>>> py3-biopython: Building community/py3-biopython 1.87-r0 (using abuild 3.17.0_rc2-r0) started Mon, 11 May 2026 01:56:44 +0000
>>> py3-biopython: Validating /home/buildozer/aports/community/py3-biopython/APKBUILD...
>>> py3-biopython: Analyzing dependencies...
>>> py3-biopython: Installing for build: build-base py3-numpy python3 py3-gpep517 py3-setuptools py3-wheel py3-numpy-dev python3-dev
( 1/32) Installing libbz2 (1.0.8-r6)
( 2/32) Installing libffi (3.5.2-r1)
( 3/32) Installing gdbm (1.26-r0)
( 4/32) Installing xz-libs (5.8.3-r0)
( 5/32) Installing mpdecimal (4.0.1-r0)
( 6/32) Installing libpanelw (6.6_p20260502-r0)
( 7/32) Installing readline (8.3.3-r1)
( 8/32) Installing sqlite-libs (3.53.1-r0)
( 9/32) Installing python3 (3.14.3-r0)
(10/32) Installing python3-pycache-pyc0 (3.14.3-r0)
(11/32) Installing pyc (3.14.3-r0)
(12/32) Installing py3-numpy-pyc (2.4.4-r0)
(13/32) Installing python3-pyc (3.14.3-r0)
(14/32) Installing libgfortran (15.2.0-r3)
(15/32) Installing openblas (0.3.30-r2)
(16/32) Installing py3-numpy (2.4.4-r0)
(17/32) Installing py3-numpy-tests (2.4.4-r0)
(18/32) Installing py3-installer (1.0.0-r0)
(19/32) Installing py3-installer-pyc (1.0.0-r0)
(20/32) Installing py3-gpep517 (19-r2)
(21/32) Installing py3-gpep517-pyc (19-r2)
(22/32) Installing py3-parsing (3.3.2-r1)
(23/32) Installing py3-parsing-pyc (3.3.2-r1)
(24/32) Installing py3-packaging (26.2-r0)
(25/32) Installing py3-packaging-pyc (26.2-r0)
(26/32) Installing py3-setuptools (82.0.1-r1)
(27/32) Installing py3-setuptools-pyc (82.0.1-r1)
(28/32) Installing py3-wheel (0.47.0-r0)
(29/32) Installing py3-wheel-pyc (0.47.0-r0)
(30/32) Installing py3-numpy-dev (2.4.4-r0)
(31/32) Installing python3-dev (3.14.3-r0)
(32/32) Installing .makedepends-py3-biopython (20260511.015645)
Executing busybox-1.37.0-r31.trigger
OK: 520.2 MiB in 135 packages
>>> py3-biopython: Cleaning up srcdir
>>> py3-biopython: Cleaning up pkgdir
>>> py3-biopython: Cleaning up tmpdir
>>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/v3.24/biopython-1.87.tar.gz
Connecting to distfiles.alpinelinux.org (172.105.82.32:443)
wget: server returned error: HTTP/1.1 404 Not Found
>>> py3-biopython: Fetching https://files.pythonhosted.org/packages/source/b/biopython/biopython-1.87.tar.gz
Connecting to files.pythonhosted.org ([2a04:4e42:400::223]:443)
Connecting to files.pythonhosted.org ([2a04:4e42:400::223]:443)
saving to '/var/cache/distfiles/v3.24/biopython-1.87.tar.gz.part'
biopython-1.87.tar.g 100% |********************************| 18.9M  0:00:00 ETA
'/var/cache/distfiles/v3.24/biopython-1.87.tar.gz.part' saved
/var/cache/distfiles/v3.24/biopython-1.87.tar.gz: OK
>>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/v3.24/biopython-1.87.tar.gz
/var/cache/distfiles/v3.24/biopython-1.87.tar.gz: OK
>>> py3-biopython: Unpacking /var/cache/distfiles/v3.24/biopython-1.87.tar.gz...
2026-05-11 01:56:48,188 gpep517 INFO Building wheel via backend setuptools.build_meta
/usr/lib/python3.14/site-packages/setuptools/config/pyprojecttoml.py:72: _ExperimentalConfiguration: `[tool.setuptools.ext-modules]` in `pyproject.toml` is still *experimental* and likely to change in future releases.
  config = read_configuration(filepath, True, ignore_option_errors, dist)
2026-05-11 01:56:48,232 root INFO running bdist_wheel
2026-05-11 01:56:48,240 root INFO running build
2026-05-11 01:56:48,240 root INFO running build_py
2026-05-11 01:56:48,242 root INFO creating build/lib.linux-armv8l-cpython-314/Bio
2026-05-11 01:56:48,243 root INFO copying Bio/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio
2026-05-11 01:56:48,243 root INFO copying Bio/File.py -> build/lib.linux-armv8l-cpython-314/Bio
2026-05-11 01:56:48,243 root INFO copying Bio/bgzf.py -> build/lib.linux-armv8l-cpython-314/Bio
2026-05-11 01:56:48,244 root INFO copying Bio/Seq.py -> build/lib.linux-armv8l-cpython-314/Bio
2026-05-11 01:56:48,244 root INFO copying Bio/_utils.py -> build/lib.linux-armv8l-cpython-314/Bio
2026-05-11 01:56:48,245 root INFO copying Bio/SeqRecord.py -> build/lib.linux-armv8l-cpython-314/Bio
2026-05-11 01:56:48,245 root INFO copying Bio/SeqFeature.py -> build/lib.linux-armv8l-cpython-314/Bio
2026-05-11 01:56:48,246 root INFO copying Bio/pairwise2.py -> build/lib.linux-armv8l-cpython-314/Bio
2026-05-11 01:56:48,246 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Affy
2026-05-11 01:56:48,246 root INFO copying Bio/Affy/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Affy
2026-05-11 01:56:48,246 root INFO copying Bio/Affy/CelFile.py -> build/lib.linux-armv8l-cpython-314/Bio/Affy
2026-05-11 01:56:48,247 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,247 root INFO copying Bio/Align/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,248 root INFO copying Bio/Align/emboss.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,248 root INFO copying Bio/Align/a2m.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,248 root INFO copying Bio/Align/chain.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,249 root INFO copying Bio/Align/bed.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,249 root INFO copying Bio/Align/psl.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,249 root INFO copying Bio/Align/clustal.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,249 root INFO copying Bio/Align/msf.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,250 root INFO copying Bio/Align/tabular.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,250 root INFO copying Bio/Align/bigpsl.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,250 root INFO copying Bio/Align/phylip.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,250 root INFO copying Bio/Align/exonerate.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,251 root INFO copying Bio/Align/fasta.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,251 root INFO copying Bio/Align/sam.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,251 root INFO copying Bio/Align/AlignInfo.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,252 root INFO copying Bio/Align/stockholm.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,252 root INFO copying Bio/Align/maf.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,252 root INFO copying Bio/Align/mauve.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,252 root INFO copying Bio/Align/nexus.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,253 root INFO copying Bio/Align/bigmaf.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,253 root INFO copying Bio/Align/hhr.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,253 root INFO copying Bio/Align/interfaces.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,253 root INFO copying Bio/Align/analysis.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,254 root INFO copying Bio/Align/bigbed.py -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,254 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices
2026-05-11 01:56:48,254 root INFO copying Bio/Align/substitution_matrices/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices
2026-05-11 01:56:48,255 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/AlignIO
2026-05-11 01:56:48,255 root INFO copying Bio/AlignIO/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/AlignIO
2026-05-11 01:56:48,255 root INFO copying Bio/AlignIO/Interfaces.py -> build/lib.linux-armv8l-cpython-314/Bio/AlignIO
2026-05-11 01:56:48,256 root INFO copying Bio/AlignIO/ClustalIO.py -> build/lib.linux-armv8l-cpython-314/Bio/AlignIO
2026-05-11 01:56:48,256 root INFO copying Bio/AlignIO/PhylipIO.py -> build/lib.linux-armv8l-cpython-314/Bio/AlignIO
2026-05-11 01:56:48,256 root INFO copying Bio/AlignIO/MsfIO.py -> build/lib.linux-armv8l-cpython-314/Bio/AlignIO
2026-05-11 01:56:48,256 root INFO copying Bio/AlignIO/MauveIO.py -> build/lib.linux-armv8l-cpython-314/Bio/AlignIO
2026-05-11 01:56:48,257 root INFO copying Bio/AlignIO/StockholmIO.py -> build/lib.linux-armv8l-cpython-314/Bio/AlignIO
2026-05-11 01:56:48,257 root INFO copying Bio/AlignIO/EmbossIO.py -> build/lib.linux-armv8l-cpython-314/Bio/AlignIO
2026-05-11 01:56:48,257 root INFO copying Bio/AlignIO/FastaIO.py -> build/lib.linux-armv8l-cpython-314/Bio/AlignIO
2026-05-11 01:56:48,257 root INFO copying Bio/AlignIO/MafIO.py -> build/lib.linux-armv8l-cpython-314/Bio/AlignIO
2026-05-11 01:56:48,258 root INFO copying Bio/AlignIO/NexusIO.py -> build/lib.linux-armv8l-cpython-314/Bio/AlignIO
2026-05-11 01:56:48,258 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Alphabet
2026-05-11 01:56:48,258 root INFO copying Bio/Alphabet/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Alphabet
2026-05-11 01:56:48,258 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Blast
2026-05-11 01:56:48,259 root INFO copying Bio/Blast/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Blast
2026-05-11 01:56:48,259 root INFO copying Bio/Blast/_writers.py -> build/lib.linux-armv8l-cpython-314/Bio/Blast
2026-05-11 01:56:48,259 root INFO copying Bio/Blast/NCBIWWW.py -> build/lib.linux-armv8l-cpython-314/Bio/Blast
2026-05-11 01:56:48,259 root INFO copying Bio/Blast/_parser.py -> build/lib.linux-armv8l-cpython-314/Bio/Blast
2026-05-11 01:56:48,260 root INFO copying Bio/Blast/NCBIXML.py -> build/lib.linux-armv8l-cpython-314/Bio/Blast
2026-05-11 01:56:48,260 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/CAPS
2026-05-11 01:56:48,260 root INFO copying Bio/CAPS/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/CAPS
2026-05-11 01:56:48,261 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Cluster
2026-05-11 01:56:48,261 root INFO copying Bio/Cluster/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Cluster
2026-05-11 01:56:48,261 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/codonalign
2026-05-11 01:56:48,261 root INFO copying Bio/codonalign/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/codonalign
2026-05-11 01:56:48,262 root INFO copying Bio/codonalign/codonseq.py -> build/lib.linux-armv8l-cpython-314/Bio/codonalign
2026-05-11 01:56:48,262 root INFO copying Bio/codonalign/codonalignment.py -> build/lib.linux-armv8l-cpython-314/Bio/codonalign
2026-05-11 01:56:48,262 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Compass
2026-05-11 01:56:48,262 root INFO copying Bio/Compass/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Compass
2026-05-11 01:56:48,263 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Data
2026-05-11 01:56:48,263 root INFO copying Bio/Data/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Data
2026-05-11 01:56:48,263 root INFO copying Bio/Data/IUPACData.py -> build/lib.linux-armv8l-cpython-314/Bio/Data
2026-05-11 01:56:48,263 root INFO copying Bio/Data/CodonTable.py -> build/lib.linux-armv8l-cpython-314/Bio/Data
2026-05-11 01:56:48,264 root INFO copying Bio/Data/PDBData.py -> build/lib.linux-armv8l-cpython-314/Bio/Data
2026-05-11 01:56:48,264 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Emboss
2026-05-11 01:56:48,264 root INFO copying Bio/Emboss/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Emboss
2026-05-11 01:56:48,264 root INFO copying Bio/Emboss/Primer3.py -> build/lib.linux-armv8l-cpython-314/Bio/Emboss
2026-05-11 01:56:48,265 root INFO copying Bio/Emboss/PrimerSearch.py -> build/lib.linux-armv8l-cpython-314/Bio/Emboss
2026-05-11 01:56:48,265 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Entrez
2026-05-11 01:56:48,265 root INFO copying Bio/Entrez/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Entrez
2026-05-11 01:56:48,265 root INFO copying Bio/Entrez/Parser.py -> build/lib.linux-armv8l-cpython-314/Bio/Entrez
2026-05-11 01:56:48,266 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/ExPASy
2026-05-11 01:56:48,266 root INFO copying Bio/ExPASy/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/ExPASy
2026-05-11 01:56:48,267 root INFO copying Bio/ExPASy/Prosite.py -> build/lib.linux-armv8l-cpython-314/Bio/ExPASy
2026-05-11 01:56:48,267 root INFO copying Bio/ExPASy/ScanProsite.py -> build/lib.linux-armv8l-cpython-314/Bio/ExPASy
2026-05-11 01:56:48,267 root INFO copying Bio/ExPASy/Prodoc.py -> build/lib.linux-armv8l-cpython-314/Bio/ExPASy
2026-05-11 01:56:48,267 root INFO copying Bio/ExPASy/Enzyme.py -> build/lib.linux-armv8l-cpython-314/Bio/ExPASy
2026-05-11 01:56:48,268 root INFO copying Bio/ExPASy/cellosaurus.py -> build/lib.linux-armv8l-cpython-314/Bio/ExPASy
2026-05-11 01:56:48,268 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/GenBank
2026-05-11 01:56:48,268 root INFO copying Bio/GenBank/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/GenBank
2026-05-11 01:56:48,268 root INFO copying Bio/GenBank/Record.py -> build/lib.linux-armv8l-cpython-314/Bio/GenBank
2026-05-11 01:56:48,269 root INFO copying Bio/GenBank/utils.py -> build/lib.linux-armv8l-cpython-314/Bio/GenBank
2026-05-11 01:56:48,269 root INFO copying Bio/GenBank/Scanner.py -> build/lib.linux-armv8l-cpython-314/Bio/GenBank
2026-05-11 01:56:48,269 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Geo
2026-05-11 01:56:48,269 root INFO copying Bio/Geo/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Geo
2026-05-11 01:56:48,270 root INFO copying Bio/Geo/Record.py -> build/lib.linux-armv8l-cpython-314/Bio/Geo
2026-05-11 01:56:48,270 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Graphics
2026-05-11 01:56:48,270 root INFO copying Bio/Graphics/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics
2026-05-11 01:56:48,270 root INFO copying Bio/Graphics/BasicChromosome.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics
2026-05-11 01:56:48,271 root INFO copying Bio/Graphics/KGML_vis.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics
2026-05-11 01:56:48,271 root INFO copying Bio/Graphics/Comparative.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics
2026-05-11 01:56:48,271 root INFO copying Bio/Graphics/ColorSpiral.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics
2026-05-11 01:56:48,271 root INFO copying Bio/Graphics/DisplayRepresentation.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics
2026-05-11 01:56:48,272 root INFO copying Bio/Graphics/Distribution.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics
2026-05-11 01:56:48,272 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram
2026-05-11 01:56:48,272 root INFO copying Bio/Graphics/GenomeDiagram/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram
2026-05-11 01:56:48,272 root INFO copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram
2026-05-11 01:56:48,273 root INFO copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram
2026-05-11 01:56:48,273 root INFO copying Bio/Graphics/GenomeDiagram/_Diagram.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram
2026-05-11 01:56:48,273 root INFO copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram
2026-05-11 01:56:48,273 root INFO copying Bio/Graphics/GenomeDiagram/_Track.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram
2026-05-11 01:56:48,274 root INFO copying Bio/Graphics/GenomeDiagram/_Colors.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram
2026-05-11 01:56:48,274 root INFO copying Bio/Graphics/GenomeDiagram/_Feature.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram
2026-05-11 01:56:48,274 root INFO copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram
2026-05-11 01:56:48,275 root INFO copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram
2026-05-11 01:56:48,275 root INFO copying Bio/Graphics/GenomeDiagram/_Graph.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram
2026-05-11 01:56:48,275 root INFO copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram
2026-05-11 01:56:48,275 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/HMM
2026-05-11 01:56:48,276 root INFO copying Bio/HMM/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/HMM
2026-05-11 01:56:48,276 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/KEGG
2026-05-11 01:56:48,276 root INFO copying Bio/KEGG/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/KEGG
2026-05-11 01:56:48,276 root INFO copying Bio/KEGG/REST.py -> build/lib.linux-armv8l-cpython-314/Bio/KEGG
2026-05-11 01:56:48,277 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/KEGG/Compound
2026-05-11 01:56:48,277 root INFO copying Bio/KEGG/Compound/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/KEGG/Compound
2026-05-11 01:56:48,277 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/KEGG/Enzyme
2026-05-11 01:56:48,277 root INFO copying Bio/KEGG/Enzyme/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/KEGG/Enzyme
2026-05-11 01:56:48,277 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/KEGG/Gene
2026-05-11 01:56:48,278 root INFO copying Bio/KEGG/Gene/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/KEGG/Gene
2026-05-11 01:56:48,278 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/KEGG/Map
2026-05-11 01:56:48,278 root INFO copying Bio/KEGG/Map/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/KEGG/Map
2026-05-11 01:56:48,278 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/KEGG/KGML
2026-05-11 01:56:48,278 root INFO copying Bio/KEGG/KGML/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/KEGG/KGML
2026-05-11 01:56:48,279 root INFO copying Bio/KEGG/KGML/KGML_pathway.py -> build/lib.linux-armv8l-cpython-314/Bio/KEGG/KGML
2026-05-11 01:56:48,279 root INFO copying Bio/KEGG/KGML/KGML_parser.py -> build/lib.linux-armv8l-cpython-314/Bio/KEGG/KGML
2026-05-11 01:56:48,279 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Medline
2026-05-11 01:56:48,279 root INFO copying Bio/Medline/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Medline
2026-05-11 01:56:48,280 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/motifs
2026-05-11 01:56:48,280 root INFO copying Bio/motifs/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/motifs
2026-05-11 01:56:48,280 root INFO copying Bio/motifs/transfac.py -> build/lib.linux-armv8l-cpython-314/Bio/motifs
2026-05-11 01:56:48,280 root INFO copying Bio/motifs/alignace.py -> build/lib.linux-armv8l-cpython-314/Bio/motifs
2026-05-11 01:56:48,281 root INFO copying Bio/motifs/minimal.py -> build/lib.linux-armv8l-cpython-314/Bio/motifs
2026-05-11 01:56:48,281 root INFO copying Bio/motifs/pfm.py -> build/lib.linux-armv8l-cpython-314/Bio/motifs
2026-05-11 01:56:48,281 root INFO copying Bio/motifs/xms.py -> build/lib.linux-armv8l-cpython-314/Bio/motifs
2026-05-11 01:56:48,281 root INFO copying Bio/motifs/meme.py -> build/lib.linux-armv8l-cpython-314/Bio/motifs
2026-05-11 01:56:48,282 root INFO copying Bio/motifs/mast.py -> build/lib.linux-armv8l-cpython-314/Bio/motifs
2026-05-11 01:56:48,282 root INFO copying Bio/motifs/clusterbuster.py -> build/lib.linux-armv8l-cpython-314/Bio/motifs
2026-05-11 01:56:48,282 root INFO copying Bio/motifs/matrix.py -> build/lib.linux-armv8l-cpython-314/Bio/motifs
2026-05-11 01:56:48,282 root INFO copying Bio/motifs/thresholds.py -> build/lib.linux-armv8l-cpython-314/Bio/motifs
2026-05-11 01:56:48,283 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/motifs/jaspar
2026-05-11 01:56:48,283 root INFO copying Bio/motifs/jaspar/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/motifs/jaspar
2026-05-11 01:56:48,283 root INFO copying Bio/motifs/jaspar/db.py -> build/lib.linux-armv8l-cpython-314/Bio/motifs/jaspar
2026-05-11 01:56:48,283 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Nexus
2026-05-11 01:56:48,284 root INFO copying Bio/Nexus/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Nexus
2026-05-11 01:56:48,284 root INFO copying Bio/Nexus/StandardData.py -> build/lib.linux-armv8l-cpython-314/Bio/Nexus
2026-05-11 01:56:48,284 root INFO copying Bio/Nexus/Nexus.py -> build/lib.linux-armv8l-cpython-314/Bio/Nexus
2026-05-11 01:56:48,284 root INFO copying Bio/Nexus/Trees.py -> build/lib.linux-armv8l-cpython-314/Bio/Nexus
2026-05-11 01:56:48,285 root INFO copying Bio/Nexus/Nodes.py -> build/lib.linux-armv8l-cpython-314/Bio/Nexus
2026-05-11 01:56:48,285 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/NMR
2026-05-11 01:56:48,285 root INFO copying Bio/NMR/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/NMR
2026-05-11 01:56:48,285 root INFO copying Bio/NMR/xpktools.py -> build/lib.linux-armv8l-cpython-314/Bio/NMR
2026-05-11 01:56:48,286 root INFO copying Bio/NMR/NOEtools.py -> build/lib.linux-armv8l-cpython-314/Bio/NMR
2026-05-11 01:56:48,286 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Pathway
2026-05-11 01:56:48,286 root INFO copying Bio/Pathway/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Pathway
2026-05-11 01:56:48,286 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Pathway/Rep
2026-05-11 01:56:48,287 root INFO copying Bio/Pathway/Rep/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Pathway/Rep
2026-05-11 01:56:48,287 root INFO copying Bio/Pathway/Rep/Graph.py -> build/lib.linux-armv8l-cpython-314/Bio/Pathway/Rep
2026-05-11 01:56:48,287 root INFO copying Bio/Pathway/Rep/MultiGraph.py -> build/lib.linux-armv8l-cpython-314/Bio/Pathway/Rep
2026-05-11 01:56:48,288 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,288 root INFO copying Bio/PDB/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,288 root INFO copying Bio/PDB/ic_rebuild.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,288 root INFO copying Bio/PDB/MMCIFParser.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,288 root INFO copying Bio/PDB/qcprot.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,289 root INFO copying Bio/PDB/Entity.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,289 root INFO copying Bio/PDB/DSSP.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,289 root INFO copying Bio/PDB/mmcifio.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,289 root INFO copying Bio/PDB/Dice.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,290 root INFO copying Bio/PDB/PDBIO.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,290 root INFO copying Bio/PDB/StructureAlignment.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,290 root INFO copying Bio/PDB/cealign.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,290 root INFO copying Bio/PDB/SCADIO.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,291 root INFO copying Bio/PDB/ic_data.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,291 root INFO copying Bio/PDB/PDBList.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,291 root INFO copying Bio/PDB/binary_cif.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,292 root INFO copying Bio/PDB/NeighborSearch.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,292 root INFO copying Bio/PDB/PDBMLParser.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,292 root INFO copying Bio/PDB/vectors.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,292 root INFO copying Bio/PDB/StructureBuilder.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,293 root INFO copying Bio/PDB/SASA.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,293 root INFO copying Bio/PDB/MMCIF2Dict.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,293 root INFO copying Bio/PDB/internal_coords.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,294 root INFO copying Bio/PDB/PDBParser.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,294 root INFO copying Bio/PDB/Structure.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,294 root INFO copying Bio/PDB/Selection.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,294 root INFO copying Bio/PDB/PSEA.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,295 root INFO copying Bio/PDB/alphafold_db.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,295 root INFO copying Bio/PDB/Model.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,295 root INFO copying Bio/PDB/PDBExceptions.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,295 root INFO copying Bio/PDB/Polypeptide.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,295 root INFO copying Bio/PDB/AbstractPropertyMap.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,296 root INFO copying Bio/PDB/Atom.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,296 root INFO copying Bio/PDB/NACCESS.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,296 root INFO copying Bio/PDB/ResidueDepth.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,296 root INFO copying Bio/PDB/parse_pdb_header.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,297 root INFO copying Bio/PDB/PICIO.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,297 root INFO copying Bio/PDB/Superimposer.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,297 root INFO copying Bio/PDB/FragmentMapper.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,297 root INFO copying Bio/PDB/Chain.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,298 root INFO copying Bio/PDB/Residue.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,298 root INFO copying Bio/PDB/HSExposure.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,298 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/PDB/mmtf
2026-05-11 01:56:48,298 root INFO copying Bio/PDB/mmtf/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB/mmtf
2026-05-11 01:56:48,299 root INFO copying Bio/PDB/mmtf/mmtfio.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB/mmtf
2026-05-11 01:56:48,299 root INFO copying Bio/PDB/mmtf/DefaultParser.py -> build/lib.linux-armv8l-cpython-314/Bio/PDB/mmtf
2026-05-11 01:56:48,299 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/phenotype
2026-05-11 01:56:48,299 root INFO copying Bio/phenotype/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/phenotype
2026-05-11 01:56:48,300 root INFO copying Bio/phenotype/phen_micro.py -> build/lib.linux-armv8l-cpython-314/Bio/phenotype
2026-05-11 01:56:48,300 root INFO copying Bio/phenotype/pm_fitting.py -> build/lib.linux-armv8l-cpython-314/Bio/phenotype
2026-05-11 01:56:48,300 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/PopGen
2026-05-11 01:56:48,300 root INFO copying Bio/PopGen/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/PopGen
2026-05-11 01:56:48,301 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/PopGen/GenePop
2026-05-11 01:56:48,301 root INFO copying Bio/PopGen/GenePop/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/PopGen/GenePop
2026-05-11 01:56:48,301 root INFO copying Bio/PopGen/GenePop/LargeFileParser.py -> build/lib.linux-armv8l-cpython-314/Bio/PopGen/GenePop
2026-05-11 01:56:48,301 root INFO copying Bio/PopGen/GenePop/FileParser.py -> build/lib.linux-armv8l-cpython-314/Bio/PopGen/GenePop
2026-05-11 01:56:48,302 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Restriction
2026-05-11 01:56:48,302 root INFO copying Bio/Restriction/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Restriction
2026-05-11 01:56:48,302 root INFO copying Bio/Restriction/PrintFormat.py -> build/lib.linux-armv8l-cpython-314/Bio/Restriction
2026-05-11 01:56:48,302 root INFO copying Bio/Restriction/Restriction_Dictionary.py -> build/lib.linux-armv8l-cpython-314/Bio/Restriction
2026-05-11 01:56:48,303 root INFO copying Bio/Restriction/Restriction.py -> build/lib.linux-armv8l-cpython-314/Bio/Restriction
2026-05-11 01:56:48,304 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/SCOP
2026-05-11 01:56:48,304 root INFO copying Bio/SCOP/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/SCOP
2026-05-11 01:56:48,304 root INFO copying Bio/SCOP/Hie.py -> build/lib.linux-armv8l-cpython-314/Bio/SCOP
2026-05-11 01:56:48,305 root INFO copying Bio/SCOP/Raf.py -> build/lib.linux-armv8l-cpython-314/Bio/SCOP
2026-05-11 01:56:48,305 root INFO copying Bio/SCOP/Dom.py -> build/lib.linux-armv8l-cpython-314/Bio/SCOP
2026-05-11 01:56:48,305 root INFO copying Bio/SCOP/Cla.py -> build/lib.linux-armv8l-cpython-314/Bio/SCOP
2026-05-11 01:56:48,305 root INFO copying Bio/SCOP/Des.py -> build/lib.linux-armv8l-cpython-314/Bio/SCOP
2026-05-11 01:56:48,306 root INFO copying Bio/SCOP/Residues.py -> build/lib.linux-armv8l-cpython-314/Bio/SCOP
2026-05-11 01:56:48,306 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/SearchIO
2026-05-11 01:56:48,306 root INFO copying Bio/SearchIO/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO
2026-05-11 01:56:48,306 root INFO copying Bio/SearchIO/_index.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO
2026-05-11 01:56:48,307 root INFO copying Bio/SearchIO/_utils.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO
2026-05-11 01:56:48,307 root INFO copying Bio/SearchIO/FastaIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO
2026-05-11 01:56:48,307 root INFO copying Bio/SearchIO/BlatIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO
2026-05-11 01:56:48,307 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/SearchIO/_model
2026-05-11 01:56:48,308 root INFO copying Bio/SearchIO/_model/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/_model
2026-05-11 01:56:48,308 root INFO copying Bio/SearchIO/_model/query.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/_model
2026-05-11 01:56:48,308 root INFO copying Bio/SearchIO/_model/hit.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/_model
2026-05-11 01:56:48,308 root INFO copying Bio/SearchIO/_model/hsp.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/_model
2026-05-11 01:56:48,309 root INFO copying Bio/SearchIO/_model/_base.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/_model
2026-05-11 01:56:48,309 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/SearchIO/BlastIO
2026-05-11 01:56:48,309 root INFO copying Bio/SearchIO/BlastIO/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/BlastIO
2026-05-11 01:56:48,309 root INFO copying Bio/SearchIO/BlastIO/blast_xml.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/BlastIO
2026-05-11 01:56:48,310 root INFO copying Bio/SearchIO/BlastIO/blast_tab.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/BlastIO
2026-05-11 01:56:48,310 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/SearchIO/HHsuiteIO
2026-05-11 01:56:48,310 root INFO copying Bio/SearchIO/HHsuiteIO/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/HHsuiteIO
2026-05-11 01:56:48,310 root INFO copying Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/HHsuiteIO
2026-05-11 01:56:48,311 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/SearchIO/HmmerIO
2026-05-11 01:56:48,311 root INFO copying Bio/SearchIO/HmmerIO/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/HmmerIO
2026-05-11 01:56:48,311 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/HmmerIO
2026-05-11 01:56:48,311 root INFO copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/HmmerIO
2026-05-11 01:56:48,312 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/HmmerIO
2026-05-11 01:56:48,312 root INFO copying Bio/SearchIO/HmmerIO/_base.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/HmmerIO
2026-05-11 01:56:48,312 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/HmmerIO
2026-05-11 01:56:48,312 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/SearchIO/InfernalIO
2026-05-11 01:56:48,313 root INFO copying Bio/SearchIO/InfernalIO/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/InfernalIO
2026-05-11 01:56:48,313 root INFO copying Bio/SearchIO/InfernalIO/infernal_tab.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/InfernalIO
2026-05-11 01:56:48,313 root INFO copying Bio/SearchIO/InfernalIO/infernal_text.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/InfernalIO
2026-05-11 01:56:48,313 root INFO copying Bio/SearchIO/InfernalIO/_base.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/InfernalIO
2026-05-11 01:56:48,314 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/SearchIO/ExonerateIO
2026-05-11 01:56:48,314 root INFO copying Bio/SearchIO/ExonerateIO/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/ExonerateIO
2026-05-11 01:56:48,314 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/ExonerateIO
2026-05-11 01:56:48,314 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/ExonerateIO
2026-05-11 01:56:48,315 root INFO copying Bio/SearchIO/ExonerateIO/_base.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/ExonerateIO
2026-05-11 01:56:48,315 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/ExonerateIO
2026-05-11 01:56:48,315 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/SearchIO/InterproscanIO
2026-05-11 01:56:48,315 root INFO copying Bio/SearchIO/InterproscanIO/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/InterproscanIO
2026-05-11 01:56:48,316 root INFO copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/lib.linux-armv8l-cpython-314/Bio/SearchIO/InterproscanIO
2026-05-11 01:56:48,316 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,316 root INFO copying Bio/SeqIO/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,317 root INFO copying Bio/SeqIO/QualityIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,317 root INFO copying Bio/SeqIO/PhdIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,317 root INFO copying Bio/SeqIO/SffIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,317 root INFO copying Bio/SeqIO/_index.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,318 root INFO copying Bio/SeqIO/Interfaces.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,318 root INFO copying Bio/SeqIO/PirIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,318 root INFO copying Bio/SeqIO/SwissIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,318 root INFO copying Bio/SeqIO/InsdcIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,319 root INFO copying Bio/SeqIO/GfaIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,319 root INFO copying Bio/SeqIO/IgIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,319 root INFO copying Bio/SeqIO/XdnaIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,320 root INFO copying Bio/SeqIO/AceIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,320 root INFO copying Bio/SeqIO/AbiIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,320 root INFO copying Bio/SeqIO/PdbIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,320 root INFO copying Bio/SeqIO/UniprotIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,321 root INFO copying Bio/SeqIO/SnapGeneIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,321 root INFO copying Bio/SeqIO/TwoBitIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,321 root INFO copying Bio/SeqIO/SeqXmlIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,321 root INFO copying Bio/SeqIO/NibIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,322 root INFO copying Bio/SeqIO/FastaIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,322 root INFO copying Bio/SeqIO/GckIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,322 root INFO copying Bio/SeqIO/TabIO.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,323 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/SeqUtils
2026-05-11 01:56:48,323 root INFO copying Bio/SeqUtils/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqUtils
2026-05-11 01:56:48,323 root INFO copying Bio/SeqUtils/ProtParam.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqUtils
2026-05-11 01:56:48,323 root INFO copying Bio/SeqUtils/CheckSum.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqUtils
2026-05-11 01:56:48,323 root INFO copying Bio/SeqUtils/lcc.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqUtils
2026-05-11 01:56:48,324 root INFO copying Bio/SeqUtils/MeltingTemp.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqUtils
2026-05-11 01:56:48,324 root INFO copying Bio/SeqUtils/ProtParamData.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqUtils
2026-05-11 01:56:48,324 root INFO copying Bio/SeqUtils/IsoelectricPoint.py -> build/lib.linux-armv8l-cpython-314/Bio/SeqUtils
2026-05-11 01:56:48,325 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Sequencing
2026-05-11 01:56:48,325 root INFO copying Bio/Sequencing/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Sequencing
2026-05-11 01:56:48,325 root INFO copying Bio/Sequencing/Ace.py -> build/lib.linux-armv8l-cpython-314/Bio/Sequencing
2026-05-11 01:56:48,325 root INFO copying Bio/Sequencing/Phd.py -> build/lib.linux-armv8l-cpython-314/Bio/Sequencing
2026-05-11 01:56:48,326 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/SVDSuperimposer
2026-05-11 01:56:48,326 root INFO copying Bio/SVDSuperimposer/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/SVDSuperimposer
2026-05-11 01:56:48,326 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/SwissProt
2026-05-11 01:56:48,326 root INFO copying Bio/SwissProt/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/SwissProt
2026-05-11 01:56:48,327 root INFO copying Bio/SwissProt/KeyWList.py -> build/lib.linux-armv8l-cpython-314/Bio/SwissProt
2026-05-11 01:56:48,327 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/TogoWS
2026-05-11 01:56:48,327 root INFO copying Bio/TogoWS/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/TogoWS
2026-05-11 01:56:48,327 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Phylo
2026-05-11 01:56:48,328 root INFO copying Bio/Phylo/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo
2026-05-11 01:56:48,328 root INFO copying Bio/Phylo/_cdao_owl.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo
2026-05-11 01:56:48,328 root INFO copying Bio/Phylo/TreeConstruction.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo
2026-05-11 01:56:48,329 root INFO copying Bio/Phylo/Newick.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo
2026-05-11 01:56:48,329 root INFO copying Bio/Phylo/Consensus.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo
2026-05-11 01:56:48,329 root INFO copying Bio/Phylo/NeXML.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo
2026-05-11 01:56:48,329 root INFO copying Bio/Phylo/PhyloXMLIO.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo
2026-05-11 01:56:48,330 root INFO copying Bio/Phylo/BaseTree.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo
2026-05-11 01:56:48,330 root INFO copying Bio/Phylo/_utils.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo
2026-05-11 01:56:48,330 root INFO copying Bio/Phylo/_io.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo
2026-05-11 01:56:48,330 root INFO copying Bio/Phylo/NewickIO.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo
2026-05-11 01:56:48,331 root INFO copying Bio/Phylo/CDAOIO.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo
2026-05-11 01:56:48,331 root INFO copying Bio/Phylo/NeXMLIO.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo
2026-05-11 01:56:48,331 root INFO copying Bio/Phylo/CDAO.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo
2026-05-11 01:56:48,331 root INFO copying Bio/Phylo/PhyloXML.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo
2026-05-11 01:56:48,332 root INFO copying Bio/Phylo/NexusIO.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo
2026-05-11 01:56:48,332 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML
2026-05-11 01:56:48,332 root INFO copying Bio/Phylo/PAML/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML
2026-05-11 01:56:48,332 root INFO copying Bio/Phylo/PAML/codeml.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML
2026-05-11 01:56:48,333 root INFO copying Bio/Phylo/PAML/baseml.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML
2026-05-11 01:56:48,333 root INFO copying Bio/Phylo/PAML/_parse_codeml.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML
2026-05-11 01:56:48,333 root INFO copying Bio/Phylo/PAML/_parse_yn00.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML
2026-05-11 01:56:48,333 root INFO copying Bio/Phylo/PAML/_paml.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML
2026-05-11 01:56:48,334 root INFO copying Bio/Phylo/PAML/_parse_baseml.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML
2026-05-11 01:56:48,334 root INFO copying Bio/Phylo/PAML/yn00.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML
2026-05-11 01:56:48,334 root INFO copying Bio/Phylo/PAML/chi2.py -> build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML
2026-05-11 01:56:48,334 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/UniGene
2026-05-11 01:56:48,335 root INFO copying Bio/UniGene/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/UniGene
2026-05-11 01:56:48,335 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/UniProt
2026-05-11 01:56:48,335 root INFO copying Bio/UniProt/__init__.py -> build/lib.linux-armv8l-cpython-314/Bio/UniProt
2026-05-11 01:56:48,335 root INFO copying Bio/UniProt/GOA.py -> build/lib.linux-armv8l-cpython-314/Bio/UniProt
2026-05-11 01:56:48,336 root INFO creating build/lib.linux-armv8l-cpython-314/BioSQL
2026-05-11 01:56:48,336 root INFO copying BioSQL/__init__.py -> build/lib.linux-armv8l-cpython-314/BioSQL
2026-05-11 01:56:48,336 root INFO copying BioSQL/BioSeqDatabase.py -> build/lib.linux-armv8l-cpython-314/BioSQL
2026-05-11 01:56:48,336 root INFO copying BioSQL/Loader.py -> build/lib.linux-armv8l-cpython-314/BioSQL
2026-05-11 01:56:48,337 root INFO copying BioSQL/BioSeq.py -> build/lib.linux-armv8l-cpython-314/BioSQL
2026-05-11 01:56:48,337 root INFO copying BioSQL/DBUtils.py -> build/lib.linux-armv8l-cpython-314/BioSQL
2026-05-11 01:56:48,337 root INFO running egg_info
2026-05-11 01:56:48,339 root INFO writing biopython.egg-info/PKG-INFO
2026-05-11 01:56:48,340 root INFO writing dependency_links to biopython.egg-info/dependency_links.txt
2026-05-11 01:56:48,340 root INFO writing requirements to biopython.egg-info/requires.txt
2026-05-11 01:56:48,340 root INFO writing top-level names to biopython.egg-info/top_level.txt
2026-05-11 01:56:48,353 root INFO reading manifest file 'biopython.egg-info/SOURCES.txt'
2026-05-11 01:56:48,382 root INFO reading manifest template 'MANIFEST.in'
2026-05-11 01:56:48,442 root WARNING warning: no previously-included files found matching 'Doc/_build'
2026-05-11 01:56:48,446 root WARNING warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip'
2026-05-11 01:56:48,448 root WARNING warning: no previously-included files matching '*.pyc' found anywhere in distribution
2026-05-11 01:56:48,451 root WARNING warning: no previously-included files matching '*.pyo' found anywhere in distribution
2026-05-11 01:56:48,454 root WARNING warning: no previously-included files matching '*.py{}' found anywhere in distribution
2026-05-11 01:56:48,457 root WARNING warning: no previously-included files matching '*.py-e' found anywhere in distribution
2026-05-11 01:56:48,462 root WARNING warning: no previously-included files found matching 'Bio/Align/substitution_matrices/data/README.txt'
2026-05-11 01:56:48,462 root INFO adding license file 'LICENSE.rst'
2026-05-11 01:56:48,494 root INFO writing manifest file 'biopython.egg-info/SOURCES.txt'
2026-05-11 01:56:48,513 root INFO copying Bio/cpairwise2module.c -> build/lib.linux-armv8l-cpython-314/Bio
2026-05-11 01:56:48,514 root INFO copying Bio/py.typed -> build/lib.linux-armv8l-cpython-314/Bio
2026-05-11 01:56:48,514 root INFO copying Bio/Align/_aligncore.c -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,514 root INFO copying Bio/Align/_alignmentcounts.c -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,514 root INFO copying Bio/Align/_codonaligner.c -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,515 root INFO copying Bio/Align/_pairwisealigner.c -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,515 root INFO copying Bio/Align/_pairwisealigner.h -> build/lib.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,516 root INFO copying Bio/Align/substitution_matrices/_arraycore.c -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices
2026-05-11 01:56:48,516 root INFO copying Bio/Align/substitution_matrices/_arraycore.h -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices
2026-05-11 01:56:48,516 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,516 root INFO copying Bio/Align/substitution_matrices/data/BENNER22 -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,517 root INFO copying Bio/Align/substitution_matrices/data/BENNER6 -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,517 root INFO copying Bio/Align/substitution_matrices/data/BENNER74 -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,517 root INFO copying Bio/Align/substitution_matrices/data/BLASTN -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,517 root INFO copying Bio/Align/substitution_matrices/data/BLASTP -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,517 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM45 -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,518 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM50 -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,518 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM62 -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,518 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM80 -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,518 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM90 -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,519 root INFO copying Bio/Align/substitution_matrices/data/DAYHOFF -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,519 root INFO copying Bio/Align/substitution_matrices/data/FENG -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,519 root INFO copying Bio/Align/substitution_matrices/data/GENETIC -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,519 root INFO copying Bio/Align/substitution_matrices/data/GONNET1992 -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,519 root INFO copying Bio/Align/substitution_matrices/data/HOXD70 -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,520 root INFO copying Bio/Align/substitution_matrices/data/JOHNSON -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,520 root INFO copying Bio/Align/substitution_matrices/data/JONES -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,520 root INFO copying Bio/Align/substitution_matrices/data/LEVIN -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,520 root INFO copying Bio/Align/substitution_matrices/data/MCLACHLAN -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,521 root INFO copying Bio/Align/substitution_matrices/data/MDM78 -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,521 root INFO copying Bio/Align/substitution_matrices/data/MEGABLAST -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,521 root INFO copying Bio/Align/substitution_matrices/data/NUC.4.4 -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,521 root INFO copying Bio/Align/substitution_matrices/data/PAM250 -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,521 root INFO copying Bio/Align/substitution_matrices/data/PAM30 -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,522 root INFO copying Bio/Align/substitution_matrices/data/PAM70 -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,522 root INFO copying Bio/Align/substitution_matrices/data/RAO -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,522 root INFO copying Bio/Align/substitution_matrices/data/RISLER -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,522 root INFO copying Bio/Align/substitution_matrices/data/SCHNEIDER -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,523 root INFO copying Bio/Align/substitution_matrices/data/STR -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,523 root INFO copying Bio/Align/substitution_matrices/data/TRANS -> build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data
2026-05-11 01:56:48,523 root INFO copying Bio/Cluster/cluster.c -> build/lib.linux-armv8l-cpython-314/Bio/Cluster
2026-05-11 01:56:48,524 root INFO copying Bio/Cluster/cluster.h -> build/lib.linux-armv8l-cpython-314/Bio/Cluster
2026-05-11 01:56:48,524 root INFO copying Bio/Cluster/clustermodule.c -> build/lib.linux-armv8l-cpython-314/Bio/Cluster
2026-05-11 01:56:48,524 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,524 root INFO copying Bio/Entrez/DTDs/BITS-embedded-index2.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,525 root INFO copying Bio/Entrez/DTDs/BITS-question-answer2.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,525 root INFO copying Bio/Entrez/DTDs/Docsum_3_0.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,525 root INFO copying Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,525 root INFO copying Bio/Entrez/DTDs/Docsum_3_1.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,526 root INFO copying Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,526 root INFO copying Bio/Entrez/DTDs/Docsum_3_2.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,526 root INFO copying Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,526 root INFO copying Bio/Entrez/DTDs/Docsum_3_3.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,527 root INFO copying Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,527 root INFO copying Bio/Entrez/DTDs/Docsum_3_4.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,527 root INFO copying Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,528 root INFO copying Bio/Entrez/DTDs/EMBL_General.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,528 root INFO copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,528 root INFO copying Bio/Entrez/DTDs/GenBank_General.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,528 root INFO copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,528 root INFO copying Bio/Entrez/DTDs/HomoloGene.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,529 root INFO copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,529 root INFO copying Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,529 root INFO copying Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,529 root INFO copying Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,530 root INFO copying Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,530 root INFO copying Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,530 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,531 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,531 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,531 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,532 root INFO copying Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,532 root INFO copying Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,532 root INFO copying Bio/Entrez/DTDs/JATS-chars1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,533 root INFO copying Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,533 root INFO copying Bio/Entrez/DTDs/JATS-common1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,533 root INFO copying Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,534 root INFO copying Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,534 root INFO copying Bio/Entrez/DTDs/JATS-display1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,535 root INFO copying Bio/Entrez/DTDs/JATS-format1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,535 root INFO copying Bio/Entrez/DTDs/JATS-funding1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,535 root INFO copying Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,536 root INFO copying Bio/Entrez/DTDs/JATS-link1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,536 root INFO copying Bio/Entrez/DTDs/JATS-list1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,536 root INFO copying Bio/Entrez/DTDs/JATS-math1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,536 root INFO copying Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
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2026-05-11 01:56:48,571 root INFO copying Bio/Entrez/DTDs/bookdoc_130101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,572 root INFO copying Bio/Entrez/DTDs/bookdoc_140101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,572 root INFO copying Bio/Entrez/DTDs/bookdoc_150101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,572 root INFO copying Bio/Entrez/DTDs/chars.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,572 root INFO copying Bio/Entrez/DTDs/common.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,573 root INFO copying Bio/Entrez/DTDs/default-classes.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,573 root INFO copying Bio/Entrez/DTDs/default-mixes.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,573 root INFO copying Bio/Entrez/DTDs/display.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,574 root INFO copying Bio/Entrez/DTDs/eInfo_020511.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,574 root INFO copying Bio/Entrez/DTDs/eLink_090910.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,574 root INFO copying Bio/Entrez/DTDs/eLink_101123.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,574 root INFO copying Bio/Entrez/DTDs/ePost_020511.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,575 root INFO copying Bio/Entrez/DTDs/eSearch_020511.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,575 root INFO copying Bio/Entrez/DTDs/eSpell.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,575 root INFO copying Bio/Entrez/DTDs/eSummary_041029.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,575 root INFO copying Bio/Entrez/DTDs/egquery.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,576 root INFO copying Bio/Entrez/DTDs/einfo.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,576 root INFO copying Bio/Entrez/DTDs/elink.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,576 root INFO copying Bio/Entrez/DTDs/elink_020122.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,576 root INFO copying Bio/Entrez/DTDs/epost.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,577 root INFO copying Bio/Entrez/DTDs/esearch.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,577 root INFO copying Bio/Entrez/DTDs/esummary-v1.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,577 root INFO copying Bio/Entrez/DTDs/esummary_clinvar.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,577 root INFO copying Bio/Entrez/DTDs/esummary_gene.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,577 root INFO copying Bio/Entrez/DTDs/format.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,578 root INFO copying Bio/Entrez/DTDs/htmltable.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,578 root INFO copying Bio/Entrez/DTDs/isoamsa.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,578 root INFO copying Bio/Entrez/DTDs/isoamsb.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,578 root INFO copying Bio/Entrez/DTDs/isoamsc.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,579 root INFO copying Bio/Entrez/DTDs/isoamsn.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,579 root INFO copying Bio/Entrez/DTDs/isoamso.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,579 root INFO copying Bio/Entrez/DTDs/isoamsr.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,579 root INFO copying Bio/Entrez/DTDs/isobox.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,580 root INFO copying Bio/Entrez/DTDs/isocyr1.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,580 root INFO copying Bio/Entrez/DTDs/isocyr2.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,580 root INFO copying Bio/Entrez/DTDs/isodia.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,580 root INFO copying Bio/Entrez/DTDs/isogrk1.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,581 root INFO copying Bio/Entrez/DTDs/isogrk2.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,581 root INFO copying Bio/Entrez/DTDs/isogrk3.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,581 root INFO copying Bio/Entrez/DTDs/isogrk4.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,581 root INFO copying Bio/Entrez/DTDs/isolat1.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,582 root INFO copying Bio/Entrez/DTDs/isolat2.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,582 root INFO copying Bio/Entrez/DTDs/isomfrk.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,582 root INFO copying Bio/Entrez/DTDs/isomopf.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,582 root INFO copying Bio/Entrez/DTDs/isomscr.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,583 root INFO copying Bio/Entrez/DTDs/isonum.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,583 root INFO copying Bio/Entrez/DTDs/isopub.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,583 root INFO copying Bio/Entrez/DTDs/isotech.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,583 root INFO copying Bio/Entrez/DTDs/journalmeta.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,584 root INFO copying Bio/Entrez/DTDs/link.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,584 root INFO copying Bio/Entrez/DTDs/list.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,584 root INFO copying Bio/Entrez/DTDs/math.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,585 root INFO copying Bio/Entrez/DTDs/mathml-in-pubmed.mod -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,585 root INFO copying Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,585 root INFO copying Bio/Entrez/DTDs/mathml2.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,585 root INFO copying Bio/Entrez/DTDs/mathml3-qname1.mod -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,586 root INFO copying Bio/Entrez/DTDs/mathml3.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,586 root INFO copying Bio/Entrez/DTDs/mathmlsetup.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,586 root INFO copying Bio/Entrez/DTDs/mmlalias.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,587 root INFO copying Bio/Entrez/DTDs/mmlextra.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,587 root INFO copying Bio/Entrez/DTDs/modules.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,587 root INFO copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,587 root INFO copying Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,588 root INFO copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,588 root INFO copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,588 root INFO copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,588 root INFO copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,589 root INFO copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,589 root INFO copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,589 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,589 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,590 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,590 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,590 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,590 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,591 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,591 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,591 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,591 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,592 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,592 root INFO copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,592 root INFO copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,593 root INFO copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,593 root INFO copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,593 root INFO copying Bio/Entrez/DTDs/notat.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,593 root INFO copying Bio/Entrez/DTDs/para.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,594 root INFO copying Bio/Entrez/DTDs/phrase.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,594 root INFO copying Bio/Entrez/DTDs/pmc-1.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,594 root INFO copying Bio/Entrez/DTDs/pubmed_020114.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,594 root INFO copying Bio/Entrez/DTDs/pubmed_080101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,595 root INFO copying Bio/Entrez/DTDs/pubmed_090101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,595 root INFO copying Bio/Entrez/DTDs/pubmed_100101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,595 root INFO copying Bio/Entrez/DTDs/pubmed_100301.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,595 root INFO copying Bio/Entrez/DTDs/pubmed_110101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,596 root INFO copying Bio/Entrez/DTDs/pubmed_120101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,596 root INFO copying Bio/Entrez/DTDs/pubmed_130101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,596 root INFO copying Bio/Entrez/DTDs/pubmed_130501.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,596 root INFO copying Bio/Entrez/DTDs/pubmed_140101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,597 root INFO copying Bio/Entrez/DTDs/pubmed_150101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,597 root INFO copying Bio/Entrez/DTDs/pubmed_180101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,597 root INFO copying Bio/Entrez/DTDs/pubmed_180601.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,597 root INFO copying Bio/Entrez/DTDs/pubmed_190101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,598 root INFO copying Bio/Entrez/DTDs/pubmed_230101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,598 root INFO copying Bio/Entrez/DTDs/pubmed_240101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,598 root INFO copying Bio/Entrez/DTDs/pubmed_250101.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,598 root INFO copying Bio/Entrez/DTDs/references.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,599 root INFO copying Bio/Entrez/DTDs/section.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,599 root INFO copying Bio/Entrez/DTDs/taxon.dtd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,599 root INFO copying Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,599 root INFO copying Bio/Entrez/DTDs/xhtml-table-1.mod -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,600 root INFO copying Bio/Entrez/DTDs/xmlspecchars.ent -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs
2026-05-11 01:56:48,600 root INFO creating build/lib.linux-armv8l-cpython-314/Bio/Entrez/XSDs
2026-05-11 01:56:48,600 root INFO copying Bio/Entrez/XSDs/IPGReportSet.xsd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/XSDs
2026-05-11 01:56:48,600 root INFO copying Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/XSDs
2026-05-11 01:56:48,601 root INFO copying Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> build/lib.linux-armv8l-cpython-314/Bio/Entrez/XSDs
2026-05-11 01:56:48,601 root INFO copying Bio/motifs/_pwm.c -> build/lib.linux-armv8l-cpython-314/Bio/motifs
2026-05-11 01:56:48,601 root INFO copying Bio/Nexus/cnexus.c -> build/lib.linux-armv8l-cpython-314/Bio/Nexus
2026-05-11 01:56:48,601 root INFO copying Bio/PDB/bcifhelpermodule.c -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,602 root INFO copying Bio/PDB/ccealignmodule.c -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,602 root INFO copying Bio/PDB/kdtrees.c -> build/lib.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:56:48,602 root INFO copying Bio/SeqIO/_twoBitIO.c -> build/lib.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:56:48,602 root INFO copying BioSQL/py.typed -> build/lib.linux-armv8l-cpython-314/BioSQL
2026-05-11 01:56:48,607 root INFO running build_ext
2026-05-11 01:56:48,609 root INFO building 'Bio.Align._aligncore' extension
2026-05-11 01:56:48,609 root INFO creating build/temp.linux-armv8l-cpython-314/Bio/Align
2026-05-11 01:56:48,610 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align/_aligncore.c -o build/temp.linux-armv8l-cpython-314/Bio/Align/_aligncore.o
2026-05-11 01:56:48,861 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-314/Bio/Align/_aligncore.o -L/usr/lib -o build/lib.linux-armv8l-cpython-314/Bio/Align/_aligncore.cpython-314-arm-linux-musleabihf.so
2026-05-11 01:56:48,870 root INFO building 'Bio.Align._alignmentcounts' extension
2026-05-11 01:56:48,871 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align/_alignmentcounts.c -o build/temp.linux-armv8l-cpython-314/Bio/Align/_alignmentcounts.o
2026-05-11 01:56:49,587 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-314/Bio/Align/_alignmentcounts.o -L/usr/lib -o build/lib.linux-armv8l-cpython-314/Bio/Align/_alignmentcounts.cpython-314-arm-linux-musleabihf.so
2026-05-11 01:56:49,598 root INFO building 'Bio.Align._codonaligner' extension
2026-05-11 01:56:49,598 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align/_codonaligner.c -o build/temp.linux-armv8l-cpython-314/Bio/Align/_codonaligner.o
2026-05-11 01:56:50,112 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-314/Bio/Align/_codonaligner.o -L/usr/lib -o build/lib.linux-armv8l-cpython-314/Bio/Align/_codonaligner.cpython-314-arm-linux-musleabihf.so
2026-05-11 01:56:50,123 root INFO building 'Bio.Align._pairwisealigner' extension
2026-05-11 01:56:50,123 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align/_pairwisealigner.c -o build/temp.linux-armv8l-cpython-314/Bio/Align/_pairwisealigner.o
2026-05-11 01:56:57,125 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-314/Bio/Align/_pairwisealigner.o -L/usr/lib -o build/lib.linux-armv8l-cpython-314/Bio/Align/_pairwisealigner.cpython-314-arm-linux-musleabihf.so
2026-05-11 01:56:57,138 root INFO building 'Bio.Align.substitution_matrices._arraycore' extension
2026-05-11 01:56:57,138 root INFO creating build/temp.linux-armv8l-cpython-314/Bio/Align/substitution_matrices
2026-05-11 01:56:57,138 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align/substitution_matrices/_arraycore.c -o build/temp.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/_arraycore.o
2026-05-11 01:56:57,350 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/_arraycore.o -L/usr/lib -o build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/_arraycore.cpython-314-arm-linux-musleabihf.so
2026-05-11 01:56:57,361 root INFO building 'Bio.cpairwise2' extension
2026-05-11 01:56:57,361 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/cpairwise2module.c -o build/temp.linux-armv8l-cpython-314/Bio/cpairwise2module.o
2026-05-11 01:56:57,690 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-314/Bio/cpairwise2module.o -L/usr/lib -o build/lib.linux-armv8l-cpython-314/Bio/cpairwise2.cpython-314-arm-linux-musleabihf.so
2026-05-11 01:56:57,700 root INFO building 'Bio.Nexus.cnexus' extension
2026-05-11 01:56:57,700 root INFO creating build/temp.linux-armv8l-cpython-314/Bio/Nexus
2026-05-11 01:56:57,700 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Nexus/cnexus.c -o build/temp.linux-armv8l-cpython-314/Bio/Nexus/cnexus.o
2026-05-11 01:56:57,845 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-314/Bio/Nexus/cnexus.o -L/usr/lib -o build/lib.linux-armv8l-cpython-314/Bio/Nexus/cnexus.cpython-314-arm-linux-musleabihf.so
2026-05-11 01:56:57,855 root INFO building 'Bio.motifs._pwm' extension
2026-05-11 01:56:57,855 root INFO creating build/temp.linux-armv8l-cpython-314/Bio/motifs
2026-05-11 01:56:57,856 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/motifs/_pwm.c -o build/temp.linux-armv8l-cpython-314/Bio/motifs/_pwm.o
2026-05-11 01:56:58,034 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-314/Bio/motifs/_pwm.o -L/usr/lib -o build/lib.linux-armv8l-cpython-314/Bio/motifs/_pwm.cpython-314-arm-linux-musleabihf.so
2026-05-11 01:56:58,045 root INFO building 'Bio.Cluster._cluster' extension
2026-05-11 01:56:58,045 root INFO creating build/temp.linux-armv8l-cpython-314/Bio/Cluster
2026-05-11 01:56:58,045 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Cluster/cluster.c -o build/temp.linux-armv8l-cpython-314/Bio/Cluster/cluster.o -DCLUSTER_USE_PYTHON_MEMORY
2026-05-11 01:57:00,312 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Cluster/clustermodule.c -o build/temp.linux-armv8l-cpython-314/Bio/Cluster/clustermodule.o -DCLUSTER_USE_PYTHON_MEMORY
2026-05-11 01:57:01,001 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-314/Bio/Cluster/cluster.o build/temp.linux-armv8l-cpython-314/Bio/Cluster/clustermodule.o -L/usr/lib -o build/lib.linux-armv8l-cpython-314/Bio/Cluster/_cluster.cpython-314-arm-linux-musleabihf.so
2026-05-11 01:57:01,012 root INFO building 'Bio.PDB.ccealign' extension
2026-05-11 01:57:01,012 root INFO creating build/temp.linux-armv8l-cpython-314/Bio/PDB
2026-05-11 01:57:01,012 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/PDB/ccealignmodule.c -o build/temp.linux-armv8l-cpython-314/Bio/PDB/ccealignmodule.o
2026-05-11 01:57:01,331 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-314/Bio/PDB/ccealignmodule.o -L/usr/lib -o build/lib.linux-armv8l-cpython-314/Bio/PDB/ccealign.cpython-314-arm-linux-musleabihf.so
2026-05-11 01:57:01,341 root INFO building 'Bio.PDB.kdtrees' extension
2026-05-11 01:57:01,341 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/PDB/kdtrees.c -o build/temp.linux-armv8l-cpython-314/Bio/PDB/kdtrees.o
2026-05-11 01:57:01,759 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-314/Bio/PDB/kdtrees.o -L/usr/lib -o build/lib.linux-armv8l-cpython-314/Bio/PDB/kdtrees.cpython-314-arm-linux-musleabihf.so
2026-05-11 01:57:01,769 root INFO building 'Bio.PDB._bcif_helper' extension
2026-05-11 01:57:01,769 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/PDB/bcifhelpermodule.c -o build/temp.linux-armv8l-cpython-314/Bio/PDB/bcifhelpermodule.o
2026-05-11 01:57:01,922 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-314/Bio/PDB/bcifhelpermodule.o -L/usr/lib -o build/lib.linux-armv8l-cpython-314/Bio/PDB/_bcif_helper.cpython-314-arm-linux-musleabihf.so
2026-05-11 01:57:01,931 root INFO building 'Bio.SeqIO._twoBitIO' extension
2026-05-11 01:57:01,932 root INFO creating build/temp.linux-armv8l-cpython-314/Bio/SeqIO
2026-05-11 01:57:01,932 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/SeqIO/_twoBitIO.c -o build/temp.linux-armv8l-cpython-314/Bio/SeqIO/_twoBitIO.o
2026-05-11 01:57:02,124 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-314/Bio/SeqIO/_twoBitIO.o -L/usr/lib -o build/lib.linux-armv8l-cpython-314/Bio/SeqIO/_twoBitIO.cpython-314-arm-linux-musleabihf.so
2026-05-11 01:57:02,137 root INFO installing to build/bdist.linux-armv8l/wheel
2026-05-11 01:57:02,137 root INFO running install
2026-05-11 01:57:02,146 root INFO running install_lib
2026-05-11 01:57:02,148 root INFO creating build/bdist.linux-armv8l/wheel
2026-05-11 01:57:02,148 root INFO creating build/bdist.linux-armv8l/wheel/BioSQL
2026-05-11 01:57:02,148 root INFO copying build/lib.linux-armv8l-cpython-314/BioSQL/__init__.py -> build/bdist.linux-armv8l/wheel/./BioSQL
2026-05-11 01:57:02,148 root INFO copying build/lib.linux-armv8l-cpython-314/BioSQL/BioSeqDatabase.py -> build/bdist.linux-armv8l/wheel/./BioSQL
2026-05-11 01:57:02,149 root INFO copying build/lib.linux-armv8l-cpython-314/BioSQL/py.typed -> build/bdist.linux-armv8l/wheel/./BioSQL
2026-05-11 01:57:02,149 root INFO copying build/lib.linux-armv8l-cpython-314/BioSQL/Loader.py -> build/bdist.linux-armv8l/wheel/./BioSQL
2026-05-11 01:57:02,149 root INFO copying build/lib.linux-armv8l-cpython-314/BioSQL/BioSeq.py -> build/bdist.linux-armv8l/wheel/./BioSQL
2026-05-11 01:57:02,149 root INFO copying build/lib.linux-armv8l-cpython-314/BioSQL/DBUtils.py -> build/bdist.linux-armv8l/wheel/./BioSQL
2026-05-11 01:57:02,150 root INFO creating build/bdist.linux-armv8l/wheel/Bio
2026-05-11 01:57:02,150 root INFO creating build/bdist.linux-armv8l/wheel/Bio/HMM
2026-05-11 01:57:02,150 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/HMM/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/HMM
2026-05-11 01:57:02,150 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio
2026-05-11 01:57:02,150 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Phylo
2026-05-11 01:57:02,151 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2026-05-11 01:57:02,151 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/_cdao_owl.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2026-05-11 01:57:02,151 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/TreeConstruction.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2026-05-11 01:57:02,151 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/Newick.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2026-05-11 01:57:02,152 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/Consensus.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2026-05-11 01:57:02,152 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/NeXML.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2026-05-11 01:57:02,152 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/PhyloXMLIO.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2026-05-11 01:57:02,152 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/BaseTree.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2026-05-11 01:57:02,153 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/_utils.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2026-05-11 01:57:02,153 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/_io.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2026-05-11 01:57:02,153 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/NewickIO.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2026-05-11 01:57:02,153 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/CDAOIO.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2026-05-11 01:57:02,153 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/NeXMLIO.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2026-05-11 01:57:02,154 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/CDAO.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2026-05-11 01:57:02,154 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Phylo/PAML
2026-05-11 01:57:02,154 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/PAML
2026-05-11 01:57:02,154 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML/codeml.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/PAML
2026-05-11 01:57:02,154 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML/baseml.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/PAML
2026-05-11 01:57:02,155 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML/_parse_codeml.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/PAML
2026-05-11 01:57:02,155 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML/_parse_yn00.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/PAML
2026-05-11 01:57:02,155 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML/_paml.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/PAML
2026-05-11 01:57:02,155 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML/_parse_baseml.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/PAML
2026-05-11 01:57:02,156 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML/yn00.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/PAML
2026-05-11 01:57:02,156 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/PAML/chi2.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/PAML
2026-05-11 01:57:02,156 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/PhyloXML.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2026-05-11 01:57:02,156 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Phylo/NexusIO.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2026-05-11 01:57:02,156 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Restriction
2026-05-11 01:57:02,157 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Restriction/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Restriction
2026-05-11 01:57:02,157 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Restriction/PrintFormat.py -> build/bdist.linux-armv8l/wheel/./Bio/Restriction
2026-05-11 01:57:02,157 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Restriction/Restriction_Dictionary.py -> build/bdist.linux-armv8l/wheel/./Bio/Restriction
2026-05-11 01:57:02,158 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Restriction/Restriction.py -> build/bdist.linux-armv8l/wheel/./Bio/Restriction
2026-05-11 01:57:02,158 root INFO creating build/bdist.linux-armv8l/wheel/Bio/AlignIO
2026-05-11 01:57:02,159 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/AlignIO/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2026-05-11 01:57:02,159 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/AlignIO/Interfaces.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2026-05-11 01:57:02,159 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/AlignIO/ClustalIO.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2026-05-11 01:57:02,159 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/AlignIO/PhylipIO.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2026-05-11 01:57:02,160 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/AlignIO/MsfIO.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2026-05-11 01:57:02,160 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/AlignIO/MauveIO.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2026-05-11 01:57:02,160 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/AlignIO/StockholmIO.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2026-05-11 01:57:02,160 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/AlignIO/EmbossIO.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2026-05-11 01:57:02,161 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/AlignIO/FastaIO.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2026-05-11 01:57:02,161 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/AlignIO/MafIO.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2026-05-11 01:57:02,161 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/AlignIO/NexusIO.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2026-05-11 01:57:02,161 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Compass
2026-05-11 01:57:02,162 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Compass/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Compass
2026-05-11 01:57:02,162 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Nexus
2026-05-11 01:57:02,162 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Nexus/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Nexus
2026-05-11 01:57:02,162 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Nexus/StandardData.py -> build/bdist.linux-armv8l/wheel/./Bio/Nexus
2026-05-11 01:57:02,162 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Nexus/cnexus.c -> build/bdist.linux-armv8l/wheel/./Bio/Nexus
2026-05-11 01:57:02,163 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Nexus/Nexus.py -> build/bdist.linux-armv8l/wheel/./Bio/Nexus
2026-05-11 01:57:02,163 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Nexus/cnexus.cpython-314-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/Nexus
2026-05-11 01:57:02,163 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Nexus/Trees.py -> build/bdist.linux-armv8l/wheel/./Bio/Nexus
2026-05-11 01:57:02,164 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Nexus/Nodes.py -> build/bdist.linux-armv8l/wheel/./Bio/Nexus
2026-05-11 01:57:02,164 root INFO creating build/bdist.linux-armv8l/wheel/Bio/codonalign
2026-05-11 01:57:02,164 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/codonalign/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/codonalign
2026-05-11 01:57:02,164 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/codonalign/codonseq.py -> build/bdist.linux-armv8l/wheel/./Bio/codonalign
2026-05-11 01:57:02,165 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/codonalign/codonalignment.py -> build/bdist.linux-armv8l/wheel/./Bio/codonalign
2026-05-11 01:57:02,165 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Cluster
2026-05-11 01:57:02,165 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Cluster/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Cluster
2026-05-11 01:57:02,165 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Cluster/cluster.h -> build/bdist.linux-armv8l/wheel/./Bio/Cluster
2026-05-11 01:57:02,165 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Cluster/clustermodule.c -> build/bdist.linux-armv8l/wheel/./Bio/Cluster
2026-05-11 01:57:02,166 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Cluster/cluster.c -> build/bdist.linux-armv8l/wheel/./Bio/Cluster
2026-05-11 01:57:02,166 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Cluster/_cluster.cpython-314-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/Cluster
2026-05-11 01:57:02,167 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Graphics
2026-05-11 01:57:02,167 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics
2026-05-11 01:57:02,167 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/BasicChromosome.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics
2026-05-11 01:57:02,167 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/KGML_vis.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics
2026-05-11 01:57:02,168 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/Comparative.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics
2026-05-11 01:57:02,168 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/ColorSpiral.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics
2026-05-11 01:57:02,168 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/DisplayRepresentation.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics
2026-05-11 01:57:02,168 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Graphics/GenomeDiagram
2026-05-11 01:57:02,169 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2026-05-11 01:57:02,169 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2026-05-11 01:57:02,169 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2026-05-11 01:57:02,169 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram/_Diagram.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2026-05-11 01:57:02,169 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2026-05-11 01:57:02,170 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram/_Track.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2026-05-11 01:57:02,170 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram/_Colors.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2026-05-11 01:57:02,170 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram/_Feature.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2026-05-11 01:57:02,170 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2026-05-11 01:57:02,170 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2026-05-11 01:57:02,171 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram/_Graph.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2026-05-11 01:57:02,171 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2026-05-11 01:57:02,171 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Graphics/Distribution.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics
2026-05-11 01:57:02,171 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/File.py -> build/bdist.linux-armv8l/wheel/./Bio
2026-05-11 01:57:02,172 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Sequencing
2026-05-11 01:57:02,172 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Sequencing/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Sequencing
2026-05-11 01:57:02,172 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Sequencing/Ace.py -> build/bdist.linux-armv8l/wheel/./Bio/Sequencing
2026-05-11 01:57:02,172 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Sequencing/Phd.py -> build/bdist.linux-armv8l/wheel/./Bio/Sequencing
2026-05-11 01:57:02,173 root INFO creating build/bdist.linux-armv8l/wheel/Bio/KEGG
2026-05-11 01:57:02,173 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/KEGG/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/KEGG
2026-05-11 01:57:02,173 root INFO creating build/bdist.linux-armv8l/wheel/Bio/KEGG/Gene
2026-05-11 01:57:02,173 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/KEGG/Gene/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/KEGG/Gene
2026-05-11 01:57:02,173 root INFO creating build/bdist.linux-armv8l/wheel/Bio/KEGG/KGML
2026-05-11 01:57:02,174 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/KEGG/KGML/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/KEGG/KGML
2026-05-11 01:57:02,174 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/KEGG/KGML/KGML_pathway.py -> build/bdist.linux-armv8l/wheel/./Bio/KEGG/KGML
2026-05-11 01:57:02,174 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/KEGG/KGML/KGML_parser.py -> build/bdist.linux-armv8l/wheel/./Bio/KEGG/KGML
2026-05-11 01:57:02,174 root INFO creating build/bdist.linux-armv8l/wheel/Bio/KEGG/Map
2026-05-11 01:57:02,175 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/KEGG/Map/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/KEGG/Map
2026-05-11 01:57:02,175 root INFO creating build/bdist.linux-armv8l/wheel/Bio/KEGG/Compound
2026-05-11 01:57:02,175 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/KEGG/Compound/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/KEGG/Compound
2026-05-11 01:57:02,175 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/KEGG/REST.py -> build/bdist.linux-armv8l/wheel/./Bio/KEGG
2026-05-11 01:57:02,175 root INFO creating build/bdist.linux-armv8l/wheel/Bio/KEGG/Enzyme
2026-05-11 01:57:02,176 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/KEGG/Enzyme/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/KEGG/Enzyme
2026-05-11 01:57:02,176 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/cpairwise2module.c -> build/bdist.linux-armv8l/wheel/./Bio
2026-05-11 01:57:02,176 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/bgzf.py -> build/bdist.linux-armv8l/wheel/./Bio
2026-05-11 01:57:02,176 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Pathway
2026-05-11 01:57:02,177 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Pathway/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Pathway
2026-05-11 01:57:02,177 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Pathway/Rep
2026-05-11 01:57:02,177 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Pathway/Rep/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Pathway/Rep
2026-05-11 01:57:02,177 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Pathway/Rep/Graph.py -> build/bdist.linux-armv8l/wheel/./Bio/Pathway/Rep
2026-05-11 01:57:02,177 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Pathway/Rep/MultiGraph.py -> build/bdist.linux-armv8l/wheel/./Bio/Pathway/Rep
2026-05-11 01:57:02,178 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SCOP
2026-05-11 01:57:02,178 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SCOP/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SCOP
2026-05-11 01:57:02,178 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SCOP/Hie.py -> build/bdist.linux-armv8l/wheel/./Bio/SCOP
2026-05-11 01:57:02,178 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SCOP/Raf.py -> build/bdist.linux-armv8l/wheel/./Bio/SCOP
2026-05-11 01:57:02,179 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SCOP/Dom.py -> build/bdist.linux-armv8l/wheel/./Bio/SCOP
2026-05-11 01:57:02,179 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SCOP/Cla.py -> build/bdist.linux-armv8l/wheel/./Bio/SCOP
2026-05-11 01:57:02,179 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SCOP/Des.py -> build/bdist.linux-armv8l/wheel/./Bio/SCOP
2026-05-11 01:57:02,179 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SCOP/Residues.py -> build/bdist.linux-armv8l/wheel/./Bio/SCOP
2026-05-11 01:57:02,179 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Seq.py -> build/bdist.linux-armv8l/wheel/./Bio
2026-05-11 01:57:02,180 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Data
2026-05-11 01:57:02,180 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Data/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Data
2026-05-11 01:57:02,180 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Data/IUPACData.py -> build/bdist.linux-armv8l/wheel/./Bio/Data
2026-05-11 01:57:02,180 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Data/CodonTable.py -> build/bdist.linux-armv8l/wheel/./Bio/Data
2026-05-11 01:57:02,181 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Data/PDBData.py -> build/bdist.linux-armv8l/wheel/./Bio/Data
2026-05-11 01:57:02,181 root INFO creating build/bdist.linux-armv8l/wheel/Bio/TogoWS
2026-05-11 01:57:02,181 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/TogoWS/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/TogoWS
2026-05-11 01:57:02,181 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Medline
2026-05-11 01:57:02,182 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Medline/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Medline
2026-05-11 01:57:02,182 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Blast
2026-05-11 01:57:02,182 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Blast/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Blast
2026-05-11 01:57:02,182 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Blast/_writers.py -> build/bdist.linux-armv8l/wheel/./Bio/Blast
2026-05-11 01:57:02,183 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Blast/NCBIWWW.py -> build/bdist.linux-armv8l/wheel/./Bio/Blast
2026-05-11 01:57:02,183 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Blast/_parser.py -> build/bdist.linux-armv8l/wheel/./Bio/Blast
2026-05-11 01:57:02,183 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Blast/NCBIXML.py -> build/bdist.linux-armv8l/wheel/./Bio/Blast
2026-05-11 01:57:02,183 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/_utils.py -> build/bdist.linux-armv8l/wheel/./Bio
2026-05-11 01:57:02,184 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/cpairwise2.cpython-314-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio
2026-05-11 01:57:02,184 root INFO creating build/bdist.linux-armv8l/wheel/Bio/PopGen
2026-05-11 01:57:02,184 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PopGen/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/PopGen
2026-05-11 01:57:02,184 root INFO creating build/bdist.linux-armv8l/wheel/Bio/PopGen/GenePop
2026-05-11 01:57:02,184 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PopGen/GenePop/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/PopGen/GenePop
2026-05-11 01:57:02,185 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PopGen/GenePop/LargeFileParser.py -> build/bdist.linux-armv8l/wheel/./Bio/PopGen/GenePop
2026-05-11 01:57:02,185 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PopGen/GenePop/FileParser.py -> build/bdist.linux-armv8l/wheel/./Bio/PopGen/GenePop
2026-05-11 01:57:02,185 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Emboss
2026-05-11 01:57:02,185 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Emboss/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Emboss
2026-05-11 01:57:02,185 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Emboss/Primer3.py -> build/bdist.linux-armv8l/wheel/./Bio/Emboss
2026-05-11 01:57:02,186 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Emboss/PrimerSearch.py -> build/bdist.linux-armv8l/wheel/./Bio/Emboss
2026-05-11 01:57:02,186 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SwissProt
2026-05-11 01:57:02,186 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SwissProt/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SwissProt
2026-05-11 01:57:02,186 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SwissProt/KeyWList.py -> build/bdist.linux-armv8l/wheel/./Bio/SwissProt
2026-05-11 01:57:02,187 root INFO creating build/bdist.linux-armv8l/wheel/Bio/UniProt
2026-05-11 01:57:02,187 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/UniProt/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/UniProt
2026-05-11 01:57:02,187 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/UniProt/GOA.py -> build/bdist.linux-armv8l/wheel/./Bio/UniProt
2026-05-11 01:57:02,187 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SearchIO
2026-05-11 01:57:02,187 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO
2026-05-11 01:57:02,188 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SearchIO/HHsuiteIO
2026-05-11 01:57:02,188 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/HHsuiteIO/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/HHsuiteIO
2026-05-11 01:57:02,188 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/HHsuiteIO
2026-05-11 01:57:02,188 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/_index.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO
2026-05-11 01:57:02,188 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SearchIO/BlastIO
2026-05-11 01:57:02,189 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/BlastIO/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/BlastIO
2026-05-11 01:57:02,189 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/BlastIO/blast_xml.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/BlastIO
2026-05-11 01:57:02,189 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/BlastIO/blast_tab.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/BlastIO
2026-05-11 01:57:02,189 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SearchIO/_model
2026-05-11 01:57:02,189 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/_model/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/_model
2026-05-11 01:57:02,190 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/_model/query.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/_model
2026-05-11 01:57:02,190 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/_model/hit.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/_model
2026-05-11 01:57:02,190 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/_model/hsp.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/_model
2026-05-11 01:57:02,190 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/_model/_base.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/_model
2026-05-11 01:57:02,191 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SearchIO/ExonerateIO
2026-05-11 01:57:02,191 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/ExonerateIO/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/ExonerateIO
2026-05-11 01:57:02,191 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/ExonerateIO
2026-05-11 01:57:02,191 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/ExonerateIO
2026-05-11 01:57:02,191 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/ExonerateIO/_base.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/ExonerateIO
2026-05-11 01:57:02,192 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/ExonerateIO
2026-05-11 01:57:02,192 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SearchIO/HmmerIO
2026-05-11 01:57:02,192 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/HmmerIO/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/HmmerIO
2026-05-11 01:57:02,192 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/HmmerIO
2026-05-11 01:57:02,193 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/HmmerIO
2026-05-11 01:57:02,193 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/HmmerIO
2026-05-11 01:57:02,193 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/HmmerIO/_base.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/HmmerIO
2026-05-11 01:57:02,193 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/HmmerIO
2026-05-11 01:57:02,193 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/_utils.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO
2026-05-11 01:57:02,194 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SearchIO/InterproscanIO
2026-05-11 01:57:02,194 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/InterproscanIO/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/InterproscanIO
2026-05-11 01:57:02,194 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/InterproscanIO
2026-05-11 01:57:02,194 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/FastaIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO
2026-05-11 01:57:02,194 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/BlatIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO
2026-05-11 01:57:02,195 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SearchIO/InfernalIO
2026-05-11 01:57:02,195 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/InfernalIO/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/InfernalIO
2026-05-11 01:57:02,195 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/InfernalIO/infernal_tab.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/InfernalIO
2026-05-11 01:57:02,195 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/InfernalIO/infernal_text.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/InfernalIO
2026-05-11 01:57:02,196 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SearchIO/InfernalIO/_base.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/InfernalIO
2026-05-11 01:57:02,196 root INFO creating build/bdist.linux-armv8l/wheel/Bio/CAPS
2026-05-11 01:57:02,196 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/CAPS/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/CAPS
2026-05-11 01:57:02,196 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Affy
2026-05-11 01:57:02,196 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Affy/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Affy
2026-05-11 01:57:02,197 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Affy/CelFile.py -> build/bdist.linux-armv8l/wheel/./Bio/Affy
2026-05-11 01:57:02,197 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SVDSuperimposer
2026-05-11 01:57:02,197 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SVDSuperimposer/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SVDSuperimposer
2026-05-11 01:57:02,197 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SeqUtils
2026-05-11 01:57:02,197 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqUtils/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqUtils
2026-05-11 01:57:02,198 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqUtils/ProtParam.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqUtils
2026-05-11 01:57:02,198 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqUtils/CheckSum.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqUtils
2026-05-11 01:57:02,198 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqUtils/lcc.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqUtils
2026-05-11 01:57:02,198 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqUtils/MeltingTemp.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqUtils
2026-05-11 01:57:02,198 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqUtils/ProtParamData.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqUtils
2026-05-11 01:57:02,199 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqUtils/IsoelectricPoint.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqUtils
2026-05-11 01:57:02,199 root INFO creating build/bdist.linux-armv8l/wheel/Bio/motifs
2026-05-11 01:57:02,199 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/motifs/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2026-05-11 01:57:02,199 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/motifs/transfac.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2026-05-11 01:57:02,200 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/motifs/alignace.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2026-05-11 01:57:02,200 root INFO creating build/bdist.linux-armv8l/wheel/Bio/motifs/jaspar
2026-05-11 01:57:02,200 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/motifs/jaspar/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs/jaspar
2026-05-11 01:57:02,200 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/motifs/jaspar/db.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs/jaspar
2026-05-11 01:57:02,200 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/motifs/minimal.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2026-05-11 01:57:02,201 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/motifs/pfm.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2026-05-11 01:57:02,201 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/motifs/_pwm.cpython-314-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2026-05-11 01:57:02,201 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/motifs/xms.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2026-05-11 01:57:02,201 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/motifs/meme.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2026-05-11 01:57:02,201 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/motifs/mast.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2026-05-11 01:57:02,202 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/motifs/clusterbuster.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2026-05-11 01:57:02,202 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/motifs/matrix.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2026-05-11 01:57:02,202 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/motifs/_pwm.c -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2026-05-11 01:57:02,202 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/motifs/thresholds.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2026-05-11 01:57:02,202 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqRecord.py -> build/bdist.linux-armv8l/wheel/./Bio
2026-05-11 01:57:02,203 root INFO creating build/bdist.linux-armv8l/wheel/Bio/phenotype
2026-05-11 01:57:02,203 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/phenotype/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/phenotype
2026-05-11 01:57:02,203 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/phenotype/phen_micro.py -> build/bdist.linux-armv8l/wheel/./Bio/phenotype
2026-05-11 01:57:02,204 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/phenotype/pm_fitting.py -> build/bdist.linux-armv8l/wheel/./Bio/phenotype
2026-05-11 01:57:02,204 root INFO creating build/bdist.linux-armv8l/wheel/Bio/NMR
2026-05-11 01:57:02,204 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/NMR/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/NMR
2026-05-11 01:57:02,204 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/NMR/xpktools.py -> build/bdist.linux-armv8l/wheel/./Bio/NMR
2026-05-11 01:57:02,204 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/NMR/NOEtools.py -> build/bdist.linux-armv8l/wheel/./Bio/NMR
2026-05-11 01:57:02,205 root INFO creating build/bdist.linux-armv8l/wheel/Bio/PDB
2026-05-11 01:57:02,205 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,205 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/ic_rebuild.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,205 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/MMCIFParser.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,205 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/qcprot.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,206 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/Entity.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,206 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/DSSP.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,206 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/mmcifio.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,206 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/Dice.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,206 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/PDBIO.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,207 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/StructureAlignment.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,207 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/ccealign.cpython-314-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,207 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/cealign.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,207 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/SCADIO.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,207 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/ic_data.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,208 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/PDBList.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,208 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/binary_cif.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,208 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/NeighborSearch.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,208 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/PDBMLParser.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,209 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/vectors.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,209 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/StructureBuilder.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,209 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/SASA.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,209 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/kdtrees.cpython-314-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,209 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/MMCIF2Dict.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,210 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/internal_coords.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,210 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/PDBParser.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,210 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/ccealignmodule.c -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,211 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/Structure.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,211 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/Selection.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,211 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/kdtrees.c -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,211 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/PSEA.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,212 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/alphafold_db.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,212 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/Model.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,212 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/PDBExceptions.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,212 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/Polypeptide.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,212 root INFO creating build/bdist.linux-armv8l/wheel/Bio/PDB/mmtf
2026-05-11 01:57:02,212 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/mmtf/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB/mmtf
2026-05-11 01:57:02,213 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/mmtf/mmtfio.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB/mmtf
2026-05-11 01:57:02,213 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/mmtf/DefaultParser.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB/mmtf
2026-05-11 01:57:02,213 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/bcifhelpermodule.c -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,213 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/AbstractPropertyMap.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,213 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/Atom.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,214 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/_bcif_helper.cpython-314-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,214 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/NACCESS.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,214 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/ResidueDepth.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,214 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/parse_pdb_header.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,215 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/PICIO.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,215 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/Superimposer.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,215 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/FragmentMapper.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,215 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/Chain.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,215 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/Residue.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,216 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/PDB/HSExposure.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2026-05-11 01:57:02,216 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqFeature.py -> build/bdist.linux-armv8l/wheel/./Bio
2026-05-11 01:57:02,216 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Entrez
2026-05-11 01:57:02,216 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Entrez
2026-05-11 01:57:02,217 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Entrez/XSDs
2026-05-11 01:57:02,217 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/XSDs
2026-05-11 01:57:02,217 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/XSDs/IPGReportSet.xsd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/XSDs
2026-05-11 01:57:02,217 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/XSDs
2026-05-11 01:57:02,217 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/Parser.py -> build/bdist.linux-armv8l/wheel/./Bio/Entrez
2026-05-11 01:57:02,218 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Entrez/DTDs
2026-05-11 01:57:02,218 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,218 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,218 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/SP_General.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,219 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,219 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,219 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,219 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,219 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,220 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,220 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,220 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/backmatter.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,220 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,221 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-display1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,221 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,221 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,221 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/pubmed_250101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,221 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/BITS-embedded-index2.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,222 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/OMSSA.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,222 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,222 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,222 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,223 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,223 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_RNA.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,223 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/Docsum_3_3.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,223 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NSE.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,223 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Project.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,223 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,224 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,224 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,224 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,224 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Gene.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,225 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,225 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/egquery.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,225 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_all.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,225 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/chars.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,225 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/elink_020122.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,226 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Sequence.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,226 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/htmltable.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,226 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,226 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/esearch.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,226 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/archivecustom-modules.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,227 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,227 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-link1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,227 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,227 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/SP_General.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,228 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,228 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,228 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,228 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,228 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/MMDB.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,228 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,229 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,229 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/pubmed_090101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,229 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,229 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,229 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/pubmed_110101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,230 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/MMDB_Features.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,230 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,230 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/PRF_General.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,230 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,230 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/mathml3-qname1.mod -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,231 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,231 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/GenBank_General.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,231 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/PDB_General.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,231 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-format1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,232 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Systems.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,232 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/mmlextra.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,232 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isoamsn.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,232 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/eInfo_020511.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,232 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,232 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isoamsa.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,233 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,233 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,233 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Protein.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,233 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Pub.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,234 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-common1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,234 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/archivearticle.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,234 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,235 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/esummary-v1.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,235 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isogrk1.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,235 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,235 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/mmlalias.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,235 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/pubmed_180101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,236 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,236 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,236 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,236 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-notat1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,237 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,237 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,237 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isopub.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,237 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Access.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,237 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,238 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,238 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,238 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,238 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,238 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Medlars.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,239 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,239 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Medline.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,239 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/default-classes.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,239 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,240 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,240 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,240 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/phrase.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,240 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,240 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,240 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isomscr.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,241 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,241 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/eLink_090910.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,241 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,241 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/pubmed_130101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,241 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Organism.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,242 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/OMSSA.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,242 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/pubmed_080101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,242 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isoamsb.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,242 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,242 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/Docsum_3_0.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,243 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/journalmeta.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,243 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isoamso.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,243 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/esummary_clinvar.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,243 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,243 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,244 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-math1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,244 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,244 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/EMBL_General.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,244 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,244 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/references.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,245 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,245 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/modules.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,245 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isonum.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,246 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Submit.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,246 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,246 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/archivecustom-classes.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,246 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/pmc-1.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,246 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isogrk4.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,247 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,247 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,247 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-references1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,247 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/pubmed_240101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,248 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isocyr1.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,248 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,248 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,248 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-related-object1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,248 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,249 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,249 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isocyr2.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,249 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,249 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/MMDB.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,249 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,250 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/xmlspecchars.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,250 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-modules1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,250 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/pubmed_120101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,250 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/common.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,251 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isoamsr.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,251 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,251 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,252 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/list.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,252 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,252 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,252 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,252 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,253 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,253 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,253 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,253 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,253 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/mathml3.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,254 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-funding1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,254 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,254 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,254 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,255 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,255 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,255 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/einfo.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,255 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/pubmed_230101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,255 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,256 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,256 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Blast4.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,256 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,256 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,256 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_General.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,257 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,257 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/default-mixes.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,257 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,257 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/mathml2.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,258 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,258 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/section.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,258 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/pubmed_130501.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,258 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/bookdoc_140101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,258 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,259 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/pubmed_020114.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,259 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,259 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,259 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Mime.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,260 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,260 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,260 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/mathml-in-pubmed.mod -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,260 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/pubmed_180601.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,260 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/elink.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,261 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/taxon.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,261 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/link.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,261 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,261 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,261 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,262 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,262 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Seqres.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,262 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/xhtml-table-1.mod -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,262 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,262 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isodia.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,263 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isomopf.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,263 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Remap.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,263 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,263 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,263 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,264 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,264 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/Docsum_3_1.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,264 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isotech.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,264 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isolat1.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,265 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,265 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,265 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/para.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,265 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/eLink_101123.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,265 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/bookdoc_130101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,266 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,266 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/bookdoc_150101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,266 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/Docsum_3_4.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,266 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,266 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,267 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,267 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/pubmed_150101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,267 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,267 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,268 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,268 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isomfrk.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,268 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,268 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/eSpell.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,268 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/eSearch_020511.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,269 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,269 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/HomoloGene.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,269 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/articlemeta.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,269 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/ePost_020511.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,270 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,270 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/pubmed_140101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,270 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,270 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/math.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,270 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,271 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,271 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-para1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,271 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,271 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,271 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-section1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,272 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isogrk2.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,272 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/display.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,272 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/archivecustom-models.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,273 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NSE.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,273 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/pubmed_190101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,273 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/PIR_General.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,273 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,273 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/bookdoc_110101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,274 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-list1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,274 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Variation.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,274 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isoamsc.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,274 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Biblio.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,274 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,275 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,275 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,275 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,275 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,275 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/esummary_gene.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,276 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/pubmed_100101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,276 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/Docsum_3_2.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,276 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-chars1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,276 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/eSummary_041029.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,276 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,277 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/notat.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,277 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,277 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,277 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,277 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/mathmlsetup.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,278 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/JATS-phrase1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,278 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,278 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/BITS-question-answer2.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,278 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/pubmed_100301.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,279 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isolat2.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,279 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/epost.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,279 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isogrk3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,279 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,279 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/format.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,280 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,280 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/isobox.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,280 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,280 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2026-05-11 01:57:02,280 root INFO creating build/bdist.linux-armv8l/wheel/Bio/GenBank
2026-05-11 01:57:02,281 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/GenBank/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/GenBank
2026-05-11 01:57:02,281 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/GenBank/Record.py -> build/bdist.linux-armv8l/wheel/./Bio/GenBank
2026-05-11 01:57:02,281 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/GenBank/utils.py -> build/bdist.linux-armv8l/wheel/./Bio/GenBank
2026-05-11 01:57:02,281 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/GenBank/Scanner.py -> build/bdist.linux-armv8l/wheel/./Bio/GenBank
2026-05-11 01:57:02,282 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/py.typed -> build/bdist.linux-armv8l/wheel/./Bio
2026-05-11 01:57:02,282 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SeqIO
2026-05-11 01:57:02,282 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,282 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/QualityIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,283 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/PhdIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,283 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/SffIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,283 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/_index.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,283 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/Interfaces.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,284 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/PirIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,284 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/_twoBitIO.c -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,284 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/SwissIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,284 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/InsdcIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,284 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/_twoBitIO.cpython-314-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,285 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/GfaIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,285 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/IgIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,285 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/XdnaIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,285 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/AceIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,285 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/AbiIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,286 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/PdbIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,286 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/UniprotIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,286 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/SnapGeneIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,286 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/TwoBitIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,287 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/SeqXmlIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,287 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/NibIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,287 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/FastaIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,287 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/GckIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,288 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/SeqIO/TabIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2026-05-11 01:57:02,288 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Geo
2026-05-11 01:57:02,288 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Geo/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Geo
2026-05-11 01:57:02,288 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Geo/Record.py -> build/bdist.linux-armv8l/wheel/./Bio/Geo
2026-05-11 01:57:02,288 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Alphabet
2026-05-11 01:57:02,288 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Alphabet/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Alphabet
2026-05-11 01:57:02,289 root INFO creating build/bdist.linux-armv8l/wheel/Bio/UniGene
2026-05-11 01:57:02,289 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/UniGene/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/UniGene
2026-05-11 01:57:02,289 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Align
2026-05-11 01:57:02,289 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,290 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/emboss.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,290 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/a2m.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,290 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/_pairwisealigner.h -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,290 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/_pairwisealigner.cpython-314-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,291 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/chain.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,291 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/bed.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,291 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/_pairwisealigner.c -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,292 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/psl.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,292 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/clustal.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,292 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/msf.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,293 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/tabular.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,293 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/bigpsl.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,293 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/_codonaligner.c -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,293 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/phylip.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,294 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/exonerate.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,294 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/_alignmentcounts.c -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,294 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/fasta.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,294 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/sam.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,295 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Align/substitution_matrices
2026-05-11 01:57:02,295 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices
2026-05-11 01:57:02,295 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,295 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/MEGABLAST -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,295 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM90 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,296 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/HOXD70 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,296 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/PAM70 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,296 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/RAO -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,296 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/PAM30 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,296 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/BENNER22 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,297 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/MCLACHLAN -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,297 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/PAM250 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,297 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/NUC.4.4 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,297 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/BENNER74 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,297 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/JONES -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,297 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM50 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,298 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/BLASTN -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,298 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/LEVIN -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,298 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM80 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,298 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/DAYHOFF -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,298 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/JOHNSON -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,299 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/STR -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,299 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/FENG -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,299 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/MDM78 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,299 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/RISLER -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,299 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/SCHNEIDER -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,300 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/TRANS -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,300 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/GONNET1992 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,300 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM62 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,300 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/BLASTP -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,300 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM45 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,301 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/BENNER6 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,301 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/data/GENETIC -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2026-05-11 01:57:02,301 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/_arraycore.cpython-314-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices
2026-05-11 01:57:02,301 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/_arraycore.h -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices
2026-05-11 01:57:02,301 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/substitution_matrices/_arraycore.c -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices
2026-05-11 01:57:02,302 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/AlignInfo.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,302 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/stockholm.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,302 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/maf.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,302 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/mauve.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,302 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/nexus.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,303 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/bigmaf.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,303 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/hhr.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,303 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/interfaces.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,303 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/_alignmentcounts.cpython-314-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,304 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/analysis.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,304 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/_aligncore.c -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,304 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/bigbed.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,304 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/_codonaligner.cpython-314-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,305 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/Align/_aligncore.cpython-314-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/Align
2026-05-11 01:57:02,305 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/pairwise2.py -> build/bdist.linux-armv8l/wheel/./Bio
2026-05-11 01:57:02,305 root INFO creating build/bdist.linux-armv8l/wheel/Bio/ExPASy
2026-05-11 01:57:02,305 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/ExPASy/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/ExPASy
2026-05-11 01:57:02,306 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/ExPASy/Prosite.py -> build/bdist.linux-armv8l/wheel/./Bio/ExPASy
2026-05-11 01:57:02,306 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/ExPASy/ScanProsite.py -> build/bdist.linux-armv8l/wheel/./Bio/ExPASy
2026-05-11 01:57:02,306 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/ExPASy/Prodoc.py -> build/bdist.linux-armv8l/wheel/./Bio/ExPASy
2026-05-11 01:57:02,306 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/ExPASy/Enzyme.py -> build/bdist.linux-armv8l/wheel/./Bio/ExPASy
2026-05-11 01:57:02,306 root INFO copying build/lib.linux-armv8l-cpython-314/Bio/ExPASy/cellosaurus.py -> build/bdist.linux-armv8l/wheel/./Bio/ExPASy
2026-05-11 01:57:02,307 root INFO running install_egg_info
2026-05-11 01:57:02,309 root INFO Copying biopython.egg-info to build/bdist.linux-armv8l/wheel/./biopython-1.87-py3.14.egg-info
2026-05-11 01:57:02,310 root INFO running install_scripts
2026-05-11 01:57:02,316 root INFO creating build/bdist.linux-armv8l/wheel/biopython-1.87.dist-info/WHEEL
2026-05-11 01:57:02,316 wheel INFO creating '/home/buildozer/aports/community/py3-biopython/src/biopython-1.87/.dist/.tmp-kq8ci5v_/biopython-1.87-cp314-cp314-linux_armv8l.whl' and adding 'build/bdist.linux-armv8l/wheel' to it
2026-05-11 01:57:02,317 wheel INFO adding 'Bio/File.py'
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2026-05-11 01:57:02,323 wheel INFO adding 'Bio/Align/__init__.py'
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2026-05-11 01:57:02,329 wheel INFO adding 'Bio/Align/_pairwisealigner.h'
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<string>:18: DeprecationWarning: Invoking setup.py is deprecated and will be removed in a future release of Biopython.
Please use `pip install` or `python -m build` instead of `python setup.py` commands.
For further information see https://packaging.python.org/en/latest/discussions/setup-py-deprecated/

DEPRECATION WARNING: Invoking setup.py is deprecated and will be removed in a future release of Biopython.
Please use `pip install` or `python -m build` instead of `python setup.py` commands.
For further information see https://packaging.python.org/en/latest/discussions/setup-py-deprecated/

2026-05-11 01:57:02,517 gpep517 INFO The backend produced .dist/biopython-1.87-cp314-cp314-linux_armv8l.whl
biopython-1.87-cp314-cp314-linux_armv8l.whl
>>> py3-biopython: Entering fakeroot...
>>> py3-biopython-pyc*: Running split function pyc...
'usr/lib/python3.14/site-packages/BioSQL/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/BioSQL/__pycache__'
'usr/lib/python3.14/site-packages/Bio/HMM/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/HMM/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Phylo/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Phylo/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Phylo/PAML/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Phylo/PAML/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Restriction/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Restriction/__pycache__'
'usr/lib/python3.14/site-packages/Bio/AlignIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/AlignIO/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Compass/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Compass/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Nexus/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Nexus/__pycache__'
'usr/lib/python3.14/site-packages/Bio/codonalign/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/codonalign/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Cluster/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Cluster/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Graphics/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Graphics/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Graphics/GenomeDiagram/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Graphics/GenomeDiagram/__pycache__'
'usr/lib/python3.14/site-packages/Bio/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Sequencing/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Sequencing/__pycache__'
'usr/lib/python3.14/site-packages/Bio/KEGG/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/KEGG/__pycache__'
'usr/lib/python3.14/site-packages/Bio/KEGG/Gene/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/KEGG/Gene/__pycache__'
'usr/lib/python3.14/site-packages/Bio/KEGG/KGML/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/KEGG/KGML/__pycache__'
'usr/lib/python3.14/site-packages/Bio/KEGG/Map/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/KEGG/Map/__pycache__'
'usr/lib/python3.14/site-packages/Bio/KEGG/Compound/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/KEGG/Compound/__pycache__'
'usr/lib/python3.14/site-packages/Bio/KEGG/Enzyme/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/KEGG/Enzyme/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Pathway/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Pathway/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Pathway/Rep/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Pathway/Rep/__pycache__'
'usr/lib/python3.14/site-packages/Bio/SCOP/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SCOP/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Data/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Data/__pycache__'
'usr/lib/python3.14/site-packages/Bio/TogoWS/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/TogoWS/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Medline/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Medline/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Blast/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Blast/__pycache__'
'usr/lib/python3.14/site-packages/Bio/PopGen/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/PopGen/__pycache__'
'usr/lib/python3.14/site-packages/Bio/PopGen/GenePop/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/PopGen/GenePop/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Emboss/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Emboss/__pycache__'
'usr/lib/python3.14/site-packages/Bio/SwissProt/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SwissProt/__pycache__'
'usr/lib/python3.14/site-packages/Bio/UniProt/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/UniProt/__pycache__'
'usr/lib/python3.14/site-packages/Bio/SearchIO/HHsuiteIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/HHsuiteIO/__pycache__'
'usr/lib/python3.14/site-packages/Bio/SearchIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/__pycache__'
'usr/lib/python3.14/site-packages/Bio/SearchIO/BlastIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/BlastIO/__pycache__'
'usr/lib/python3.14/site-packages/Bio/SearchIO/_model/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/_model/__pycache__'
'usr/lib/python3.14/site-packages/Bio/SearchIO/ExonerateIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/ExonerateIO/__pycache__'
'usr/lib/python3.14/site-packages/Bio/SearchIO/HmmerIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/HmmerIO/__pycache__'
'usr/lib/python3.14/site-packages/Bio/SearchIO/InterproscanIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/InterproscanIO/__pycache__'
'usr/lib/python3.14/site-packages/Bio/SearchIO/InfernalIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/InfernalIO/__pycache__'
'usr/lib/python3.14/site-packages/Bio/CAPS/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/CAPS/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Affy/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Affy/__pycache__'
'usr/lib/python3.14/site-packages/Bio/SVDSuperimposer/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SVDSuperimposer/__pycache__'
'usr/lib/python3.14/site-packages/Bio/SeqUtils/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SeqUtils/__pycache__'
'usr/lib/python3.14/site-packages/Bio/motifs/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/motifs/__pycache__'
'usr/lib/python3.14/site-packages/Bio/motifs/jaspar/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/motifs/jaspar/__pycache__'
'usr/lib/python3.14/site-packages/Bio/phenotype/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/phenotype/__pycache__'
'usr/lib/python3.14/site-packages/Bio/NMR/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/NMR/__pycache__'
'usr/lib/python3.14/site-packages/Bio/PDB/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/PDB/__pycache__'
'usr/lib/python3.14/site-packages/Bio/PDB/mmtf/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/PDB/mmtf/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Entrez/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Entrez/__pycache__'
'usr/lib/python3.14/site-packages/Bio/GenBank/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/GenBank/__pycache__'
'usr/lib/python3.14/site-packages/Bio/SeqIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SeqIO/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Geo/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Geo/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Alphabet/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Alphabet/__pycache__'
'usr/lib/python3.14/site-packages/Bio/UniGene/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/UniGene/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Align/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Align/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Align/substitution_matrices/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Align/substitution_matrices/__pycache__'
'usr/lib/python3.14/site-packages/Bio/ExPASy/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/ExPASy/__pycache__'
>>> py3-biopython-pyc*: Preparing subpackage py3-biopython-pyc...
>>> py3-biopython-pyc*: Running postcheck for py3-biopython-pyc
>>> py3-biopython*: Running postcheck for py3-biopython
>>> py3-biopython*: Preparing package py3-biopython...
>>> py3-biopython*: Stripping binaries
>>> py3-biopython*: Scanning shared objects
>>> py3-biopython-pyc*: Tracing dependencies...
	python3~3.14
>>> py3-biopython-pyc*: Package size: 6.2 MB
>>> py3-biopython-pyc*: Compressing data...
>>> py3-biopython-pyc*: Create checksum...
>>> py3-biopython-pyc*: Create py3-biopython-pyc-1.87-r0.apk
>>> py3-biopython*: Tracing dependencies...
	py3-numpy
	python3
	python3~3.14
	so:libc.musl-armhf.so.1
>>> py3-biopython*: Package size: 10.8 MB
>>> py3-biopython*: Compressing data...
>>> py3-biopython*: Create checksum...
>>> py3-biopython*: Create py3-biopython-1.87-r0.apk
>>> py3-biopython: Build complete at Mon, 11 May 2026 01:57:05 +0000 elapsed time 0h 0m 21s
>>> py3-biopython: Cleaning up srcdir
>>> py3-biopython: Cleaning up pkgdir
>>> py3-biopython: Cleaning up tmpdir
>>> py3-biopython: Uninstalling dependencies...
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Executing busybox-1.37.0-r31.trigger
OK: 342.2 MiB in 103 packages
>>> py3-biopython: Updating the community/armhf repository index...
>>> py3-biopython: Signing the index...