>>> py3-bioframe: Building community/py3-bioframe 0.6.4-r1 (using abuild 3.12.0-r5) started Fri, 12 Apr 2024 23:07:27 +0000 >>> py3-bioframe: Checking sanity of /home/buildozer/aports/community/py3-bioframe/APKBUILD... >>> py3-bioframe: Analyzing dependencies... >>> py3-bioframe: Installing for build: build-base py3-matplotlib py3-numpy py3-pandas py3-yaml py3-requests py3-typing-extensions py3-setuptools py3-gpep517 py3-hatchling py3-wheel py3-pytest-xdist (1/115) Installing libffi (3.4.6-r0) (2/115) Installing gdbm (1.23-r1) (3/115) Installing mpdecimal (4.0.0-r0) (4/115) Installing libpanelw (6.4_p20240330-r0) (5/115) Installing readline (8.2.10-r0) (6/115) Installing sqlite-libs (3.45.2-r0) (7/115) Installing python3 (3.12.2-r1) (8/115) Installing python3-pycache-pyc0 (3.12.2-r1) (9/115) Installing pyc (3.12.2-r1) (10/115) Installing py3-cairo-pyc (1.26.0-r1) (11/115) Installing py3-certifi (2024.2.2-r1) (12/115) Installing py3-certifi-pyc (2024.2.2-r1) (13/115) Installing libgfortran (13.2.1_git20240309-r0) (14/115) Installing openblas (0.3.27-r0) (15/115) Installing py3-numpy (1.25.2-r1) (16/115) Installing py3-numpy-pyc (1.25.2-r1) (17/115) Installing py3-contourpy (1.2.1-r1) (18/115) Installing py3-contourpy-pyc (1.2.1-r1) (19/115) Installing py3-cycler (0.12.1-r1) (20/115) Installing py3-cycler-pyc (0.12.1-r1) (21/115) Installing py3-six (1.16.0-r9) (22/115) Installing py3-six-pyc (1.16.0-r9) (23/115) Installing py3-dateutil (2.9.0-r1) (24/115) Installing py3-dateutil-pyc (2.9.0-r1) (25/115) Installing py3-fonttools (4.51.0-r1) (26/115) Installing py3-fonttools-pyc (4.51.0-r1) (27/115) Installing py3-kiwisolver (1.4.5-r1) (28/115) Installing py3-kiwisolver-pyc (1.4.5-r1) (29/115) Installing py3-parsing (3.1.2-r1) (30/115) Installing py3-parsing-pyc (3.1.2-r1) (31/115) Installing py3-packaging (24.0-r1) (32/115) Installing py3-packaging-pyc (24.0-r1) (33/115) Installing libpng (1.6.43-r0) (34/115) Installing freetype (2.13.2-r0) (35/115) Installing libimagequant (4.2.2-r0) (36/115) Installing libjpeg-turbo (3.0.2-r0) (37/115) Installing lcms2 (2.16-r0) (38/115) Installing openjpeg (2.5.2-r0) (39/115) Installing libsharpyuv (1.3.2-r0) (40/115) Installing libwebp (1.3.2-r0) (41/115) Installing tiff (4.6.0t-r0) (42/115) Installing libwebpdemux (1.3.2-r0) (43/115) Installing libwebpmux (1.3.2-r0) (44/115) Installing libxau (1.0.11-r4) (45/115) Installing libmd (1.1.0-r0) (46/115) Installing libbsd (0.12.2-r0) (47/115) Installing libxdmcp (1.1.5-r1) (48/115) Installing libxcb (1.16.1-r0) (49/115) Installing py3-pillow (10.3.0-r2) (50/115) Installing py3-pillow-pyc (10.3.0-r2) (51/115) Installing py3-tz (2024.1-r1) (52/115) Installing py3-tz-pyc (2024.1-r1) (53/115) Installing tzdata (2024a-r1) (54/115) Installing tcl (8.6.14-r0) (55/115) Installing libx11 (1.8.9-r1) (56/115) Installing libxrender (0.9.11-r5) (57/115) Installing fontconfig (2.15.0-r1) (58/115) Installing libxft (2.3.8-r3) (59/115) Installing tk (8.6.14-r0) (60/115) Installing python3-tkinter (3.12.2-r0) (61/115) Installing python3-tkinter-pyc (3.12.2-r0) (62/115) Installing py3-matplotlib-pyc (3.7.3-r1) (63/115) Installing python3-pyc (3.12.2-r1) (64/115) Installing libxext (1.3.6-r2) (65/115) Installing pixman (0.43.2-r0) (66/115) Installing cairo (1.18.0-r0) (67/115) Installing py3-cairo (1.26.0-r1) (68/115) Installing qhull (2020.2-r3) (69/115) Installing py3-matplotlib (3.7.3-r1) (70/115) Installing py3-pandas (2.0.3-r1) (71/115) Installing py3-pandas-pyc (2.0.3-r1) (72/115) Installing yaml (0.2.5-r2) (73/115) Installing py3-yaml (6.0.1-r3) (74/115) Installing py3-yaml-pyc (6.0.1-r3) (75/115) Installing py3-charset-normalizer (3.3.2-r1) (76/115) Installing py3-charset-normalizer-pyc (3.3.2-r1) (77/115) Installing py3-idna (3.6-r1) (78/115) Installing py3-idna-pyc (3.6-r1) (79/115) Installing py3-urllib3 (1.26.18-r1) (80/115) Installing py3-urllib3-pyc (1.26.18-r1) (81/115) Installing py3-requests (2.31.0-r2) (82/115) Installing py3-requests-pyc (2.31.0-r2) (83/115) Installing py3-typing-extensions (4.11.0-r1) (84/115) Installing py3-typing-extensions-pyc (4.11.0-r1) (85/115) Installing py3-setuptools (69.2.0-r2) (86/115) Installing py3-setuptools-pyc (69.2.0-r2) (87/115) Installing py3-installer (0.7.0-r2) (88/115) Installing py3-installer-pyc (0.7.0-r2) (89/115) Installing py3-gpep517 (15-r2) (90/115) Installing py3-gpep517-pyc (15-r2) (91/115) Installing py3-editables (0.5-r2) (92/115) Installing py3-editables-pyc (0.5-r2) (93/115) Installing py3-pathspec (0.12.1-r2) (94/115) Installing py3-pathspec-pyc (0.12.1-r2) (95/115) Installing py3-pluggy (1.4.0-r1) (96/115) Installing py3-pluggy-pyc (1.4.0-r1) (97/115) Installing py3-trove-classifiers (2024.3.3-r2) (98/115) Installing py3-trove-classifiers-pyc (2024.3.3-r2) (99/115) Installing py3-hatchling (1.22.5-r1) (100/115) Installing py3-hatchling-pyc (1.22.5-r1) (101/115) Installing py3-wheel (0.42.0-r1) (102/115) Installing py3-wheel-pyc (0.42.0-r1) (103/115) Installing py3-apipkg (2.1.0-r3) (104/115) Installing py3-apipkg-pyc (2.1.0-r3) (105/115) Installing py3-execnet (1.9.0-r3) (106/115) Installing py3-execnet-pyc (1.9.0-r3) (107/115) Installing py3-iniconfig (2.0.0-r1) (108/115) Installing py3-iniconfig-pyc (2.0.0-r1) (109/115) Installing py3-py (1.11.0-r3) (110/115) Installing py3-py-pyc (1.11.0-r3) (111/115) Installing py3-pytest (8.1.1-r1) (112/115) Installing py3-pytest-pyc (8.1.1-r1) (113/115) Installing py3-pytest-xdist (3.5.0-r1) (114/115) Installing py3-pytest-xdist-pyc (3.5.0-r1) (115/115) Installing .makedepends-py3-bioframe (20240412.230729) Executing busybox-1.36.1-r25.trigger OK: 506 MiB in 225 packages >>> py3-bioframe: Cleaning up srcdir >>> py3-bioframe: Cleaning up pkgdir >>> py3-bioframe: Cleaning up tmpdir >>> py3-bioframe: Fetching https://distfiles.alpinelinux.org/distfiles/edge/bioframe-0.6.4.tar.gz >>> py3-bioframe: Fetching https://distfiles.alpinelinux.org/distfiles/edge/bioframe-0.6.4.tar.gz >>> py3-bioframe: Checking sha512sums... bioframe-0.6.4.tar.gz: OK >>> py3-bioframe: Unpacking /var/cache/distfiles/bioframe-0.6.4.tar.gz... 2024-04-12 23:07:31,350 gpep517 INFO Building wheel via backend hatchling.build 2024-04-12 23:07:31,457 gpep517 INFO The backend produced .dist/bioframe-0.6.4-py2.py3-none-any.whl bioframe-0.6.4-py2.py3-none-any.whl ============================= test session starts ============================== platform linux -- Python 3.12.2, pytest-8.1.1, pluggy-1.4.0 rootdir: /home/buildozer/aports/community/py3-bioframe/src/bioframe-0.6.4 configfile: pyproject.toml plugins: xdist-3.5.0 created: 64/64 workers 64 workers [59 items] ....ss.........s........................................... [100%] =============================== warnings summary =============================== tests/test_assembly_info.py: 6 warnings tests/test_resources.py: 10 warnings /usr/lib/python3.12/site-packages/pandas/core/computation/expr.py:557: DeprecationWarning: Attribute n is deprecated and will be removed in Python 3.14; use value instead return self.const_type(node.n, self.env) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ================= 56 passed, 3 skipped, 16 warnings in 13.58s ================== >>> py3-bioframe: Entering fakeroot... >>> py3-bioframe-pyc*: Running split function pyc... '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe/usr/lib/python3.12/site-packages/bioframe/core/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/core/__pycache__' '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe/usr/lib/python3.12/site-packages/bioframe/io/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/io/__pycache__' '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe/usr/lib/python3.12/site-packages/bioframe/sandbox/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/sandbox/__pycache__' '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe/usr/lib/python3.12/site-packages/bioframe/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/__pycache__' >>> py3-bioframe-pyc*: Preparing subpackage py3-bioframe-pyc... >>> py3-bioframe-pyc*: Running postcheck for py3-bioframe-pyc >>> py3-bioframe*: Running postcheck for py3-bioframe >>> py3-bioframe*: Preparing package py3-bioframe... >>> py3-bioframe-pyc*: Tracing dependencies... py3-matplotlib py3-numpy py3-pandas py3-yaml py3-requests py3-typing-extensions py3-setuptools python3~3.12 >>> py3-bioframe-pyc*: Package size: 320.0 KB >>> py3-bioframe-pyc*: Compressing data... >>> py3-bioframe-pyc*: Create checksum... >>> py3-bioframe-pyc*: Create py3-bioframe-pyc-0.6.4-r1.apk >>> py3-bioframe*: Tracing dependencies... py3-matplotlib py3-numpy py3-pandas py3-yaml py3-requests py3-typing-extensions py3-setuptools python3~3.12 >>> py3-bioframe*: Package size: 304.0 KB >>> py3-bioframe*: Compressing data... >>> py3-bioframe*: Create checksum... >>> py3-bioframe*: Create py3-bioframe-0.6.4-r1.apk >>> py3-bioframe: Build complete at Fri, 12 Apr 2024 23:07:46 +0000 elapsed time 0h 0m 19s >>> py3-bioframe: Cleaning up srcdir >>> py3-bioframe: Cleaning up pkgdir >>> py3-bioframe: Uninstalling dependencies... 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