>>> py3-bioframe: Building community/py3-bioframe 0.7.2-r1 (using abuild 3.13.0-r5) started Tue, 01 Oct 2024 10:27:06 +0000 >>> py3-bioframe: Checking sanity of /home/buildozer/aports/community/py3-bioframe/APKBUILD... >>> py3-bioframe: Analyzing dependencies... >>> py3-bioframe: Installing for build: build-base py3-matplotlib py3-numpy py3-pandas py3-yaml py3-requests py3-typing-extensions py3-setuptools py3-gpep517 py3-hatchling py3-wheel py3-pytest-xdist (1/116) Installing libffi (3.4.6-r0) (2/116) Installing gdbm (1.24-r0) (3/116) Installing mpdecimal (4.0.0-r0) (4/116) Installing libpanelw (6.5_p20240601-r1) (5/116) Installing sqlite-libs (3.46.1-r0) (6/116) Installing python3 (3.12.6-r0) (7/116) Installing python3-pycache-pyc0 (3.12.6-r0) (8/116) Installing pyc (3.12.6-r0) (9/116) Installing py3-cairo-pyc (1.27.0-r0) (10/116) Installing py3-certifi (2024.8.30-r0) (11/116) Installing py3-certifi-pyc (2024.8.30-r0) (12/116) Installing libgfortran (14.2.0-r3) (13/116) Installing openblas (0.3.28-r0) (14/116) Installing py3-numpy (1.25.2-r1) (15/116) Installing py3-numpy-pyc (1.25.2-r1) (16/116) Installing py3-contourpy (1.3.0-r0) (17/116) Installing py3-contourpy-pyc (1.3.0-r0) (18/116) Installing py3-cycler (0.12.1-r1) (19/116) Installing py3-cycler-pyc (0.12.1-r1) (20/116) Installing py3-six (1.16.0-r9) (21/116) Installing py3-six-pyc (1.16.0-r9) (22/116) Installing py3-dateutil (2.9.0-r1) (23/116) Installing py3-dateutil-pyc (2.9.0-r1) (24/116) Installing py3-fonttools (4.53.1-r0) (25/116) Installing py3-fonttools-pyc (4.53.1-r0) (26/116) Installing py3-kiwisolver (1.4.5-r1) (27/116) Installing py3-kiwisolver-pyc (1.4.5-r1) (28/116) Installing py3-parsing (3.1.4-r0) (29/116) Installing py3-parsing-pyc (3.1.4-r0) (30/116) Installing py3-packaging (24.1-r0) (31/116) Installing py3-packaging-pyc (24.1-r0) (32/116) Installing libpng (1.6.44-r0) (33/116) Installing freetype (2.13.3-r0) (34/116) Installing libimagequant (4.2.2-r0) (35/116) Installing libjpeg-turbo (3.0.4-r0) (36/116) Installing lcms2 (2.16-r0) (37/116) Installing openjpeg (2.5.2-r0) (38/116) Installing libsharpyuv (1.4.0-r0) (39/116) Installing libwebp (1.4.0-r0) (40/116) Installing tiff (4.6.0t-r0) (41/116) Installing libwebpdemux (1.4.0-r0) (42/116) Installing libwebpmux (1.4.0-r0) (43/116) Installing libxau (1.0.11-r4) (44/116) Installing libmd (1.1.0-r0) (45/116) Installing libbsd (0.12.2-r0) (46/116) Installing libxdmcp (1.1.5-r1) (47/116) Installing libxcb (1.16.1-r0) (48/116) Installing py3-pillow (10.4.0-r0) (49/116) Installing py3-pillow-pyc (10.4.0-r0) (50/116) Installing py3-tz (2024.2-r0) (51/116) Installing py3-tz-pyc (2024.2-r0) (52/116) Installing tzdata (2024b-r1) (53/116) Installing tcl (8.6.15-r0) (54/116) Installing libx11 (1.8.10-r0) (55/116) Installing libxrender (0.9.11-r5) (56/116) Installing fontconfig (2.15.0-r1) (57/116) Installing libxft (2.3.8-r3) (58/116) Installing tk (8.6.15-r0) (59/116) Installing python3-tkinter (3.12.5-r0) (60/116) Installing python3-tkinter-pyc (3.12.5-r0) (61/116) Installing py3-matplotlib-pyc (3.7.3-r2) (62/116) Installing python3-pyc (3.12.6-r0) (63/116) Installing libxext (1.3.6-r2) (64/116) Installing pixman (0.43.4-r0) (65/116) Installing cairo (1.18.2-r0) (66/116) Installing py3-cairo (1.27.0-r0) (67/116) Installing qhull (2020.2-r3) (68/116) Installing py3-matplotlib (3.7.3-r2) (69/116) Installing py3-attrs (24.2.0-r0) (70/116) Installing py3-attrs-pyc (24.2.0-r0) (71/116) Installing py3-tzdata (2024.2-r0) (72/116) Installing py3-tzdata-pyc (2024.2-r0) (73/116) Installing py3-pandas (2.0.3-r2) (74/116) Installing py3-pandas-pyc (2.0.3-r2) (75/116) Installing yaml (0.2.5-r2) (76/116) Installing py3-yaml (6.0.2-r0) (77/116) Installing py3-yaml-pyc (6.0.2-r0) (78/116) Installing py3-charset-normalizer (3.3.2-r1) (79/116) Installing py3-charset-normalizer-pyc (3.3.2-r1) (80/116) Installing py3-idna (3.10-r0) (81/116) Installing py3-idna-pyc (3.10-r0) (82/116) Installing py3-urllib3 (1.26.20-r0) (83/116) Installing py3-urllib3-pyc (1.26.20-r0) (84/116) Installing py3-requests (2.32.3-r0) (85/116) Installing py3-requests-pyc (2.32.3-r0) (86/116) Installing py3-typing-extensions (4.12.2-r0) (87/116) Installing py3-typing-extensions-pyc (4.12.2-r0) (88/116) Installing py3-setuptools (70.3.0-r0) (89/116) Installing py3-setuptools-pyc (70.3.0-r0) (90/116) Installing py3-installer (0.7.0-r2) (91/116) Installing py3-installer-pyc (0.7.0-r2) (92/116) Installing py3-gpep517 (16-r0) (93/116) Installing py3-gpep517-pyc (16-r0) (94/116) Installing py3-editables (0.5-r2) (95/116) Installing py3-editables-pyc (0.5-r2) (96/116) Installing py3-pathspec (0.12.1-r2) (97/116) Installing py3-pathspec-pyc (0.12.1-r2) (98/116) Installing py3-pluggy (1.5.0-r0) (99/116) Installing py3-pluggy-pyc (1.5.0-r0) (100/116) Installing py3-trove-classifiers (2024.9.12-r0) (101/116) Installing py3-trove-classifiers-pyc (2024.9.12-r0) (102/116) Installing py3-hatchling (1.25.0-r0) (103/116) Installing py3-hatchling-pyc (1.25.0-r0) (104/116) Installing py3-wheel (0.43.0-r0) (105/116) Installing py3-wheel-pyc (0.43.0-r0) (106/116) Installing py3-execnet (2.1.1-r0) (107/116) Installing py3-execnet-pyc (2.1.1-r0) (108/116) Installing py3-iniconfig (2.0.0-r1) (109/116) Installing py3-iniconfig-pyc (2.0.0-r1) (110/116) Installing py3-py (1.11.0-r4) (111/116) Installing py3-py-pyc (1.11.0-r4) (112/116) Installing py3-pytest (8.3.3-r0) (113/116) Installing py3-pytest-pyc (8.3.3-r0) (114/116) Installing py3-pytest-xdist (3.6.1-r0) (115/116) Installing py3-pytest-xdist-pyc (3.6.1-r0) (116/116) Installing .makedepends-py3-bioframe (20241001.102707) Executing busybox-1.36.1-r32.trigger OK: 530 MiB in 226 packages >>> py3-bioframe: Cleaning up srcdir >>> py3-bioframe: Cleaning up pkgdir >>> py3-bioframe: Cleaning up tmpdir >>> py3-bioframe: Fetching https://distfiles.alpinelinux.org/distfiles/edge/bioframe-0.7.2.tar.gz >>> py3-bioframe: Fetching https://distfiles.alpinelinux.org/distfiles/edge/bioframe-0.7.2.tar.gz >>> py3-bioframe: Checking sha512sums... bioframe-0.7.2.tar.gz: OK >>> py3-bioframe: Unpacking /var/cache/distfiles/bioframe-0.7.2.tar.gz... 2024-10-01 10:27:09,744 gpep517 INFO Building wheel via backend hatchling.build 2024-10-01 10:27:09,854 gpep517 INFO The backend produced .dist/bioframe-0.7.2-py2.py3-none-any.whl bioframe-0.7.2-py2.py3-none-any.whl ============================= test session starts ============================== platform linux -- Python 3.12.6, pytest-8.3.3, pluggy-1.5.0 rootdir: /home/buildozer/aports/community/py3-bioframe/src/bioframe-0.7.2 configfile: pyproject.toml plugins: xdist-3.6.1 created: 64/64 workers 64 workers [68 items] ...s..............ss................................................ [100%] =============================== warnings summary =============================== tests/test_assembly_info.py: 6 warnings tests/test_resources.py: 10 warnings /usr/lib/python3.12/site-packages/pandas/core/computation/expr.py:557: DeprecationWarning: Attribute n is deprecated and will be removed in Python 3.14; use value instead return self.const_type(node.n, self.env) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ================= 65 passed, 3 skipped, 16 warnings in 11.85s ================== >>> py3-bioframe: Entering fakeroot... >>> py3-bioframe-doc*: Running split function doc... >>> py3-bioframe-doc*: Preparing subpackage py3-bioframe-doc... >>> py3-bioframe-doc*: Running postcheck for py3-bioframe-doc >>> py3-bioframe-pyc*: Running split function pyc... '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe/usr/lib/python3.12/site-packages/bioframe/core/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/core/__pycache__' '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe/usr/lib/python3.12/site-packages/bioframe/io/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/io/__pycache__' '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe/usr/lib/python3.12/site-packages/bioframe/sandbox/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/sandbox/__pycache__' '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe/usr/lib/python3.12/site-packages/bioframe/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/__pycache__' >>> py3-bioframe-pyc*: Preparing subpackage py3-bioframe-pyc... >>> py3-bioframe-pyc*: Running postcheck for py3-bioframe-pyc >>> py3-bioframe*: Running postcheck for py3-bioframe >>> py3-bioframe*: Preparing package py3-bioframe... >>> py3-bioframe-doc*: Tracing dependencies... >>> py3-bioframe-doc*: Package size: 32.0 KB >>> py3-bioframe-doc*: Compressing data... >>> py3-bioframe-doc*: Create checksum... >>> py3-bioframe-doc*: Create py3-bioframe-doc-0.7.2-r1.apk >>> py3-bioframe-pyc*: Tracing dependencies... py3-matplotlib py3-numpy py3-pandas py3-yaml py3-requests py3-typing-extensions py3-setuptools python3~3.12 >>> py3-bioframe-pyc*: Package size: 348.0 KB >>> py3-bioframe-pyc*: Compressing data... >>> py3-bioframe-pyc*: Create checksum... >>> py3-bioframe-pyc*: Create py3-bioframe-pyc-0.7.2-r1.apk >>> py3-bioframe*: Tracing dependencies... py3-matplotlib py3-numpy py3-pandas py3-yaml py3-requests py3-typing-extensions py3-setuptools python3~3.12 >>> py3-bioframe*: Package size: 328.0 KB >>> py3-bioframe*: Compressing data... >>> py3-bioframe*: Create checksum... >>> py3-bioframe*: Create py3-bioframe-0.7.2-r1.apk >>> py3-bioframe: Build complete at Tue, 01 Oct 2024 10:27:23 +0000 elapsed time 0h 0m 17s >>> py3-bioframe: Cleaning up srcdir >>> py3-bioframe: Cleaning up pkgdir >>> py3-bioframe: Uninstalling dependencies... (1/116) Purging .makedepends-py3-bioframe (20241001.102707) (2/116) Purging py3-matplotlib-pyc (3.7.3-r2) (3/116) Purging py3-matplotlib (3.7.3-r2) (4/116) Purging py3-cairo-pyc (1.27.0-r0) (5/116) Purging py3-cairo (1.27.0-r0) (6/116) Purging py3-contourpy-pyc (1.3.0-r0) (7/116) Purging py3-contourpy (1.3.0-r0) (8/116) Purging py3-cycler-pyc (0.12.1-r1) (9/116) Purging py3-cycler (0.12.1-r1) (10/116) Purging py3-fonttools-pyc (4.53.1-r0) (11/116) Purging py3-fonttools (4.53.1-r0) (12/116) Purging py3-kiwisolver-pyc (1.4.5-r1) (13/116) Purging py3-kiwisolver (1.4.5-r1) (14/116) Purging py3-pillow-pyc (10.4.0-r0) (15/116) Purging py3-pillow (10.4.0-r0) (16/116) Purging python3-tkinter-pyc (3.12.5-r0) (17/116) Purging python3-tkinter (3.12.5-r0) (18/116) Purging py3-pandas-pyc (2.0.3-r2) (19/116) Purging py3-pandas (2.0.3-r2) (20/116) Purging py3-dateutil-pyc (2.9.0-r1) (21/116) Purging py3-dateutil (2.9.0-r1) (22/116) Purging py3-six-pyc (1.16.0-r9) (23/116) Purging py3-six (1.16.0-r9) (24/116) Purging py3-numpy-pyc (1.25.2-r1) (25/116) Purging py3-numpy (1.25.2-r1) (26/116) Purging openblas (0.3.28-r0) (27/116) Purging py3-tz-pyc (2024.2-r0) (28/116) Purging py3-tz (2024.2-r0) (29/116) Purging py3-tzdata-pyc (2024.2-r0) (30/116) Purging py3-tzdata (2024.2-r0) (31/116) Purging py3-attrs-pyc (24.2.0-r0) (32/116) Purging py3-attrs (24.2.0-r0) (33/116) Purging py3-yaml-pyc (6.0.2-r0) (34/116) Purging py3-yaml (6.0.2-r0) (35/116) Purging py3-requests-pyc (2.32.3-r0) (36/116) Purging py3-requests (2.32.3-r0) (37/116) Purging py3-certifi-pyc (2024.8.30-r0) (38/116) Purging py3-certifi (2024.8.30-r0) (39/116) Purging py3-charset-normalizer-pyc (3.3.2-r1) (40/116) Purging py3-charset-normalizer (3.3.2-r1) (41/116) Purging py3-idna-pyc (3.10-r0) (42/116) Purging py3-idna (3.10-r0) (43/116) Purging py3-urllib3-pyc (1.26.20-r0) (44/116) Purging py3-urllib3 (1.26.20-r0) (45/116) Purging py3-typing-extensions-pyc (4.12.2-r0) (46/116) Purging py3-typing-extensions (4.12.2-r0) (47/116) Purging py3-setuptools-pyc (70.3.0-r0) (48/116) Purging py3-setuptools (70.3.0-r0) (49/116) Purging py3-gpep517-pyc (16-r0) (50/116) Purging py3-gpep517 (16-r0) (51/116) Purging py3-installer-pyc (0.7.0-r2) (52/116) Purging py3-installer (0.7.0-r2) (53/116) Purging py3-hatchling-pyc (1.25.0-r0) (54/116) Purging py3-hatchling (1.25.0-r0) (55/116) Purging py3-editables-pyc (0.5-r2) (56/116) Purging py3-editables (0.5-r2) (57/116) Purging py3-pathspec-pyc (0.12.1-r2) (58/116) Purging py3-pathspec (0.12.1-r2) (59/116) Purging py3-trove-classifiers-pyc (2024.9.12-r0) (60/116) Purging py3-trove-classifiers (2024.9.12-r0) (61/116) Purging py3-wheel-pyc (0.43.0-r0) (62/116) Purging py3-wheel (0.43.0-r0) (63/116) Purging py3-pytest-xdist-pyc (3.6.1-r0) (64/116) Purging py3-pytest-xdist (3.6.1-r0) (65/116) Purging py3-execnet-pyc (2.1.1-r0) (66/116) Purging py3-execnet (2.1.1-r0) (67/116) Purging py3-pytest-pyc (8.3.3-r0) (68/116) Purging py3-pytest (8.3.3-r0) (69/116) Purging py3-iniconfig-pyc (2.0.0-r1) (70/116) Purging py3-iniconfig (2.0.0-r1) (71/116) Purging py3-packaging-pyc (24.1-r0) (72/116) Purging py3-packaging (24.1-r0) (73/116) Purging py3-parsing-pyc (3.1.4-r0) (74/116) Purging py3-parsing (3.1.4-r0) (75/116) Purging py3-pluggy-pyc (1.5.0-r0) (76/116) Purging py3-pluggy (1.5.0-r0) (77/116) Purging py3-py-pyc (1.11.0-r4) (78/116) Purging py3-py (1.11.0-r4) (79/116) Purging python3-pyc (3.12.6-r0) (80/116) Purging python3-pycache-pyc0 (3.12.6-r0) (81/116) Purging pyc (3.12.6-r0) (82/116) Purging python3 (3.12.6-r0) (83/116) Purging cairo (1.18.2-r0) (84/116) Purging gdbm (1.24-r0) (85/116) Purging lcms2 (2.16-r0) (86/116) Purging libffi (3.4.6-r0) (87/116) Purging libgfortran (14.2.0-r3) (88/116) Purging libimagequant (4.2.2-r0) (89/116) Purging libpanelw (6.5_p20240601-r1) (90/116) Purging libwebpdemux (1.4.0-r0) (91/116) Purging libwebpmux (1.4.0-r0) (92/116) Purging libxext (1.3.6-r2) (93/116) Purging mpdecimal (4.0.0-r0) (94/116) Purging openjpeg (2.5.2-r0) (95/116) Purging pixman (0.43.4-r0) (96/116) Purging qhull (2020.2-r3) (97/116) Purging sqlite-libs (3.46.1-r0) (98/116) Purging tiff (4.6.0t-r0) (99/116) Purging tk (8.6.15-r0) (100/116) Purging yaml (0.2.5-r2) (101/116) Purging libxft (2.3.8-r3) (102/116) Purging fontconfig (2.15.0-r1) (103/116) Purging freetype (2.13.3-r0) (104/116) Purging libxrender (0.9.11-r5) (105/116) Purging libx11 (1.8.10-r0) (106/116) Purging libxcb (1.16.1-r0) (107/116) Purging libxdmcp (1.1.5-r1) (108/116) Purging libbsd (0.12.2-r0) (109/116) Purging libjpeg-turbo (3.0.4-r0) (110/116) Purging libmd (1.1.0-r0) (111/116) Purging libpng (1.6.44-r0) (112/116) Purging libwebp (1.4.0-r0) (113/116) Purging libsharpyuv (1.4.0-r0) (114/116) Purging libxau (1.0.11-r4) (115/116) Purging tcl (8.6.15-r0) (116/116) Purging tzdata (2024b-r1) Executing busybox-1.36.1-r32.trigger OK: 283 MiB in 110 packages >>> py3-bioframe: Updating the community/ppc64le repository index... >>> py3-bioframe: Signing the index...