cdao_owl.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-05-04 04:54:40,316 root INFO copying Bio/Phylo/Consensus.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-05-04 04:54:40,318 root INFO copying Bio/Phylo/Newick.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-05-04 04:54:40,320 root INFO copying Bio/Phylo/_utils.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-05-04 04:54:40,322 root INFO copying Bio/Phylo/TreeConstruction.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-05-04 04:54:40,324 root INFO copying Bio/Phylo/_io.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-05-04 04:54:40,325 root INFO copying Bio/Phylo/PhyloXML.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-05-04 04:54:40,327 root INFO copying Bio/Phylo/NeXMLIO.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-05-04 04:54:40,329 root INFO copying Bio/Phylo/CDAO.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-05-04 04:54:40,331 root INFO copying Bio/Phylo/NeXML.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-05-04 04:54:40,332 root INFO copying Bio/Phylo/NexusIO.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-05-04 04:54:40,334 root INFO copying Bio/Phylo/NewickIO.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-05-04 04:54:40,336 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Phylo/Applications
2025-05-04 04:54:40,338 root INFO copying Bio/Phylo/Applications/_Raxml.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/Applications
2025-05-04 04:54:40,339 root INFO copying Bio/Phylo/Applications/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/Applications
2025-05-04 04:54:40,341 root INFO copying Bio/Phylo/Applications/_Fasttree.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/Applications
2025-05-04 04:54:40,343 root INFO copying Bio/Phylo/Applications/_Phyml.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/Applications
2025-05-04 04:54:40,346 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-05-04 04:54:40,347 root INFO copying Bio/Phylo/PAML/codeml.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-05-04 04:54:40,348 root INFO copying Bio/Phylo/PAML/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-05-04 04:54:40,350 root INFO copying Bio/Phylo/PAML/yn00.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-05-04 04:54:40,352 root INFO copying Bio/Phylo/PAML/_paml.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-05-04 04:54:40,354 root INFO copying Bio/Phylo/PAML/_parse_yn00.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-05-04 04:54:40,355 root INFO copying Bio/Phylo/PAML/chi2.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-05-04 04:54:40,357 root INFO copying Bio/Phylo/PAML/_parse_codeml.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-05-04 04:54:40,359 root INFO copying Bio/Phylo/PAML/baseml.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-05-04 04:54:40,361 root INFO copying Bio/Phylo/PAML/_parse_baseml.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-05-04 04:54:40,363 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/UniGene
2025-05-04 04:54:40,364 root INFO copying Bio/UniGene/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/UniGene
2025-05-04 04:54:40,366 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/UniProt
2025-05-04 04:54:40,367 root INFO copying Bio/UniProt/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/UniProt
2025-05-04 04:54:40,369 root INFO copying Bio/UniProt/GOA.py -> build/lib.linux-riscv64-cpython-312/Bio/UniProt
2025-05-04 04:54:40,371 root INFO creating build/lib.linux-riscv64-cpython-312/BioSQL
2025-05-04 04:54:40,372 root INFO copying BioSQL/__init__.py -> build/lib.linux-riscv64-cpython-312/BioSQL
2025-05-04 04:54:40,374 root INFO copying BioSQL/DBUtils.py -> build/lib.linux-riscv64-cpython-312/BioSQL
2025-05-04 04:54:40,376 root INFO copying BioSQL/BioSeq.py -> build/lib.linux-riscv64-cpython-312/BioSQL
2025-05-04 04:54:40,378 root INFO copying BioSQL/Loader.py -> build/lib.linux-riscv64-cpython-312/BioSQL
2025-05-04 04:54:40,380 root INFO copying BioSQL/BioSeqDatabase.py -> build/lib.linux-riscv64-cpython-312/BioSQL
2025-05-04 04:54:40,382 root INFO running egg_info
2025-05-04 04:54:40,398 root INFO writing biopython.egg-info/PKG-INFO
2025-05-04 04:54:40,401 root INFO writing dependency_links to biopython.egg-info/dependency_links.txt
2025-05-04 04:54:40,402 root INFO writing requirements to biopython.egg-info/requires.txt
2025-05-04 04:54:40,404 root INFO writing top-level names to biopython.egg-info/top_level.txt
2025-05-04 04:54:40,494 root INFO reading manifest file 'biopython.egg-info/SOURCES.txt'
2025-05-04 04:54:40,763 root INFO reading manifest template 'MANIFEST.in'
2025-05-04 04:54:41,229 root WARNING warning: no previously-included files found matching 'Doc/_build'
2025-05-04 04:54:41,254 root WARNING warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip'
2025-05-04 04:54:41,266 root WARNING warning: no previously-included files matching '*.pyc' found anywhere in distribution
2025-05-04 04:54:41,278 root WARNING warning: no previously-included files matching '*.pyo' found anywhere in distribution
2025-05-04 04:54:41,290 root WARNING warning: no previously-included files matching '*.py{}' found anywhere in distribution
2025-05-04 04:54:41,302 root WARNING warning: no previously-included files matching '*.py-e' found anywhere in distribution
2025-05-04 04:54:41,335 root WARNING warning: no previously-included files found matching 'Bio/Align/substitution_matrices/data/README.txt'
2025-05-04 04:54:41,336 root INFO adding license file 'LICENSE'
2025-05-04 04:54:41,336 root INFO adding license file 'LICENSE.rst'
2025-05-04 04:54:41,526 root INFO writing manifest file 'biopython.egg-info/SOURCES.txt'
/usr/lib/python3.12/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Align.substitution_matrices.data' is absent from the `packages` configuration.
!!

        ********************************************************************************
        ############################
        # Package would be ignored #
        ############################
        Python recognizes 'Bio.Align.substitution_matrices.data' as an importable package[^1],
        but it is absent from setuptools' `packages` configuration.

        This leads to an ambiguous overall configuration. If you want to distribute this
        package, please make sure that 'Bio.Align.substitution_matrices.data' is explicitly added
        to the `packages` configuration field.

        Alternatively, you can also rely on setuptools' discovery methods
        (for example by using `find_namespace_packages(...)`/`find_namespace:`
        instead of `find_packages(...)`/`find:`).

        You can read more about "package discovery" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

        If you don't want 'Bio.Align.substitution_matrices.data' to be distributed and are
        already explicitly excluding 'Bio.Align.substitution_matrices.data' via
        `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
        you can try to use `exclude_package_data`, or `include-package-data=False` in
        combination with a more fine grained `package-data` configuration.

        You can read more about "package data files" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


        [^1]: For Python, any directory (with suitable naming) can be imported,
              even if it does not contain any `.py` files.
              On the other hand, currently there is no concept of package data
              directory, all directories are treated like packages.
        ********************************************************************************

!!
  check.warn(importable)
/usr/lib/python3.12/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.DTDs' is absent from the `packages` configuration.
!!

        ********************************************************************************
        ############################
        # Package would be ignored #
        ############################
        Python recognizes 'Bio.Entrez.DTDs' as an importable package[^1],
        but it is absent from setuptools' `packages` configuration.

        This leads to an ambiguous overall configuration. If you want to distribute this
        package, please make sure that 'Bio.Entrez.DTDs' is explicitly added
        to the `packages` configuration field.

        Alternatively, you can also rely on setuptools' discovery methods
        (for example by using `find_namespace_packages(...)`/`find_namespace:`
        instead of `find_packages(...)`/`find:`).

        You can read more about "package discovery" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

        If you don't want 'Bio.Entrez.DTDs' to be distributed and are
        already explicitly excluding 'Bio.Entrez.DTDs' via
        `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
        you can try to use `exclude_package_data`, or `include-package-data=False` in
        combination with a more fine grained `package-data` configuration.

        You can read more about "package data files" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


        [^1]: For Python, any directory (with suitable naming) can be imported,
              even if it does not contain any `.py` files.
              On the other hand, currently there is no concept of package data
              directory, all directories are treated like packages.
        ********************************************************************************

!!
  check.warn(importable)
/usr/lib/python3.12/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.XSDs' is absent from the `packages` configuration.
!!

        ********************************************************************************
        ############################
        # Package would be ignored #
        ############################
        Python recognizes 'Bio.Entrez.XSDs' as an importable package[^1],
        but it is absent from setuptools' `packages` configuration.

        This leads to an ambiguous overall configuration. If you want to distribute this
        package, please make sure that 'Bio.Entrez.XSDs' is explicitly added
        to the `packages` configuration field.

        Alternatively, you can also rely on setuptools' discovery methods
        (for example by using `find_namespace_packages(...)`/`find_namespace:`
        instead of `find_packages(...)`/`find:`).

        You can read more about "package discovery" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

        If you don't want 'Bio.Entrez.XSDs' to be distributed and are
        already explicitly excluding 'Bio.Entrez.XSDs' via
        `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
        you can try to use `exclude_package_data`, or `include-package-data=False` in
        combination with a more fine grained `package-data` configuration.

        You can read more about "package data files" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


        [^1]: For Python, any directory (with suitable naming) can be imported,
              even if it does not contain any `.py` files.
              On the other hand, currently there is no concept of package data
              directory, all directories are treated like packages.
        ********************************************************************************

!!
  check.warn(importable)
2025-05-04 04:54:41,700 root INFO copying Bio/cpairwise2module.c -> build/lib.linux-riscv64-cpython-312/Bio
2025-05-04 04:54:41,702 root INFO copying Bio/py.typed -> build/lib.linux-riscv64-cpython-312/Bio
2025-05-04 04:54:41,704 root INFO copying Bio/Align/_aligncore.c -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:41,705 root INFO copying Bio/Align/_codonaligner.c -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:41,707 root INFO copying Bio/Align/_pairwisealigner.c -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:41,711 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,712 root INFO copying Bio/Align/substitution_matrices/data/BENNER22 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,714 root INFO copying Bio/Align/substitution_matrices/data/BENNER6 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,715 root INFO copying Bio/Align/substitution_matrices/data/BENNER74 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,717 root INFO copying Bio/Align/substitution_matrices/data/BLASTN -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,719 root INFO copying Bio/Align/substitution_matrices/data/BLASTP -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,721 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM45 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,723 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM50 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,724 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM62 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,726 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM80 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,728 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM90 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,730 root INFO copying Bio/Align/substitution_matrices/data/DAYHOFF -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,732 root INFO copying Bio/Align/substitution_matrices/data/FENG -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,733 root INFO copying Bio/Align/substitution_matrices/data/GENETIC -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,735 root INFO copying Bio/Align/substitution_matrices/data/GONNET1992 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,737 root INFO copying Bio/Align/substitution_matrices/data/HOXD70 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,739 root INFO copying Bio/Align/substitution_matrices/data/JOHNSON -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,741 root INFO copying Bio/Align/substitution_matrices/data/JONES -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,742 root INFO copying Bio/Align/substitution_matrices/data/LEVIN -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,744 root INFO copying Bio/Align/substitution_matrices/data/MCLACHLAN -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,746 root INFO copying Bio/Align/substitution_matrices/data/MDM78 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,748 root INFO copying Bio/Align/substitution_matrices/data/MEGABLAST -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,750 root INFO copying Bio/Align/substitution_matrices/data/NUC.4.4 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,751 root INFO copying Bio/Align/substitution_matrices/data/PAM250 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,753 root INFO copying Bio/Align/substitution_matrices/data/PAM30 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-05-04 04:54:41,755 root INFO copying Bio/Align/substitution_matrices/data/PAM70 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
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2025-05-04 04:54:42,285 root INFO copying Bio/Entrez/DTDs/pubmed_020114.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,286 root INFO copying Bio/Entrez/DTDs/pubmed_080101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,288 root INFO copying Bio/Entrez/DTDs/pubmed_090101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,290 root INFO copying Bio/Entrez/DTDs/pubmed_100101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,292 root INFO copying Bio/Entrez/DTDs/pubmed_100301.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,294 root INFO copying Bio/Entrez/DTDs/pubmed_110101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,295 root INFO copying Bio/Entrez/DTDs/pubmed_120101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,297 root INFO copying Bio/Entrez/DTDs/pubmed_130101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,299 root INFO copying Bio/Entrez/DTDs/pubmed_130501.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,301 root INFO copying Bio/Entrez/DTDs/pubmed_140101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,303 root INFO copying Bio/Entrez/DTDs/pubmed_150101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,304 root INFO copying Bio/Entrez/DTDs/pubmed_180101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,306 root INFO copying Bio/Entrez/DTDs/pubmed_180601.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,308 root INFO copying Bio/Entrez/DTDs/pubmed_190101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,310 root INFO copying Bio/Entrez/DTDs/references.ent -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,314 root INFO copying Bio/Entrez/DTDs/section.ent -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,316 root INFO copying Bio/Entrez/DTDs/taxon.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,317 root INFO copying Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,319 root INFO copying Bio/Entrez/DTDs/xhtml-table-1.mod -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,321 root INFO copying Bio/Entrez/DTDs/xmlspecchars.ent -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-05-04 04:54:42,323 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Entrez/XSDs
2025-05-04 04:54:42,324 root INFO copying Bio/Entrez/XSDs/IPGReportSet.xsd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/XSDs
2025-05-04 04:54:42,325 root INFO copying Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/XSDs
2025-05-04 04:54:42,327 root INFO copying Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/XSDs
2025-05-04 04:54:42,329 root INFO copying Bio/motifs/_pwm.c -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-05-04 04:54:42,331 root INFO copying Bio/Nexus/cnexus.c -> build/lib.linux-riscv64-cpython-312/Bio/Nexus
2025-05-04 04:54:42,333 root INFO copying Bio/PDB/bcifhelpermodule.c -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:42,335 root INFO copying Bio/PDB/ccealignmodule.c -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:42,337 root INFO copying Bio/PDB/kdtrees.c -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:54:42,339 root INFO copying Bio/SeqIO/_twoBitIO.c -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:54:42,341 root INFO copying BioSQL/py.typed -> build/lib.linux-riscv64-cpython-312/BioSQL
2025-05-04 04:54:42,379 root INFO running build_ext
2025-05-04 04:54:42,389 root INFO building 'Bio.Align._codonaligner' extension
2025-05-04 04:54:42,391 root INFO creating build/temp.linux-riscv64-cpython-312/Bio/Align
2025-05-04 04:54:42,392 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Align/_codonaligner.c -o build/temp.linux-riscv64-cpython-312/Bio/Align/_codonaligner.o
2025-05-04 04:54:45,019 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/Align/_codonaligner.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/Align/_codonaligner.cpython-312-riscv64-linux-musl.so
2025-05-04 04:54:45,061 root INFO building 'Bio.Align._pairwisealigner' extension
2025-05-04 04:54:45,063 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Align/_pairwisealigner.c -o build/temp.linux-riscv64-cpython-312/Bio/Align/_pairwisealigner.o
2025-05-04 04:55:19,732 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/Align/_pairwisealigner.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/Align/_pairwisealigner.cpython-312-riscv64-linux-musl.so
2025-05-04 04:55:19,829 root INFO building 'Bio.Align._aligncore' extension
2025-05-04 04:55:19,831 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Align/_aligncore.c -o build/temp.linux-riscv64-cpython-312/Bio/Align/_aligncore.o
2025-05-04 04:55:21,097 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/Align/_aligncore.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/Align/_aligncore.cpython-312-riscv64-linux-musl.so
2025-05-04 04:55:21,137 root INFO building 'Bio.cpairwise2' extension
2025-05-04 04:55:21,138 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/cpairwise2module.c -o build/temp.linux-riscv64-cpython-312/Bio/cpairwise2module.o
2025-05-04 04:55:22,735 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/cpairwise2module.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/cpairwise2.cpython-312-riscv64-linux-musl.so
2025-05-04 04:55:22,776 root INFO building 'Bio.Nexus.cnexus' extension
2025-05-04 04:55:22,777 root INFO creating build/temp.linux-riscv64-cpython-312/Bio/Nexus
2025-05-04 04:55:22,778 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Nexus/cnexus.c -o build/temp.linux-riscv64-cpython-312/Bio/Nexus/cnexus.o
2025-05-04 04:55:23,506 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/Nexus/cnexus.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/Nexus/cnexus.cpython-312-riscv64-linux-musl.so
2025-05-04 04:55:23,544 root INFO building 'Bio.motifs._pwm' extension
2025-05-04 04:55:23,545 root INFO creating build/temp.linux-riscv64-cpython-312/Bio/motifs
2025-05-04 04:55:23,546 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/motifs/_pwm.c -o build/temp.linux-riscv64-cpython-312/Bio/motifs/_pwm.o
2025-05-04 04:55:24,361 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/motifs/_pwm.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/motifs/_pwm.cpython-312-riscv64-linux-musl.so
2025-05-04 04:55:24,399 root INFO building 'Bio.Cluster._cluster' extension
2025-05-04 04:55:24,401 root INFO creating build/temp.linux-riscv64-cpython-312/Bio/Cluster
2025-05-04 04:55:24,403 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Cluster/cluster.c -o build/temp.linux-riscv64-cpython-312/Bio/Cluster/cluster.o -DCLUSTER_USE_PYTHON_MEMORY
2025-05-04 04:55:35,248 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Cluster/clustermodule.c -o build/temp.linux-riscv64-cpython-312/Bio/Cluster/clustermodule.o -DCLUSTER_USE_PYTHON_MEMORY
2025-05-04 04:55:38,563 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/Cluster/cluster.o build/temp.linux-riscv64-cpython-312/Bio/Cluster/clustermodule.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/Cluster/_cluster.cpython-312-riscv64-linux-musl.so
2025-05-04 04:55:38,619 root INFO building 'Bio.PDB.ccealign' extension
2025-05-04 04:55:38,621 root INFO creating build/temp.linux-riscv64-cpython-312/Bio/PDB
2025-05-04 04:55:38,622 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/PDB/ccealignmodule.c -o build/temp.linux-riscv64-cpython-312/Bio/PDB/ccealignmodule.o
2025-05-04 04:55:40,269 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/PDB/ccealignmodule.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/PDB/ccealign.cpython-312-riscv64-linux-musl.so
2025-05-04 04:55:40,310 root INFO building 'Bio.PDB.kdtrees' extension
2025-05-04 04:55:40,312 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/PDB/kdtrees.c -o build/temp.linux-riscv64-cpython-312/Bio/PDB/kdtrees.o
2025-05-04 04:55:42,342 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/PDB/kdtrees.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/PDB/kdtrees.cpython-312-riscv64-linux-musl.so
2025-05-04 04:55:42,383 root INFO building 'Bio.PDB._bcif_helper' extension
2025-05-04 04:55:42,385 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/PDB/bcifhelpermodule.c -o build/temp.linux-riscv64-cpython-312/Bio/PDB/bcifhelpermodule.o
2025-05-04 04:55:43,231 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/PDB/bcifhelpermodule.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/PDB/_bcif_helper.cpython-312-riscv64-linux-musl.so
2025-05-04 04:55:43,269 root INFO building 'Bio.SeqIO._twoBitIO' extension
2025-05-04 04:55:43,271 root INFO creating build/temp.linux-riscv64-cpython-312/Bio/SeqIO
2025-05-04 04:55:43,272 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/SeqIO/_twoBitIO.c -o build/temp.linux-riscv64-cpython-312/Bio/SeqIO/_twoBitIO.o
2025-05-04 04:55:44,262 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/SeqIO/_twoBitIO.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/SeqIO/_twoBitIO.cpython-312-riscv64-linux-musl.so
2025-05-04 04:55:44,332 root INFO installing to build/bdist.linux-riscv64/wheel
2025-05-04 04:55:44,333 root INFO running install
2025-05-04 04:55:44,401 root INFO running install_lib
2025-05-04 04:55:44,418 root INFO creating build/bdist.linux-riscv64/wheel
2025-05-04 04:55:44,420 root INFO creating build/bdist.linux-riscv64/wheel/BioSQL
2025-05-04 04:55:44,421 root INFO copying build/lib.linux-riscv64-cpython-312/BioSQL/__init__.py -> build/bdist.linux-riscv64/wheel/./BioSQL
2025-05-04 04:55:44,422 root INFO copying build/lib.linux-riscv64-cpython-312/BioSQL/DBUtils.py -> build/bdist.linux-riscv64/wheel/./BioSQL
2025-05-04 04:55:44,423 root INFO copying build/lib.linux-riscv64-cpython-312/BioSQL/BioSeq.py -> build/bdist.linux-riscv64/wheel/./BioSQL
2025-05-04 04:55:44,425 root INFO copying build/lib.linux-riscv64-cpython-312/BioSQL/py.typed -> build/bdist.linux-riscv64/wheel/./BioSQL
2025-05-04 04:55:44,426 root INFO copying build/lib.linux-riscv64-cpython-312/BioSQL/Loader.py -> build/bdist.linux-riscv64/wheel/./BioSQL
2025-05-04 04:55:44,428 root INFO copying build/lib.linux-riscv64-cpython-312/BioSQL/BioSeqDatabase.py -> build/bdist.linux-riscv64/wheel/./BioSQL
2025-05-04 04:55:44,430 root INFO creating build/bdist.linux-riscv64/wheel/Bio
2025-05-04 04:55:44,431 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/kNN.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-05-04 04:55:44,433 root INFO creating build/bdist.linux-riscv64/wheel/Bio/CAPS
2025-05-04 04:55:44,434 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/CAPS/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/CAPS
2025-05-04 04:55:44,435 root INFO creating build/bdist.linux-riscv64/wheel/Bio/GenBank
2025-05-04 04:55:44,436 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/GenBank/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/GenBank
2025-05-04 04:55:44,438 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/GenBank/Scanner.py -> build/bdist.linux-riscv64/wheel/./Bio/GenBank
2025-05-04 04:55:44,440 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/GenBank/utils.py -> build/bdist.linux-riscv64/wheel/./Bio/GenBank
2025-05-04 04:55:44,441 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/GenBank/Record.py -> build/bdist.linux-riscv64/wheel/./Bio/GenBank
2025-05-04 04:55:44,443 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Nexus
2025-05-04 04:55:44,444 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Nexus/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2025-05-04 04:55:44,445 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Nexus/Nodes.py -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2025-05-04 04:55:44,447 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Nexus/cnexus.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2025-05-04 04:55:44,448 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Nexus/Nexus.py -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2025-05-04 04:55:44,450 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Nexus/Trees.py -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2025-05-04 04:55:44,452 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Nexus/cnexus.c -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2025-05-04 04:55:44,453 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Nexus/StandardData.py -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2025-05-04 04:55:44,454 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-05-04 04:55:44,455 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Alphabet
2025-05-04 04:55:44,456 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Alphabet/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Alphabet
2025-05-04 04:55:44,458 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/MarkovModel.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-05-04 04:55:44,460 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Data
2025-05-04 04:55:44,461 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Data/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Data
2025-05-04 04:55:44,462 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Data/PDBData.py -> build/bdist.linux-riscv64/wheel/./Bio/Data
2025-05-04 04:55:44,463 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Data/IUPACData.py -> build/bdist.linux-riscv64/wheel/./Bio/Data
2025-05-04 04:55:44,465 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Data/CodonTable.py -> build/bdist.linux-riscv64/wheel/./Bio/Data
2025-05-04 04:55:44,467 root INFO creating build/bdist.linux-riscv64/wheel/Bio/UniGene
2025-05-04 04:55:44,468 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/UniGene/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/UniGene
2025-05-04 04:55:44,469 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqRecord.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-05-04 04:55:44,470 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/pairwise2.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-05-04 04:55:44,473 root INFO creating build/bdist.linux-riscv64/wheel/Bio/ExPASy
2025-05-04 04:55:44,474 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/ExPASy/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/ExPASy
2025-05-04 04:55:44,475 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/ExPASy/Prodoc.py -> build/bdist.linux-riscv64/wheel/./Bio/ExPASy
2025-05-04 04:55:44,477 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/ExPASy/Prosite.py -> build/bdist.linux-riscv64/wheel/./Bio/ExPASy
2025-05-04 04:55:44,478 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/ExPASy/cellosaurus.py -> build/bdist.linux-riscv64/wheel/./Bio/ExPASy
2025-05-04 04:55:44,479 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/ExPASy/ScanProsite.py -> build/bdist.linux-riscv64/wheel/./Bio/ExPASy
2025-05-04 04:55:44,480 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/ExPASy/Enzyme.py -> build/bdist.linux-riscv64/wheel/./Bio/ExPASy
2025-05-04 04:55:44,482 root INFO creating build/bdist.linux-riscv64/wheel/Bio/phenotype
2025-05-04 04:55:44,483 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/phenotype/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/phenotype
2025-05-04 04:55:44,485 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/phenotype/pm_fitting.py -> build/bdist.linux-riscv64/wheel/./Bio/phenotype
2025-05-04 04:55:44,486 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/phenotype/phen_micro.py -> build/bdist.linux-riscv64/wheel/./Bio/phenotype
2025-05-04 04:55:44,488 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Phylo
2025-05-04 04:55:44,489 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-05-04 04:55:44,490 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/BaseTree.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-05-04 04:55:44,492 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/CDAOIO.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-05-04 04:55:44,493 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PhyloXMLIO.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-05-04 04:55:44,494 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/_cdao_owl.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-05-04 04:55:44,496 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Phylo/Applications
2025-05-04 04:55:44,497 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/Applications/_Raxml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/Applications
2025-05-04 04:55:44,499 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/Applications/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/Applications
2025-05-04 04:55:44,500 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/Applications/_Fasttree.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/Applications
2025-05-04 04:55:44,501 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/Applications/_Phyml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/Applications
2025-05-04 04:55:44,502 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/Consensus.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-05-04 04:55:44,504 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/Newick.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-05-04 04:55:44,505 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/_utils.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-05-04 04:55:44,507 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/TreeConstruction.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-05-04 04:55:44,508 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/_io.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-05-04 04:55:44,509 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PhyloXML.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-05-04 04:55:44,511 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/NeXMLIO.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-05-04 04:55:44,512 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/CDAO.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-05-04 04:55:44,513 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/NeXML.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-05-04 04:55:44,514 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/NexusIO.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-05-04 04:55:44,515 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/NewickIO.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-05-04 04:55:44,517 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Phylo/PAML
2025-05-04 04:55:44,518 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML/codeml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2025-05-04 04:55:44,519 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2025-05-04 04:55:44,521 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML/yn00.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2025-05-04 04:55:44,522 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML/_paml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2025-05-04 04:55:44,523 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML/_parse_yn00.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2025-05-04 04:55:44,525 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML/chi2.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2025-05-04 04:55:44,526 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML/_parse_codeml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2025-05-04 04:55:44,527 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML/baseml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2025-05-04 04:55:44,528 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML/_parse_baseml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2025-05-04 04:55:44,530 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/File.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-05-04 04:55:44,531 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/NaiveBayes.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-05-04 04:55:44,533 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Graphics
2025-05-04 04:55:44,534 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/KGML_vis.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2025-05-04 04:55:44,536 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Graphics/GenomeDiagram
2025-05-04 04:55:44,537 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_Track.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-05-04 04:55:44,539 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_Diagram.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-05-04 04:55:44,540 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_Graph.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-05-04 04:55:44,541 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-05-04 04:55:44,542 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-05-04 04:55:44,544 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_Feature.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-05-04 04:55:44,545 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-05-04 04:55:44,547 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-05-04 04:55:44,548 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-05-04 04:55:44,549 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_Colors.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-05-04 04:55:44,551 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-05-04 04:55:44,552 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-05-04 04:55:44,554 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2025-05-04 04:55:44,555 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/BasicChromosome.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2025-05-04 04:55:44,556 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/Comparative.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2025-05-04 04:55:44,557 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/DisplayRepresentation.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2025-05-04 04:55:44,559 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/Distribution.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2025-05-04 04:55:44,560 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/ColorSpiral.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2025-05-04 04:55:44,562 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/cpairwise2module.c -> build/bdist.linux-riscv64/wheel/./Bio
2025-05-04 04:55:44,564 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SCOP
2025-05-04 04:55:44,565 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SCOP/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2025-05-04 04:55:44,566 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SCOP/Des.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2025-05-04 04:55:44,567 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SCOP/Hie.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2025-05-04 04:55:44,568 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SCOP/Cla.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2025-05-04 04:55:44,569 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SCOP/Dom.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2025-05-04 04:55:44,570 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SCOP/Residues.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2025-05-04 04:55:44,571 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SCOP/Raf.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2025-05-04 04:55:44,573 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Application
2025-05-04 04:55:44,574 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Application/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Application
2025-05-04 04:55:44,576 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO
2025-05-04 04:55:44,577 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO
2025-05-04 04:55:44,578 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_index.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO
2025-05-04 04:55:44,580 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/InterproscanIO
2025-05-04 04:55:44,581 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/InterproscanIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/InterproscanIO
2025-05-04 04:55:44,582 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/InterproscanIO
2025-05-04 04:55:44,584 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/HmmerIO
2025-05-04 04:55:44,585 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HmmerIO
2025-05-04 04:55:44,586 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HmmerIO
2025-05-04 04:55:44,588 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HmmerIO
2025-05-04 04:55:44,589 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HmmerIO
2025-05-04 04:55:44,590 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO/_base.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HmmerIO
2025-05-04 04:55:44,591 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HmmerIO
2025-05-04 04:55:44,593 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/BlastIO
2025-05-04 04:55:44,595 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/BlastIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/BlastIO
2025-05-04 04:55:44,596 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/BlastIO/blast_tab.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/BlastIO
2025-05-04 04:55:44,597 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/BlastIO/blast_xml.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/BlastIO
2025-05-04 04:55:44,599 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/ExonerateIO
2025-05-04 04:55:44,600 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/ExonerateIO
2025-05-04 04:55:44,602 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/ExonerateIO
2025-05-04 04:55:44,603 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/ExonerateIO
2025-05-04 04:55:44,604 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/ExonerateIO
2025-05-04 04:55:44,606 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO/_base.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/ExonerateIO
2025-05-04 04:55:44,607 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_utils.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO
2025-05-04 04:55:44,608 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/FastaIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO
2025-05-04 04:55:44,610 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/BlatIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO
2025-05-04 04:55:44,611 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/HHsuiteIO
2025-05-04 04:55:44,612 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HHsuiteIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HHsuiteIO
2025-05-04 04:55:44,614 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HHsuiteIO
2025-05-04 04:55:44,615 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/_model
2025-05-04 04:55:44,616 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/_model
2025-05-04 04:55:44,617 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model/hit.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/_model
2025-05-04 04:55:44,619 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model/_base.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/_model
2025-05-04 04:55:44,620 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model/query.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/_model
2025-05-04 04:55:44,621 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model/hsp.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/_model
2025-05-04 04:55:44,623 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Blast
2025-05-04 04:55:44,624 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Blast/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Blast
2025-05-04 04:55:44,626 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Blast/NCBIXML.py -> build/bdist.linux-riscv64/wheel/./Bio/Blast
2025-05-04 04:55:44,627 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Blast/Applications.py -> build/bdist.linux-riscv64/wheel/./Bio/Blast
2025-05-04 04:55:44,629 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Blast/_writers.py -> build/bdist.linux-riscv64/wheel/./Bio/Blast
2025-05-04 04:55:44,630 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Blast/_parser.py -> build/bdist.linux-riscv64/wheel/./Bio/Blast
2025-05-04 04:55:44,632 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Blast/NCBIWWW.py -> build/bdist.linux-riscv64/wheel/./Bio/Blast
2025-05-04 04:55:44,634 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/_utils.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-05-04 04:55:44,636 root INFO creating build/bdist.linux-riscv64/wheel/Bio/UniProt
2025-05-04 04:55:44,637 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/UniProt/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/UniProt
2025-05-04 04:55:44,638 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/UniProt/GOA.py -> build/bdist.linux-riscv64/wheel/./Bio/UniProt
2025-05-04 04:55:44,639 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SwissProt
2025-05-04 04:55:44,641 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SwissProt/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SwissProt
2025-05-04 04:55:44,642 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SwissProt/KeyWList.py -> build/bdist.linux-riscv64/wheel/./Bio/SwissProt
2025-05-04 04:55:44,644 root INFO creating build/bdist.linux-riscv64/wheel/Bio/codonalign
2025-05-04 04:55:44,645 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/codonalign/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/codonalign
2025-05-04 04:55:44,646 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/codonalign/codonalignment.py -> build/bdist.linux-riscv64/wheel/./Bio/codonalign
2025-05-04 04:55:44,647 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/codonalign/codonseq.py -> build/bdist.linux-riscv64/wheel/./Bio/codonalign
2025-05-04 04:55:44,649 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/py.typed -> build/bdist.linux-riscv64/wheel/./Bio
2025-05-04 04:55:44,650 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Sequencing
2025-05-04 04:55:44,651 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Sequencing/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Sequencing
2025-05-04 04:55:44,652 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Phd.py -> build/bdist.linux-riscv64/wheel/./Bio/Sequencing
2025-05-04 04:55:44,654 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Sequencing/Applications
2025-05-04 04:55:44,655 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Applications/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Sequencing/Applications
2025-05-04 04:55:44,657 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Applications/_Novoalign.py -> build/bdist.linux-riscv64/wheel/./Bio/Sequencing/Applications
2025-05-04 04:55:44,658 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Applications/_samtools.py -> build/bdist.linux-riscv64/wheel/./Bio/Sequencing/Applications
2025-05-04 04:55:44,659 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Applications/_bwa.py -> build/bdist.linux-riscv64/wheel/./Bio/Sequencing/Applications
2025-05-04 04:55:44,661 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Ace.py -> build/bdist.linux-riscv64/wheel/./Bio/Sequencing
2025-05-04 04:55:44,663 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SeqIO
2025-05-04 04:55:44,664 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/UniprotIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,665 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,667 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/_index.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,668 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/XdnaIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,669 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/SnapGeneIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,670 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/PhdIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,672 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/TwoBitIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,673 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/IgIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,674 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/SeqXmlIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,675 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/Interfaces.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,677 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/TabIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,678 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/_twoBitIO.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,679 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/FastaIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,681 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/SwissIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,682 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/NibIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,683 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/SffIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,685 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/AbiIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,687 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/PdbIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,689 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/AceIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,690 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/QualityIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,692 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/GckIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,693 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/GfaIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,695 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/_twoBitIO.c -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,696 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/PirIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,697 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/InsdcIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-05-04 04:55:44,700 root INFO creating build/bdist.linux-riscv64/wheel/Bio/KEGG
2025-05-04 04:55:44,701 root INFO creating build/bdist.linux-riscv64/wheel/Bio/KEGG/Map
2025-05-04 04:55:44,702 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/KEGG/Map/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/Map
2025-05-04 04:55:44,703 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/KEGG/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG
2025-05-04 04:55:44,705 root INFO creating build/bdist.linux-riscv64/wheel/Bio/KEGG/Compound
2025-05-04 04:55:44,706 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/KEGG/Compound/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/Compound
2025-05-04 04:55:44,707 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/KEGG/REST.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG
2025-05-04 04:55:44,709 root INFO creating build/bdist.linux-riscv64/wheel/Bio/KEGG/Gene
2025-05-04 04:55:44,710 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/KEGG/Gene/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/Gene
2025-05-04 04:55:44,712 root INFO creating build/bdist.linux-riscv64/wheel/Bio/KEGG/KGML
2025-05-04 04:55:44,713 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/KEGG/KGML/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/KGML
2025-05-04 04:55:44,714 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/KEGG/KGML/KGML_pathway.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/KGML
2025-05-04 04:55:44,715 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/KEGG/KGML/KGML_parser.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/KGML
2025-05-04 04:55:44,717 root INFO creating build/bdist.linux-riscv64/wheel/Bio/KEGG/Enzyme
2025-05-04 04:55:44,718 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/KEGG/Enzyme/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/Enzyme
2025-05-04 04:55:44,720 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SeqUtils
2025-05-04 04:55:44,721 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqUtils/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2025-05-04 04:55:44,722 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqUtils/IsoelectricPoint.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2025-05-04 04:55:44,724 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqUtils/lcc.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2025-05-04 04:55:44,725 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqUtils/ProtParamData.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2025-05-04 04:55:44,727 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqUtils/CheckSum.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2025-05-04 04:55:44,728 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqUtils/MeltingTemp.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2025-05-04 04:55:44,729 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqUtils/ProtParam.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2025-05-04 04:55:44,731 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Geo
2025-05-04 04:55:44,732 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Geo/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Geo
2025-05-04 04:55:44,733 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Geo/Record.py -> build/bdist.linux-riscv64/wheel/./Bio/Geo
2025-05-04 04:55:44,734 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Entrez
2025-05-04 04:55:44,736 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Entrez
2025-05-04 04:55:44,738 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Entrez/DTDs
2025-05-04 04:55:44,739 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-notat1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,741 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,743 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,744 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,745 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,746 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/eLink_090910.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,747 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,749 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,751 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isodia.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,752 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/display.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,753 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NSE.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,755 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,756 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/phrase.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,757 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/epost.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,758 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,760 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,761 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/eSpell.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,762 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/para.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,763 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/modules.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,765 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,766 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,767 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/notat.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,769 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/GenBank_General.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,770 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,771 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isomscr.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,772 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/pubmed_090101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,773 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/pubmed_180101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,774 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/esummary_clinvar.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,776 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/pubmed_080101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,777 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_General.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,778 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,779 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/EMBL_General.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,780 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,781 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isocyr2.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,783 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,784 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,785 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/MMDB.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,787 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,788 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/format.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,789 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Pub.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,790 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,792 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,793 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isolat1.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,794 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,795 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/mmlalias.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,797 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/pubmed_110101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,798 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,799 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,801 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,802 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,803 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,805 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Medline.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,806 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/MMDB.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,807 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/xhtml-table-1.mod -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,808 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/eSummary_041029.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,809 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,810 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,812 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/pubmed_150101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,813 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_all.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,814 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Variation.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,815 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,816 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,818 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/MMDB_Features.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,819 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,820 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,822 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isonum.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,823 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,824 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NSE.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,825 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/references.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,827 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/archivecustom-models.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,829 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,830 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/BITS-question-answer2.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-05-04 04:55:44,833 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/mathml-in-pubmed.mod -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-05-04 04:55:44,837 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-05-04 04:55:44,844 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-05-04 04:55:44,871 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-05-04 04:55:44,892 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-05-04 04:55:44,900 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isogrk1.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-05-04 04:55:44,903 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-common1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-05-04 04:55:44,925 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-05-04 04:55:44,972 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Project.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,973 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-para1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,975 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,976 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/pubmed_100301.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,977 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-funding1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,979 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,980 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/chars.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,982 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/BITS-embedded-index2.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,983 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/SP_General.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,984 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,985 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isogrk2.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,987 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/common.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,989 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-format1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,990 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isolat2.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,992 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,993 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/backmatter.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,994 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isoamsc.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,996 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,997 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Protein.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:44,998 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,000 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-display1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,002 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/journalmeta.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,003 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,005 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-phrase1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,006 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/bookdoc_140101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,007 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,008 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,010 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,011 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,012 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/eSearch_020511.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,013 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Medlars.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,015 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,016 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,017 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,019 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,020 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,021 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/OMSSA.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,023 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,024 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/mathml3.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,025 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isogrk3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,027 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,028 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,029 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,030 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isoamsn.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,032 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,034 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,035 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,036 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/section.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,038 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,039 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/esummary_gene.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,041 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/pubmed_100101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,042 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,043 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,045 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isopub.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,046 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,048 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,049 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,051 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/htmltable.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,052 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,053 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,054 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,055 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,057 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-related-object1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,058 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isocyr1.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,059 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isomopf.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,061 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,062 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/esearch.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,063 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,065 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isobox.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,066 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/default-classes.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,067 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,069 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isoamsb.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,070 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,071 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Mime.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,072 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,074 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/articlemeta.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,076 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,077 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,078 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Systems.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,079 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/mathmlsetup.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,080 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Access.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,081 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,083 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,084 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,085 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/pubmed_140101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,086 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/list.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,088 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-list1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,089 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-05-04 04:55:45,092 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,094 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-05-04 04:55:45,098 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-math1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,099 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,100 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isoamsr.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-05-04 04:55:45,102 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/bookdoc_110101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,104 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,105 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isogrk4.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,106 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,107 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/esummary-v1.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,108 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/elink_020122.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,109 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/eInfo_020511.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,110 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Submit.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,111 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,113 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,114 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-05-04 04:55:45,116 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/Parser.py -> build/bdist.linux-riscv64/wheel/./Bio/Entrez
2025-05-04 04:55:45,118 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Entrez/XSDs
2025-05-04 04:55:45,119 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/XSDs
2025-05-04 04:55:45,120 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/XSDs
2025-05-04 04:55:45,121 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/XSDs/IPGReportSet.xsd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/XSDs
2025-05-04 04:55:45,123 root INFO creating build/bdist.linux-riscv64/wheel/Bio/TogoWS
2025-05-04 04:55:45,124 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/TogoWS/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/TogoWS
2025-05-04 04:55:45,126 root INFO creating build/bdist.linux-riscv64/wheel/Bio/PDB
2025-05-04 04:55:45,127 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Superimposer.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,128 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/binary_cif.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,129 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Selection.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,131 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,132 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/MMCIF2Dict.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,133 root INFO creating build/bdist.linux-riscv64/wheel/Bio/PDB/mmtf
2025-05-04 04:55:45,134 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/mmtf/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB/mmtf
2025-05-04 04:55:45,135 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/mmtf/mmtfio.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB/mmtf
2025-05-04 04:55:45,137 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/mmtf/DefaultParser.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB/mmtf
2025-05-04 04:55:45,138 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/ccealign.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,139 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/SCADIO.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,141 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/alphafold_db.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,142 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/PICIO.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,144 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/bcifhelpermodule.c -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,145 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/ccealignmodule.c -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,146 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/internal_coords.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,149 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/NACCESS.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,151 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Residue.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,152 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/vectors.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,153 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/kdtrees.c -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,155 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/parse_pdb_header.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,156 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/StructureAlignment.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,157 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/mmcifio.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,158 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Polypeptide.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,159 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/cealign.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,161 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/DSSP.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,162 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/PDBMLParser.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,164 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Chain.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,165 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/PSEA.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,166 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/qcprot.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,167 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/ic_data.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,169 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Dice.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,170 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/StructureBuilder.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,171 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/kdtrees.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,173 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/SASA.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,174 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/AbstractPropertyMap.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,176 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/FragmentMapper.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,177 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Model.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,178 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/ic_rebuild.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,179 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Entity.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,181 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/NeighborSearch.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,182 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/MMCIFParser.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,183 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/HSExposure.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,185 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Atom.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,186 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/PDBExceptions.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,188 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/PDBIO.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,189 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/PDBParser.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,190 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/PDBList.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,192 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Structure.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,193 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/_bcif_helper.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,194 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/ResidueDepth.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-05-04 04:55:45,196 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Seq.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-05-04 04:55:45,198 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Cluster
2025-05-04 04:55:45,199 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Cluster/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Cluster
2025-05-04 04:55:45,201 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Cluster/clustermodule.c -> build/bdist.linux-riscv64/wheel/./Bio/Cluster
2025-05-04 04:55:45,202 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Cluster/cluster.c -> build/bdist.linux-riscv64/wheel/./Bio/Cluster
2025-05-04 04:55:45,205 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Cluster/_cluster.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/Cluster
2025-05-04 04:55:45,207 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Cluster/cluster.h -> build/bdist.linux-riscv64/wheel/./Bio/Cluster
2025-05-04 04:55:45,208 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SVDSuperimposer
2025-05-04 04:55:45,209 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SVDSuperimposer/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SVDSuperimposer
2025-05-04 04:55:45,211 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Affy
2025-05-04 04:55:45,212 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Affy/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Affy
2025-05-04 04:55:45,213 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Affy/CelFile.py -> build/bdist.linux-riscv64/wheel/./Bio/Affy
2025-05-04 04:55:45,215 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Pathway
2025-05-04 04:55:45,217 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Pathway/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Pathway
2025-05-04 04:55:45,218 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Pathway/Rep
2025-05-04 04:55:45,219 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Pathway/Rep/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Pathway/Rep
2025-05-04 04:55:45,220 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Pathway/Rep/Graph.py -> build/bdist.linux-riscv64/wheel/./Bio/Pathway/Rep
2025-05-04 04:55:45,222 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Pathway/Rep/MultiGraph.py -> build/bdist.linux-riscv64/wheel/./Bio/Pathway/Rep
2025-05-04 04:55:45,223 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqFeature.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-05-04 04:55:45,226 root INFO creating build/bdist.linux-riscv64/wheel/Bio/AlignIO
2025-05-04 04:55:45,227 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-05-04 04:55:45,228 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/MauveIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-05-04 04:55:45,229 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/ClustalIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-05-04 04:55:45,231 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/StockholmIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-05-04 04:55:45,232 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/Interfaces.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-05-04 04:55:45,233 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/EmbossIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-05-04 04:55:45,235 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/FastaIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-05-04 04:55:45,236 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/NexusIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-05-04 04:55:45,237 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/MafIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-05-04 04:55:45,239 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/MsfIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-05-04 04:55:45,240 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/PhylipIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-05-04 04:55:45,242 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Medline
2025-05-04 04:55:45,243 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Medline/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Medline
2025-05-04 04:55:45,244 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/bgzf.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-05-04 04:55:45,246 root INFO creating build/bdist.linux-riscv64/wheel/Bio/PopGen
2025-05-04 04:55:45,248 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PopGen/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/PopGen
2025-05-04 04:55:45,249 root INFO creating build/bdist.linux-riscv64/wheel/Bio/PopGen/GenePop
2025-05-04 04:55:45,250 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop/LargeFileParser.py -> build/bdist.linux-riscv64/wheel/./Bio/PopGen/GenePop
2025-05-04 04:55:45,251 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/PopGen/GenePop
2025-05-04 04:55:45,253 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop/EasyController.py -> build/bdist.linux-riscv64/wheel/./Bio/PopGen/GenePop
2025-05-04 04:55:45,254 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop/Controller.py -> build/bdist.linux-riscv64/wheel/./Bio/PopGen/GenePop
2025-05-04 04:55:45,256 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop/FileParser.py -> build/bdist.linux-riscv64/wheel/./Bio/PopGen/GenePop
2025-05-04 04:55:45,257 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Emboss
2025-05-04 04:55:45,258 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Emboss/PrimerSearch.py -> build/bdist.linux-riscv64/wheel/./Bio/Emboss
2025-05-04 04:55:45,260 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Emboss/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Emboss
2025-05-04 04:55:45,261 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Emboss/Applications.py -> build/bdist.linux-riscv64/wheel/./Bio/Emboss
2025-05-04 04:55:45,262 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Emboss/Primer3.py -> build/bdist.linux-riscv64/wheel/./Bio/Emboss
2025-05-04 04:55:45,264 root INFO creating build/bdist.linux-riscv64/wheel/Bio/motifs
2025-05-04 04:55:45,267 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/meme.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-05-04 04:55:45,268 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-05-04 04:55:45,270 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/pfm.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-05-04 04:55:45,272 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/matrix.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-05-04 04:55:45,273 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/transfac.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-05-04 04:55:45,274 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/alignace.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-05-04 04:55:45,275 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/_pwm.c -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-05-04 04:55:45,277 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/minimal.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-05-04 04:55:45,278 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/clusterbuster.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-05-04 04:55:45,280 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/mast.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-05-04 04:55:45,281 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/thresholds.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-05-04 04:55:45,282 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/xms.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-05-04 04:55:45,283 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/_pwm.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-05-04 04:55:45,285 root INFO creating build/bdist.linux-riscv64/wheel/Bio/motifs/applications
2025-05-04 04:55:45,286 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/applications/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs/applications
2025-05-04 04:55:45,287 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/applications/_xxmotif.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs/applications
2025-05-04 04:55:45,289 root INFO creating build/bdist.linux-riscv64/wheel/Bio/motifs/jaspar
2025-05-04 04:55:45,290 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/jaspar/db.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs/jaspar
2025-05-04 04:55:45,292 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/jaspar/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs/jaspar
2025-05-04 04:55:45,294 root INFO creating build/bdist.linux-riscv64/wheel/Bio/NMR
2025-05-04 04:55:45,295 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/NMR/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/NMR
2025-05-04 04:55:45,296 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/NMR/xpktools.py -> build/bdist.linux-riscv64/wheel/./Bio/NMR
2025-05-04 04:55:45,297 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/NMR/NOEtools.py -> build/bdist.linux-riscv64/wheel/./Bio/NMR
2025-05-04 04:55:45,298 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/MaxEntropy.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-05-04 04:55:45,300 root INFO creating build/bdist.linux-riscv64/wheel/Bio/HMM
2025-05-04 04:55:45,301 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/HMM/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/HMM
2025-05-04 04:55:45,302 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/HMM/MarkovModel.py -> build/bdist.linux-riscv64/wheel/./Bio/HMM
2025-05-04 04:55:45,304 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/HMM/DynamicProgramming.py -> build/bdist.linux-riscv64/wheel/./Bio/HMM
2025-05-04 04:55:45,305 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/HMM/Utilities.py -> build/bdist.linux-riscv64/wheel/./Bio/HMM
2025-05-04 04:55:45,306 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/HMM/Trainer.py -> build/bdist.linux-riscv64/wheel/./Bio/HMM
2025-05-04 04:55:45,308 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Compass
2025-05-04 04:55:45,309 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Compass/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Compass
2025-05-04 04:55:45,311 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Align
2025-05-04 04:55:45,312 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/_pairwisealigner.c -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,315 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,317 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/clustal.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,318 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/hhr.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,320 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/bigmaf.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,321 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/exonerate.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,323 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Align/substitution_matrices
2025-05-04 04:55:45,324 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices
2025-05-04 04:55:45,326 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,327 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/PAM70 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,328 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/FENG -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,329 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BENNER22 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,330 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM80 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,331 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM90 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,332 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/MCLACHLAN -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,334 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/LEVIN -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,335 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/TRANS -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,336 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/DAYHOFF -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,337 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BENNER6 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,338 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/MEGABLAST -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,339 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/JOHNSON -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,340 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/RISLER -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,341 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM50 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,342 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/JONES -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,343 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/MDM78 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,345 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/NUC.4.4 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,346 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM45 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,347 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/GONNET1992 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,348 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM62 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,349 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BLASTN -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,350 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BENNER74 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,351 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/PAM250 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,352 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/PAM30 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,353 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/RAO -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,354 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BLASTP -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,355 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/STR -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,356 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/HOXD70 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,358 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/GENETIC -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,359 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/SCHNEIDER -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-05-04 04:55:45,360 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/AlignInfo.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,362 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/sam.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,363 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/_codonaligner.c -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,364 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/stockholm.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,366 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/_aligncore.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,367 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/_codonaligner.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,368 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/tabular.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,370 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Align/Applications
2025-05-04 04:55:45,371 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/_Dialign.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-05-04 04:55:45,373 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-05-04 04:55:45,374 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/_ClustalOmega.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-05-04 04:55:45,375 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/_TCoffee.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-05-04 04:55:45,376 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/_MSAProbs.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-05-04 04:55:45,378 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/_Prank.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-05-04 04:55:45,379 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/_Muscle.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-05-04 04:55:45,380 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/_Probcons.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-05-04 04:55:45,382 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/_Clustalw.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-05-04 04:55:45,383 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/_Mafft.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-05-04 04:55:45,385 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/a2m.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,386 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/bigbed.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,387 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/nexus.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,389 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/analysis.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,390 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/_aligncore.c -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,391 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/bigpsl.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,393 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/mauve.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,394 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/psl.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,396 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/maf.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,397 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/bed.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,398 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/phylip.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,400 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/msf.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,401 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/chain.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,402 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/emboss.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,404 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/fasta.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,405 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/_pairwisealigner.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,407 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/interfaces.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-05-04 04:55:45,409 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/cpairwise2.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio
2025-05-04 04:55:45,410 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/LogisticRegression.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-05-04 04:55:45,411 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Restriction
2025-05-04 04:55:45,413 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Restriction/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Restriction
2025-05-04 04:55:45,414 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Restriction/PrintFormat.py -> build/bdist.linux-riscv64/wheel/./Bio/Restriction
2025-05-04 04:55:45,415 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Restriction/Restriction.py -> build/bdist.linux-riscv64/wheel/./Bio/Restriction
2025-05-04 04:55:45,417 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Restriction/Restriction_Dictionary.py -> build/bdist.linux-riscv64/wheel/./Bio/Restriction
2025-05-04 04:55:45,422 root INFO running install_egg_info
2025-05-04 04:55:45,447 root INFO Copying biopython.egg-info to build/bdist.linux-riscv64/wheel/./biopython-1.85-py3.12.egg-info
2025-05-04 04:55:45,453 root INFO running install_scripts
2025-05-04 04:55:45,489 root INFO creating build/bdist.linux-riscv64/wheel/biopython-1.85.dist-info/WHEEL
2025-05-04 04:55:45,492 wheel INFO creating '/home/buildozer/aports/community/py3-biopython/src/biopython-1.85/.dist/.tmp-i29xe6f_/biopython-1.85-cp312-cp312-linux_riscv64.whl' and adding 'build/bdist.linux-riscv64/wheel' to it
2025-05-04 04:55:45,495 wheel INFO adding 'Bio/File.py'
2025-05-04 04:55:45,497 wheel INFO adding 'Bio/LogisticRegression.py'
2025-05-04 04:55:45,500 wheel INFO adding 'Bio/MarkovModel.py'
2025-05-04 04:55:45,502 wheel INFO adding 'Bio/MaxEntropy.py'
2025-05-04 04:55:45,504 wheel INFO adding 'Bio/NaiveBayes.py'
2025-05-04 04:55:45,506 wheel INFO adding 'Bio/Seq.py'
2025-05-04 04:55:45,511 wheel INFO adding 'Bio/SeqFeature.py'
2025-05-04 04:55:45,515 wheel INFO adding 'Bio/SeqRecord.py'
2025-05-04 04:55:45,517 wheel INFO adding 'Bio/__init__.py'
2025-05-04 04:55:45,519 wheel INFO adding 'Bio/_utils.py'
2025-05-04 04:55:45,521 wheel INFO adding 'Bio/bgzf.py'
2025-05-04 04:55:45,524 wheel INFO adding 'Bio/cpairwise2.cpython-312-riscv64-linux-musl.so'
2025-05-04 04:55:45,526 wheel INFO adding 'Bio/cpairwise2module.c'
2025-05-04 04:55:45,528 wheel INFO adding 'Bio/kNN.py'
2025-05-04 04:55:45,530 wheel INFO adding 'Bio/pairwise2.py'
2025-05-04 04:55:45,532 wheel INFO adding 'Bio/py.typed'
2025-05-04 04:55:45,536 wheel INFO adding 'Bio/Affy/CelFile.py'
2025-05-04 04:55:45,538 wheel INFO adding 'Bio/Affy/__init__.py'
2025-05-04 04:55:45,540 wheel INFO adding 'Bio/Align/AlignInfo.py'
2025-05-04 04:55:45,544 wheel INFO adding 'Bio/Align/__init__.py'
2025-05-04 04:55:45,549 wheel INFO adding 'Bio/Align/_aligncore.c'
2025-05-04 04:55:45,551 wheel INFO adding 'Bio/Align/_aligncore.cpython-312-riscv64-linux-musl.so'
2025-05-04 04:55:45,553 wheel INFO adding 'Bio/Align/_codonaligner.c'
2025-05-04 04:55:45,556 wheel INFO adding 'Bio/Align/_codonaligner.cpython-312-riscv64-linux-musl.so'
2025-05-04 04:55:45,560 wheel INFO adding 'Bio/Align/_pairwisealigner.c'
2025-05-04 04:55:45,567 wheel INFO adding 'Bio/Align/_pairwisealigner.cpython-312-riscv64-linux-musl.so'
2025-05-04 04:55:45,572 wheel INFO adding 'Bio/Align/a2m.py'
2025-05-04 04:55:45,574 wheel INFO adding 'Bio/Align/analysis.py'
2025-05-04 04:55:45,576 wheel INFO adding 'Bio/Align/bed.py'
2025-05-04 04:55:45,579 wheel INFO adding 'Bio/Align/bigbed.py'
2025-05-04 04:55:45,582 wheel INFO adding 'Bio/Align/bigmaf.py'
2025-05-04 04:55:45,584 wheel INFO adding 'Bio/Align/bigpsl.py'
2025-05-04 04:55:45,586 wheel INFO adding 'Bio/Align/chain.py'
2025-05-04 04:55:45,588 wheel INFO adding 'Bio/Align/clustal.py'
2025-05-04 04:55:45,590 wheel INFO adding 'Bio/Align/emboss.py'
2025-05-04 04:55:45,592 wheel INFO adding 'Bio/Align/exonerate.py'
2025-05-04 04:55:45,594 wheel INFO adding 'Bio/Align/fasta.py'
2025-05-04 04:55:45,596 wheel INFO adding 'Bio/Align/hhr.py'
2025-05-04 04:55:45,598 wheel INFO adding 'Bio/Align/interfaces.py'
2025-05-04 04:55:45,600 wheel INFO adding 'Bio/Align/maf.py'
2025-05-04 04:55:45,602 wheel INFO adding 'Bio/Align/mauve.py'
2025-05-04 04:55:45,604 wheel INFO adding 'Bio/Align/msf.py'
2025-05-04 04:55:45,605 wheel INFO adding 'Bio/Align/nexus.py'
2025-05-04 04:55:45,607 wheel INFO adding 'Bio/Align/phylip.py'
2025-05-04 04:55:45,608 wheel INFO adding 'Bio/Align/psl.py'
2025-05-04 04:55:45,611 wheel INFO adding 'Bio/Align/sam.py'
2025-05-04 04:55:45,613 wheel INFO adding 'Bio/Align/stockholm.py'
2025-05-04 04:55:45,615 wheel INFO adding 'Bio/Align/tabular.py'
2025-05-04 04:55:45,617 wheel INFO adding 'Bio/Align/Applications/_ClustalOmega.py'
2025-05-04 04:55:45,618 wheel INFO adding 'Bio/Align/Applications/_Clustalw.py'
2025-05-04 04:55:45,620 wheel INFO adding 'Bio/Align/Applications/_Dialign.py'
2025-05-04 04:55:45,622 wheel INFO adding 'Bio/Align/Applications/_MSAProbs.py'
2025-05-04 04:55:45,623 wheel INFO adding 'Bio/Align/Applications/_Mafft.py'
2025-05-04 04:55:45,626 wheel INFO adding 'Bio/Align/Applications/_Muscle.py'
2025-05-04 04:55:45,628 wheel INFO adding 'Bio/Align/Applications/_Prank.py'
2025-05-04 04:55:45,629 wheel INFO adding 'Bio/Align/Applications/_Probcons.py'
2025-05-04 04:55:45,630 wheel INFO adding 'Bio/Align/Applications/_TCoffee.py'
2025-05-04 04:55:45,632 wheel INFO adding 'Bio/Align/Applications/__init__.py'
2025-05-04 04:55:45,633 wheel INFO adding 'Bio/Align/substitution_matrices/__init__.py'
2025-05-04 04:55:45,635 wheel INFO adding 'Bio/Align/substitution_matrices/data/BENNER22'
2025-05-04 04:55:45,636 wheel INFO adding 'Bio/Align/substitution_matrices/data/BENNER6'
2025-05-04 04:55:45,638 wheel INFO adding 'Bio/Align/substitution_matrices/data/BENNER74'
2025-05-04 04:55:45,639 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLASTN'
2025-05-04 04:55:45,640 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLASTP'
2025-05-04 04:55:45,641 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM45'
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2025-05-04 04:55:46,479 wheel INFO adding 'Bio/Phylo/Applications/_Phyml.py'
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2025-05-04 04:55:46,482 wheel INFO adding 'Bio/Phylo/Applications/__init__.py'
2025-05-04 04:55:46,484 wheel INFO adding 'Bio/Phylo/PAML/__init__.py'
2025-05-04 04:55:46,485 wheel INFO adding 'Bio/Phylo/PAML/_paml.py'
2025-05-04 04:55:46,486 wheel INFO adding 'Bio/Phylo/PAML/_parse_baseml.py'
2025-05-04 04:55:46,488 wheel INFO adding 'Bio/Phylo/PAML/_parse_codeml.py'
2025-05-04 04:55:46,490 wheel INFO adding 'Bio/Phylo/PAML/_parse_yn00.py'
2025-05-04 04:55:46,492 wheel INFO adding 'Bio/Phylo/PAML/baseml.py'
2025-05-04 04:55:46,493 wheel INFO adding 'Bio/Phylo/PAML/chi2.py'
2025-05-04 04:55:46,495 wheel INFO adding 'Bio/Phylo/PAML/codeml.py'
2025-05-04 04:55:46,497 wheel INFO adding 'Bio/Phylo/PAML/yn00.py'
2025-05-04 04:55:46,498 wheel INFO adding 'Bio/PopGen/__init__.py'
2025-05-04 04:55:46,500 wheel INFO adding 'Bio/PopGen/GenePop/Controller.py'
2025-05-04 04:55:46,502 wheel INFO adding 'Bio/PopGen/GenePop/EasyController.py'
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2025-05-04 04:55:46,505 wheel INFO adding 'Bio/PopGen/GenePop/LargeFileParser.py'
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2025-05-04 04:55:46,508 wheel INFO adding 'Bio/Restriction/PrintFormat.py'
2025-05-04 04:55:46,511 wheel INFO adding 'Bio/Restriction/Restriction.py'
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2025-05-04 04:55:46,531 wheel INFO adding 'Bio/SCOP/Cla.py'
2025-05-04 04:55:46,533 wheel INFO adding 'Bio/SCOP/Des.py'
2025-05-04 04:55:46,534 wheel INFO adding 'Bio/SCOP/Dom.py'
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2025-05-04 04:55:46,536 wheel INFO adding 'Bio/SCOP/Raf.py'
2025-05-04 04:55:46,538 wheel INFO adding 'Bio/SCOP/Residues.py'
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2025-05-04 04:55:46,541 wheel INFO adding 'Bio/SVDSuperimposer/__init__.py'
2025-05-04 04:55:46,544 wheel INFO adding 'Bio/SearchIO/BlatIO.py'
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2025-05-04 04:55:46,553 wheel INFO adding 'Bio/SearchIO/BlastIO/__init__.py'
2025-05-04 04:55:46,555 wheel INFO adding 'Bio/SearchIO/BlastIO/blast_tab.py'
2025-05-04 04:55:46,558 wheel INFO adding 'Bio/SearchIO/BlastIO/blast_xml.py'
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2025-05-04 04:55:46,562 wheel INFO adding 'Bio/SearchIO/ExonerateIO/_base.py'
2025-05-04 04:55:46,564 wheel INFO adding 'Bio/SearchIO/ExonerateIO/exonerate_cigar.py'
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2025-05-04 04:55:46,577 wheel INFO adding 'Bio/SearchIO/HmmerIO/hmmer3_domtab.py'
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2025-05-04 04:55:46,586 wheel INFO adding 'Bio/SearchIO/_model/__init__.py'
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2025-05-04 04:55:46,588 wheel INFO adding 'Bio/SearchIO/_model/hit.py'
2025-05-04 04:55:46,590 wheel INFO adding 'Bio/SearchIO/_model/hsp.py'
2025-05-04 04:55:46,593 wheel INFO adding 'Bio/SearchIO/_model/query.py'
2025-05-04 04:55:46,595 wheel INFO adding 'Bio/SeqIO/AbiIO.py'
2025-05-04 04:55:46,597 wheel INFO adding 'Bio/SeqIO/AceIO.py'
2025-05-04 04:55:46,599 wheel INFO adding 'Bio/SeqIO/FastaIO.py'
2025-05-04 04:55:46,601 wheel INFO adding 'Bio/SeqIO/GckIO.py'
2025-05-04 04:55:46,603 wheel INFO adding 'Bio/SeqIO/GfaIO.py'
2025-05-04 04:55:46,604 wheel INFO adding 'Bio/SeqIO/IgIO.py'
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2025-05-04 04:55:46,608 wheel INFO adding 'Bio/SeqIO/Interfaces.py'
2025-05-04 04:55:46,610 wheel INFO adding 'Bio/SeqIO/NibIO.py'
2025-05-04 04:55:46,612 wheel INFO adding 'Bio/SeqIO/PdbIO.py'
2025-05-04 04:55:46,614 wheel INFO adding 'Bio/SeqIO/PhdIO.py'
2025-05-04 04:55:46,615 wheel INFO adding 'Bio/SeqIO/PirIO.py'
2025-05-04 04:55:46,617 wheel INFO adding 'Bio/SeqIO/QualityIO.py'
2025-05-04 04:55:46,621 wheel INFO adding 'Bio/SeqIO/SeqXmlIO.py'
2025-05-04 04:55:46,624 wheel INFO adding 'Bio/SeqIO/SffIO.py'
2025-05-04 04:55:46,626 wheel INFO adding 'Bio/SeqIO/SnapGeneIO.py'
2025-05-04 04:55:46,628 wheel INFO adding 'Bio/SeqIO/SwissIO.py'
2025-05-04 04:55:46,629 wheel INFO adding 'Bio/SeqIO/TabIO.py'
2025-05-04 04:55:46,630 wheel INFO adding 'Bio/SeqIO/TwoBitIO.py'
2025-05-04 04:55:46,632 wheel INFO adding 'Bio/SeqIO/UniprotIO.py'
2025-05-04 04:55:46,634 wheel INFO adding 'Bio/SeqIO/XdnaIO.py'
2025-05-04 04:55:46,636 wheel INFO adding 'Bio/SeqIO/__init__.py'
2025-05-04 04:55:46,638 wheel INFO adding 'Bio/SeqIO/_index.py'
2025-05-04 04:55:46,640 wheel INFO adding 'Bio/SeqIO/_twoBitIO.c'
2025-05-04 04:55:46,642 wheel INFO adding 'Bio/SeqIO/_twoBitIO.cpython-312-riscv64-linux-musl.so'
2025-05-04 04:55:46,644 wheel INFO adding 'Bio/SeqUtils/CheckSum.py'
2025-05-04 04:55:46,646 wheel INFO adding 'Bio/SeqUtils/IsoelectricPoint.py'
2025-05-04 04:55:46,648 wheel INFO adding 'Bio/SeqUtils/MeltingTemp.py'
2025-05-04 04:55:46,650 wheel INFO adding 'Bio/SeqUtils/ProtParam.py'
2025-05-04 04:55:46,652 wheel INFO adding 'Bio/SeqUtils/ProtParamData.py'
2025-05-04 04:55:46,654 wheel INFO adding 'Bio/SeqUtils/__init__.py'
2025-05-04 04:55:46,656 wheel INFO adding 'Bio/SeqUtils/lcc.py'
2025-05-04 04:55:46,658 wheel INFO adding 'Bio/Sequencing/Ace.py'
2025-05-04 04:55:46,660 wheel INFO adding 'Bio/Sequencing/Phd.py'
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2025-05-04 04:55:46,663 wheel INFO adding 'Bio/Sequencing/Applications/_Novoalign.py'
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2025-05-04 04:55:46,666 wheel INFO adding 'Bio/Sequencing/Applications/_bwa.py'
2025-05-04 04:55:46,668 wheel INFO adding 'Bio/Sequencing/Applications/_samtools.py'
2025-05-04 04:55:46,671 wheel INFO adding 'Bio/SwissProt/KeyWList.py'
2025-05-04 04:55:46,672 wheel INFO adding 'Bio/SwissProt/__init__.py'
2025-05-04 04:55:46,675 wheel INFO adding 'Bio/TogoWS/__init__.py'
2025-05-04 04:55:46,677 wheel INFO adding 'Bio/UniGene/__init__.py'
2025-05-04 04:55:46,679 wheel INFO adding 'Bio/UniProt/GOA.py'
2025-05-04 04:55:46,680 wheel INFO adding 'Bio/UniProt/__init__.py'
2025-05-04 04:55:46,682 wheel INFO adding 'Bio/codonalign/__init__.py'
2025-05-04 04:55:46,684 wheel INFO adding 'Bio/codonalign/codonalignment.py'
2025-05-04 04:55:46,686 wheel INFO adding 'Bio/codonalign/codonseq.py'
2025-05-04 04:55:46,689 wheel INFO adding 'Bio/motifs/__init__.py'
2025-05-04 04:55:46,692 wheel INFO adding 'Bio/motifs/_pwm.c'
2025-05-04 04:55:46,693 wheel INFO adding 'Bio/motifs/_pwm.cpython-312-riscv64-linux-musl.so'
2025-05-04 04:55:46,695 wheel INFO adding 'Bio/motifs/alignace.py'
2025-05-04 04:55:46,696 wheel INFO adding 'Bio/motifs/clusterbuster.py'
2025-05-04 04:55:46,697 wheel INFO adding 'Bio/motifs/mast.py'
2025-05-04 04:55:46,699 wheel INFO adding 'Bio/motifs/matrix.py'
2025-05-04 04:55:46,701 wheel INFO adding 'Bio/motifs/meme.py'
2025-05-04 04:55:46,702 wheel INFO adding 'Bio/motifs/minimal.py'
2025-05-04 04:55:46,704 wheel INFO adding 'Bio/motifs/pfm.py'
2025-05-04 04:55:46,705 wheel INFO adding 'Bio/motifs/thresholds.py'
2025-05-04 04:55:46,706 wheel INFO adding 'Bio/motifs/transfac.py'
2025-05-04 04:55:46,708 wheel INFO adding 'Bio/motifs/xms.py'
2025-05-04 04:55:46,710 wheel INFO adding 'Bio/motifs/applications/__init__.py'
2025-05-04 04:55:46,711 wheel INFO adding 'Bio/motifs/applications/_xxmotif.py'
2025-05-04 04:55:46,712 wheel INFO adding 'Bio/motifs/jaspar/__init__.py'
2025-05-04 04:55:46,714 wheel INFO adding 'Bio/motifs/jaspar/db.py'
2025-05-04 04:55:46,716 wheel INFO adding 'Bio/phenotype/__init__.py'
2025-05-04 04:55:46,718 wheel INFO adding 'Bio/phenotype/phen_micro.py'
2025-05-04 04:55:46,721 wheel INFO adding 'Bio/phenotype/pm_fitting.py'
2025-05-04 04:55:46,722 wheel INFO adding 'BioSQL/BioSeq.py'
2025-05-04 04:55:46,725 wheel INFO adding 'BioSQL/BioSeqDatabase.py'
2025-05-04 04:55:46,727 wheel INFO adding 'BioSQL/DBUtils.py'
2025-05-04 04:55:46,728 wheel INFO adding 'BioSQL/Loader.py'
2025-05-04 04:55:46,731 wheel INFO adding 'BioSQL/__init__.py'
2025-05-04 04:55:46,732 wheel INFO adding 'BioSQL/py.typed'
2025-05-04 04:55:46,734 wheel INFO adding 'biopython-1.85.dist-info/licenses/LICENSE'
2025-05-04 04:55:46,736 wheel INFO adding 'biopython-1.85.dist-info/licenses/LICENSE.rst'
2025-05-04 04:55:46,737 wheel INFO adding 'biopython-1.85.dist-info/METADATA'
2025-05-04 04:55:46,739 wheel INFO adding 'biopython-1.85.dist-info/WHEEL'
2025-05-04 04:55:46,740 wheel INFO adding 'biopython-1.85.dist-info/top_level.txt'
2025-05-04 04:55:46,750 wheel INFO adding 'biopython-1.85.dist-info/RECORD'
2025-05-04 04:55:46,765 root INFO removing build/bdist.linux-riscv64/wheel
2025-05-04 04:55:46,857 gpep517 INFO The backend produced .dist/biopython-1.85-cp312-cp312-linux_riscv64.whl
biopython-1.85-cp312-cp312-linux_riscv64.whl
>>> py3-biopython: Entering fakeroot...
>>> py3-biopython-pyc*: Running split function pyc...
'usr/lib/python3.12/site-packages/BioSQL/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/BioSQL/__pycache__'
'usr/lib/python3.12/site-packages/Bio/CAPS/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/CAPS/__pycache__'
'usr/lib/python3.12/site-packages/Bio/GenBank/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/GenBank/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Nexus/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Nexus/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Alphabet/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Alphabet/__pycache__'
'usr/lib/python3.12/site-packages/Bio/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Data/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Data/__pycache__'
'usr/lib/python3.12/site-packages/Bio/UniGene/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/UniGene/__pycache__'
'usr/lib/python3.12/site-packages/Bio/ExPASy/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/ExPASy/__pycache__'
'usr/lib/python3.12/site-packages/Bio/phenotype/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/phenotype/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Phylo/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Phylo/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Phylo/Applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Phylo/Applications/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Phylo/PAML/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Phylo/PAML/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Graphics/GenomeDiagram/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Graphics/GenomeDiagram/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Graphics/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Graphics/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SCOP/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SCOP/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Application/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Application/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/InterproscanIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/InterproscanIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/HmmerIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/HmmerIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/BlastIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/BlastIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/ExonerateIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/ExonerateIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/HHsuiteIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/HHsuiteIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/_model/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/_model/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Blast/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Blast/__pycache__'
'usr/lib/python3.12/site-packages/Bio/UniProt/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/UniProt/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SwissProt/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SwissProt/__pycache__'
'usr/lib/python3.12/site-packages/Bio/codonalign/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/codonalign/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Sequencing/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Sequencing/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Sequencing/Applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Sequencing/Applications/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SeqIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SeqIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/Map/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Map/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/Compound/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Compound/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/Gene/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Gene/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/KGML/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/KGML/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/Enzyme/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Enzyme/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SeqUtils/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SeqUtils/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Geo/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Geo/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Entrez/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Entrez/__pycache__'
'usr/lib/python3.12/site-packages/Bio/TogoWS/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/TogoWS/__pycache__'
'usr/lib/python3.12/site-packages/Bio/PDB/mmtf/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PDB/mmtf/__pycache__'
'usr/lib/python3.12/site-packages/Bio/PDB/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PDB/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Cluster/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Cluster/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SVDSuperimposer/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SVDSuperimposer/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Affy/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Affy/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Pathway/Rep/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Pathway/Rep/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Pathway/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Pathway/__pycache__'
'usr/lib/python3.12/site-packages/Bio/AlignIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/AlignIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Medline/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Medline/__pycache__'
'usr/lib/python3.12/site-packages/Bio/PopGen/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PopGen/__pycache__'
'usr/lib/python3.12/site-packages/Bio/PopGen/GenePop/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PopGen/GenePop/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Emboss/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Emboss/__pycache__'
'usr/lib/python3.12/site-packages/Bio/motifs/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/motifs/__pycache__'
'usr/lib/python3.12/site-packages/Bio/motifs/applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/motifs/applications/__pycache__'
'usr/lib/python3.12/site-packages/Bio/motifs/jaspar/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/motifs/jaspar/__pycache__'
'usr/lib/python3.12/site-packages/Bio/NMR/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/NMR/__pycache__'
'usr/lib/python3.12/site-packages/Bio/HMM/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/HMM/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Compass/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Compass/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Align/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Align/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Align/substitution_matrices/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Align/substitution_matrices/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Align/Applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Align/Applications/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Restriction/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Restriction/__pycache__'
>>> py3-biopython-pyc*: Preparing subpackage py3-biopython-pyc...
>>> py3-biopython-pyc*: Running postcheck for py3-biopython-pyc
>>> py3-biopython*: Running postcheck for py3-biopython
>>> py3-biopython*: Preparing package py3-biopython...
>>> py3-biopython*: Stripping binaries
>>> py3-biopython-pyc*: Scanning shared objects
>>> py3-biopython*: Scanning shared objects
>>> py3-biopython-pyc*: Tracing dependencies...
	py3-numpy
	python3
	python3~3.12
>>> py3-biopython-pyc*: Package size: 6.4 MB
>>> py3-biopython-pyc*: Compressing data...
>>> py3-biopython-pyc*: Create checksum...
>>> py3-biopython-pyc*: Create py3-biopython-pyc-1.85-r0.apk
>>> py3-biopython*: Tracing dependencies...
	py3-numpy
	python3
	python3~3.12
	so:libc.musl-riscv64.so.1
>>> py3-biopython*: Package size: 11.1 MB
>>> py3-biopython*: Compressing data...
>>> py3-biopython*: Create checksum...
>>> py3-biopython*: Create py3-biopython-1.85-r0.apk
>>> py3-biopython: Build complete at Sun, 04 May 2025 04:56:02 +0000 elapsed time 0h 1m 37s
>>> py3-biopython: Cleaning up srcdir
>>> py3-biopython: Cleaning up pkgdir
>>> py3-biopython: Uninstalling dependencies...
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Executing busybox-1.37.0-r16.trigger
OK: 337 MiB in 99 packages
>>> py3-biopython: Updating the community/riscv64 repository index...
>>> py3-biopython: Signing the index...