>>> py3-bioframe: Building community/py3-bioframe 0.8.0-r0 (using abuild 3.15.0_rc2-r0) started Thu, 10 Apr 2025 13:07:35 +0000
>>> py3-bioframe: Validating /home/buildozer/aports/community/py3-bioframe/APKBUILD...
>>> py3-bioframe: Analyzing dependencies...
>>> py3-bioframe: Installing for build: build-base py3-matplotlib py3-numpy py3-pandas py3-yaml py3-requests py3-typing-extensions py3-setuptools py3-gpep517 py3-hatchling py3-wheel py3-pytest-xdist
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(7/107) Installing mpdecimal (4.0.0-r0)
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(9/107) Installing sqlite-libs (3.49.1-r0)
(10/107) Installing python3 (3.12.10-r0)
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(107/107) Installing .makedepends-py3-bioframe (20250410.130736)
Executing busybox-1.37.0-r15.trigger
OK: 499 MiB in 210 packages
>>> py3-bioframe: Cleaning up srcdir
>>> py3-bioframe: Cleaning up pkgdir
>>> py3-bioframe: Cleaning up tmpdir
>>> py3-bioframe: Fetching https://distfiles.alpinelinux.org/distfiles/edge/bioframe-0.8.0.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
curl: (22) The requested URL returned error: 404
>>> py3-bioframe: Fetching https://github.com/open2c/bioframe/archive/v0.8.0/bioframe-0.8.0.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

100 13162    0 13162    0     0   8259      0 --:--:--  0:00:01 --:--:--  8259
100  433k    0  433k    0     0   172k      0 --:--:--  0:00:02 --:--:--  459k
100  952k    0  952k    0     0   357k      0 --:--:--  0:00:02 --:--:--  877k
>>> py3-bioframe: Fetching https://distfiles.alpinelinux.org/distfiles/edge/bioframe-0.8.0.tar.gz
>>> py3-bioframe: Checking sha512sums...
bioframe-0.8.0.tar.gz: OK
>>> py3-bioframe: Unpacking /var/cache/distfiles/bioframe-0.8.0.tar.gz...
2025-04-10 13:07:43,282 gpep517 INFO Building wheel via backend hatchling.build
2025-04-10 13:07:43,433 gpep517 INFO The backend produced .dist/bioframe-0.8.0-py3-none-any.whl
bioframe-0.8.0-py3-none-any.whl
============================= test session starts ==============================
platform linux -- Python 3.12.10, pytest-8.3.5, pluggy-1.5.0
rootdir: /home/buildozer/aports/community/py3-bioframe/src/bioframe-0.8.0
configfile: pyproject.toml
testpaths: tests
plugins: xdist-3.6.1
created: 64/64 workers
64 workers [70 items]

ss..........s.........................................................   [100%]
=========================== short test summary info ============================
SKIPPED [1] tests/test_extras.py:97: could not import 'pysam': No module named 'pysam'
SKIPPED [1] tests/test_extras.py:85: could not import 'Bio': No module named 'Bio'
SKIPPED [1] tests/test_extras.py:129: could not import 'pysam': No module named 'pysam'
======================== 67 passed, 3 skipped in 17.36s ========================
/usr/lib/python3.12/site-packages/_pytest/pathlib.py:96: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-2e571536-f3a1-45a0-94f3-11c48867968c/popen-gw56/test_discovery_via_path_in_non0
<class 'OSError'>: [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-2e571536-f3a1-45a0-94f3-11c48867968c/popen-gw56/test_discovery_via_path_in_non0'
  warnings.warn(
/usr/lib/python3.12/site-packages/_pytest/pathlib.py:96: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-2e571536-f3a1-45a0-94f3-11c48867968c/popen-gw56
<class 'OSError'>: [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-2e571536-f3a1-45a0-94f3-11c48867968c/popen-gw56'
  warnings.warn(
/usr/lib/python3.12/site-packages/_pytest/pathlib.py:96: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-2e571536-f3a1-45a0-94f3-11c48867968c
<class 'OSError'>: [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-2e571536-f3a1-45a0-94f3-11c48867968c'
  warnings.warn(
/usr/lib/python3.12/site-packages/_pytest/pathlib.py:96: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-aa661432-6e5f-4efb-9fb3-916a18acaee3/popen-gw1/test_discovery_via_path_in_non0
<class 'OSError'>: [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-aa661432-6e5f-4efb-9fb3-916a18acaee3/popen-gw1/test_discovery_via_path_in_non0'
  warnings.warn(
/usr/lib/python3.12/site-packages/_pytest/pathlib.py:96: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-aa661432-6e5f-4efb-9fb3-916a18acaee3/popen-gw1
<class 'OSError'>: [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-aa661432-6e5f-4efb-9fb3-916a18acaee3/popen-gw1'
  warnings.warn(
/usr/lib/python3.12/site-packages/_pytest/pathlib.py:96: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-aa661432-6e5f-4efb-9fb3-916a18acaee3
<class 'OSError'>: [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-aa661432-6e5f-4efb-9fb3-916a18acaee3'
  warnings.warn(
/usr/lib/python3.12/site-packages/_pytest/pathlib.py:96: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-48c41e11-ef9f-4caf-b608-d9ae48b20bfe/popen-gw60/test_discovery_via_path_in_non0
<class 'OSError'>: [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-48c41e11-ef9f-4caf-b608-d9ae48b20bfe/popen-gw60/test_discovery_via_path_in_non0'
  warnings.warn(
/usr/lib/python3.12/site-packages/_pytest/pathlib.py:96: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-48c41e11-ef9f-4caf-b608-d9ae48b20bfe/popen-gw60
<class 'OSError'>: [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-48c41e11-ef9f-4caf-b608-d9ae48b20bfe/popen-gw60'
  warnings.warn(
/usr/lib/python3.12/site-packages/_pytest/pathlib.py:96: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-48c41e11-ef9f-4caf-b608-d9ae48b20bfe
<class 'OSError'>: [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-48c41e11-ef9f-4caf-b608-d9ae48b20bfe'
  warnings.warn(
/usr/lib/python3.12/site-packages/_pytest/pathlib.py:96: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-53260277-90cb-4093-bd10-a13132f0dbc2/popen-gw3/test_discovery_via_path_in_non0
<class 'OSError'>: [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-53260277-90cb-4093-bd10-a13132f0dbc2/popen-gw3/test_discovery_via_path_in_non0'
  warnings.warn(
/usr/lib/python3.12/site-packages/_pytest/pathlib.py:96: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-53260277-90cb-4093-bd10-a13132f0dbc2/popen-gw3
<class 'OSError'>: [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-53260277-90cb-4093-bd10-a13132f0dbc2/popen-gw3'
  warnings.warn(
/usr/lib/python3.12/site-packages/_pytest/pathlib.py:96: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-53260277-90cb-4093-bd10-a13132f0dbc2
<class 'OSError'>: [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-53260277-90cb-4093-bd10-a13132f0dbc2'
  warnings.warn(
>>> py3-bioframe: Entering fakeroot...
>>> py3-bioframe-doc*: Running split function doc...
'usr/share/doc' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-doc/usr/share/doc'
>>> py3-bioframe-doc*: Preparing subpackage py3-bioframe-doc...
>>> py3-bioframe-doc*: Running postcheck for py3-bioframe-doc
>>> py3-bioframe-pyc*: Running split function pyc...
'usr/lib/python3.12/site-packages/bioframe/core/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/core/__pycache__'
'usr/lib/python3.12/site-packages/bioframe/io/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/io/__pycache__'
'usr/lib/python3.12/site-packages/bioframe/sandbox/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/sandbox/__pycache__'
'usr/lib/python3.12/site-packages/bioframe/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/__pycache__'
>>> py3-bioframe-pyc*: Preparing subpackage py3-bioframe-pyc...
>>> py3-bioframe-pyc*: Running postcheck for py3-bioframe-pyc
>>> py3-bioframe*: Running postcheck for py3-bioframe
>>> py3-bioframe*: Preparing package py3-bioframe...
>>> py3-bioframe-doc*: Tracing dependencies...
>>> py3-bioframe-doc*: Package size: 7.7 KB
>>> py3-bioframe-doc*: Compressing data...
>>> py3-bioframe-doc*: Create checksum...
>>> py3-bioframe-doc*: Create py3-bioframe-doc-0.8.0-r0.apk
>>> py3-bioframe-pyc*: Tracing dependencies...
	py3-matplotlib
	py3-numpy
	py3-pandas
	py3-yaml
	py3-requests
	py3-typing-extensions
	py3-setuptools
	python3~3.12
>>> py3-bioframe-pyc*: Package size: 263.5 KB
>>> py3-bioframe-pyc*: Compressing data...
>>> py3-bioframe-pyc*: Create checksum...
>>> py3-bioframe-pyc*: Create py3-bioframe-pyc-0.8.0-r0.apk
>>> py3-bioframe*: Tracing dependencies...
	py3-matplotlib
	py3-numpy
	py3-pandas
	py3-yaml
	py3-requests
	py3-typing-extensions
	py3-setuptools
	python3~3.12
>>> py3-bioframe*: Package size: 238.5 KB
>>> py3-bioframe*: Compressing data...
>>> py3-bioframe*: Create checksum...
>>> py3-bioframe*: Create py3-bioframe-0.8.0-r0.apk
>>> py3-bioframe: Build complete at Thu, 10 Apr 2025 13:08:02 +0000 elapsed time 0h 0m 27s
>>> py3-bioframe: Cleaning up srcdir
>>> py3-bioframe: Cleaning up pkgdir
>>> py3-bioframe: Uninstalling dependencies...
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Executing busybox-1.37.0-r15.trigger
OK: 275 MiB in 103 packages
>>> py3-bioframe: Updating the community/ppc64le repository index...
>>> py3-bioframe: Signing the index...