>>> py3-bioframe: Building community/py3-bioframe 0.7.2-r1 (using abuild 3.14.1-r1) started Wed, 13 Nov 2024 04:12:47 +0000 >>> py3-bioframe: Validating /home/buildozer/aports/community/py3-bioframe/APKBUILD... >>> py3-bioframe: Analyzing dependencies... >>> py3-bioframe: Installing for build: build-base py3-matplotlib py3-numpy py3-pandas py3-yaml py3-requests py3-typing-extensions py3-setuptools py3-gpep517 py3-hatchling py3-wheel py3-pytest-xdist (1/105) Installing openblas (0.3.28-r0) (2/105) Installing libbz2 (1.0.8-r6) (3/105) Installing libffi (3.4.6-r0) (4/105) Installing gdbm (1.24-r0) (5/105) Installing xz-libs (5.6.3-r0) (6/105) Installing mpdecimal (4.0.0-r0) (7/105) Installing libpanelw (6.5_p20241006-r3) (8/105) Installing sqlite-libs (3.47.0-r0) (9/105) Installing python3 (3.12.7-r1) (10/105) Installing python3-pycache-pyc0 (3.12.7-r1) (11/105) Installing pyc (3.12.7-r1) (12/105) Installing py3-contourpy-pyc (1.3.0-r0) (13/105) Installing py3-cycler (0.12.1-r1) (14/105) Installing py3-cycler-pyc (0.12.1-r1) (15/105) Installing py3-six (1.16.0-r9) (16/105) Installing py3-six-pyc (1.16.0-r9) (17/105) Installing py3-dateutil (2.9.0-r1) (18/105) Installing py3-dateutil-pyc (2.9.0-r1) (19/105) Installing py3-fonttools (4.54.1-r0) (20/105) Installing py3-fonttools-pyc (4.54.1-r0) (21/105) Installing py3-kiwisolver (1.4.5-r1) (22/105) Installing py3-kiwisolver-pyc (1.4.5-r1) (23/105) Installing py3-matplotlib-fonts (3.9.1-r0) (24/105) Installing py3-matplotlib-data (3.9.1-r0) (25/105) Installing py3-parsing (3.1.4-r0) (26/105) Installing py3-parsing-pyc (3.1.4-r0) (27/105) Installing py3-packaging (24.2-r0) (28/105) Installing py3-packaging-pyc (24.2-r0) (29/105) Installing libpng (1.6.44-r0) (30/105) Installing freetype (2.13.3-r0) (31/105) Installing libimagequant (4.2.2-r0) (32/105) Installing libjpeg-turbo (3.0.4-r0) (33/105) Installing lcms2 (2.16-r0) (34/105) Installing openjpeg (2.5.2-r0) (35/105) Installing libsharpyuv (1.4.0-r0) (36/105) Installing libwebp (1.4.0-r0) (37/105) Installing tiff (4.7.0-r0) (38/105) Installing libwebpdemux (1.4.0-r0) (39/105) Installing libwebpmux (1.4.0-r0) (40/105) Installing libxau (1.0.11-r4) (41/105) Installing libmd (1.1.0-r0) (42/105) Installing libbsd (0.12.2-r0) (43/105) Installing libxdmcp (1.1.5-r1) (44/105) Installing libxcb (1.16.1-r0) (45/105) Installing py3-pillow (11.0.0-r0) (46/105) Installing py3-pillow-pyc (11.0.0-r0) (47/105) Installing py3-matplotlib-pyc (3.9.1-r0) (48/105) Installing py3-numpy-pyc (2.1.2-r0) (49/105) Installing python3-pyc (3.12.7-r1) (50/105) Installing py3-numpy (2.1.2-r0) (51/105) Installing py3-contourpy (1.3.0-r0) (52/105) Installing qhull (2020.2-r3) (53/105) Installing py3-matplotlib (3.9.1-r0) (54/105) Installing py3-tz (2024.2-r0) (55/105) Installing py3-tz-pyc (2024.2-r0) (56/105) Installing py3-attrs (24.2.0-r0) (57/105) Installing py3-attrs-pyc (24.2.0-r0) (58/105) Installing py3-tzdata (2024.2-r0) (59/105) Installing py3-tzdata-pyc (2024.2-r0) (60/105) Installing py3-pandas (2.2.3-r0) (61/105) Installing py3-pandas-pyc (2.2.3-r0) (62/105) Installing yaml (0.2.5-r2) (63/105) Installing py3-yaml (6.0.2-r0) (64/105) Installing py3-yaml-pyc (6.0.2-r0) (65/105) Installing py3-certifi (2024.8.30-r0) (66/105) Installing py3-certifi-pyc (2024.8.30-r0) (67/105) Installing py3-charset-normalizer (3.4.0-r0) (68/105) Installing py3-charset-normalizer-pyc (3.4.0-r0) (69/105) Installing py3-idna (3.10-r0) (70/105) Installing py3-idna-pyc (3.10-r0) (71/105) Installing py3-urllib3 (1.26.20-r0) (72/105) Installing py3-urllib3-pyc (1.26.20-r0) (73/105) Installing py3-requests (2.32.3-r0) (74/105) Installing py3-requests-pyc (2.32.3-r0) (75/105) Installing py3-typing-extensions (4.12.2-r0) (76/105) Installing py3-typing-extensions-pyc (4.12.2-r0) (77/105) Installing py3-setuptools (70.3.0-r0) (78/105) Installing py3-setuptools-pyc (70.3.0-r0) (79/105) Installing py3-installer (0.7.0-r2) (80/105) Installing py3-installer-pyc (0.7.0-r2) (81/105) Installing py3-gpep517 (16-r0) (82/105) Installing py3-gpep517-pyc (16-r0) (83/105) Installing py3-editables (0.5-r2) (84/105) Installing py3-editables-pyc (0.5-r2) (85/105) Installing py3-pathspec (0.12.1-r2) (86/105) Installing py3-pathspec-pyc (0.12.1-r2) (87/105) Installing py3-pluggy (1.5.0-r0) (88/105) Installing py3-pluggy-pyc (1.5.0-r0) (89/105) Installing py3-trove-classifiers (2024.10.21.16-r0) (90/105) Installing py3-trove-classifiers-pyc (2024.10.21.16-r0) (91/105) Installing py3-hatchling (1.26.1-r0) (92/105) Installing py3-hatchling-pyc (1.26.1-r0) (93/105) Installing py3-wheel (0.43.0-r0) (94/105) Installing py3-wheel-pyc (0.43.0-r0) (95/105) Installing py3-execnet (2.1.1-r0) (96/105) Installing py3-execnet-pyc (2.1.1-r0) (97/105) Installing py3-iniconfig (2.0.0-r1) (98/105) Installing py3-iniconfig-pyc (2.0.0-r1) (99/105) Installing py3-py (1.11.0-r4) (100/105) Installing py3-py-pyc (1.11.0-r4) (101/105) Installing py3-pytest (8.3.3-r0) (102/105) Installing py3-pytest-pyc (8.3.3-r0) (103/105) Installing py3-pytest-xdist (3.6.1-r0) (104/105) Installing py3-pytest-xdist-pyc (3.6.1-r0) (105/105) Installing .makedepends-py3-bioframe (20241113.041250) Executing busybox-1.37.0-r6.trigger OK: 518 MiB in 205 packages >>> py3-bioframe: Cleaning up srcdir >>> py3-bioframe: Cleaning up pkgdir >>> py3-bioframe: Cleaning up tmpdir >>> py3-bioframe: Fetching https://distfiles.alpinelinux.org/distfiles/edge/bioframe-0.7.2.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 950k 100 950k 0 0 4200k 0 --:--:-- --:--:-- --:--:-- 4223k >>> py3-bioframe: Fetching https://distfiles.alpinelinux.org/distfiles/edge/bioframe-0.7.2.tar.gz >>> py3-bioframe: Checking sha512sums... bioframe-0.7.2.tar.gz: OK >>> py3-bioframe: Unpacking /var/cache/distfiles/edge/bioframe-0.7.2.tar.gz... 2024-11-13 04:12:57,216 gpep517 INFO Building wheel via backend hatchling.build 2024-11-13 04:12:57,572 gpep517 INFO The backend produced .dist/bioframe-0.7.2-py2.py3-none-any.whl bioframe-0.7.2-py2.py3-none-any.whl ============================= test session starts ============================== platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 rootdir: /home/buildozer/aports/community/py3-bioframe/src/bioframe-0.7.2 configfile: pyproject.toml plugins: xdist-3.6.1 created: 64/64 workers 64 workers [68 items] s...s...........s................................................... [100%] ======================== 65 passed, 3 skipped in 44.72s ======================== /usr/lib/python3.12/site-packages/_pytest/pathlib.py:91: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-be16eebe-9c9e-4af0-a943-d13dfd599fa4/popen-gw60/test_discovery_via_path_in_non0 : [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-be16eebe-9c9e-4af0-a943-d13dfd599fa4/popen-gw60/test_discovery_via_path_in_non0' warnings.warn( /usr/lib/python3.12/site-packages/_pytest/pathlib.py:91: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-be16eebe-9c9e-4af0-a943-d13dfd599fa4/popen-gw60 : [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-be16eebe-9c9e-4af0-a943-d13dfd599fa4/popen-gw60' warnings.warn( /usr/lib/python3.12/site-packages/_pytest/pathlib.py:91: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-be16eebe-9c9e-4af0-a943-d13dfd599fa4 : [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-be16eebe-9c9e-4af0-a943-d13dfd599fa4' warnings.warn( /usr/lib/python3.12/site-packages/_pytest/pathlib.py:91: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-1f67140d-e980-479a-a459-92f56549e568/popen-gw61/test_discovery_via_path_in_non0 : [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-1f67140d-e980-479a-a459-92f56549e568/popen-gw61/test_discovery_via_path_in_non0' warnings.warn( /usr/lib/python3.12/site-packages/_pytest/pathlib.py:91: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-1f67140d-e980-479a-a459-92f56549e568/popen-gw61 : [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-1f67140d-e980-479a-a459-92f56549e568/popen-gw61' warnings.warn( /usr/lib/python3.12/site-packages/_pytest/pathlib.py:91: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-1f67140d-e980-479a-a459-92f56549e568 : [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-1f67140d-e980-479a-a459-92f56549e568' warnings.warn( /usr/lib/python3.12/site-packages/_pytest/pathlib.py:91: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-134aae5c-1e1f-4071-80d0-0a4c1e78e634/test_validate_zimfile_creatabl3 : [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-134aae5c-1e1f-4071-80d0-0a4c1e78e634/test_validate_zimfile_creatabl3' warnings.warn( /usr/lib/python3.12/site-packages/_pytest/pathlib.py:91: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-134aae5c-1e1f-4071-80d0-0a4c1e78e634 : [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-134aae5c-1e1f-4071-80d0-0a4c1e78e634' warnings.warn( >>> py3-bioframe: Entering fakeroot... >>> py3-bioframe-doc*: Running split function doc... 'usr/share/doc' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-doc/usr/share/doc' >>> py3-bioframe-doc*: Preparing subpackage py3-bioframe-doc... >>> py3-bioframe-doc*: Running postcheck for py3-bioframe-doc >>> py3-bioframe-pyc*: Running split function pyc... 'usr/lib/python3.12/site-packages/bioframe/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/__pycache__' 'usr/lib/python3.12/site-packages/bioframe/io/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/io/__pycache__' 'usr/lib/python3.12/site-packages/bioframe/core/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/core/__pycache__' 'usr/lib/python3.12/site-packages/bioframe/sandbox/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/sandbox/__pycache__' >>> py3-bioframe-pyc*: Preparing subpackage py3-bioframe-pyc... >>> py3-bioframe-pyc*: Running postcheck for py3-bioframe-pyc >>> py3-bioframe*: Running postcheck for py3-bioframe >>> py3-bioframe*: Preparing package py3-bioframe... >>> py3-bioframe-doc*: Tracing dependencies... >>> py3-bioframe-doc*: Package size: 7.7 KB >>> py3-bioframe-doc*: Compressing data... >>> py3-bioframe-doc*: Create checksum... >>> py3-bioframe-doc*: Create py3-bioframe-doc-0.7.2-r1.apk >>> py3-bioframe-pyc*: Tracing dependencies... py3-matplotlib py3-numpy py3-pandas py3-yaml py3-requests py3-typing-extensions py3-setuptools python3~3.12 >>> py3-bioframe-pyc*: Package size: 254.7 KB >>> py3-bioframe-pyc*: Compressing data... >>> py3-bioframe-pyc*: Create checksum... >>> py3-bioframe-pyc*: Create py3-bioframe-pyc-0.7.2-r1.apk >>> py3-bioframe*: Tracing dependencies... py3-matplotlib py3-numpy py3-pandas py3-yaml py3-requests py3-typing-extensions py3-setuptools python3~3.12 >>> py3-bioframe*: Package size: 231.7 KB >>> py3-bioframe*: Compressing data... >>> py3-bioframe*: Create checksum... >>> py3-bioframe*: Create py3-bioframe-0.7.2-r1.apk >>> py3-bioframe: Build complete at Wed, 13 Nov 2024 04:13:47 +0000 elapsed time 0h 1m 0s >>> py3-bioframe: Cleaning up srcdir >>> py3-bioframe: Cleaning up pkgdir >>> py3-bioframe: Uninstalling dependencies... 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