>>> py3-rpy2: Building community/py3-rpy2 3.5.16-r3 (using abuild 3.14.1-r3) started Thu, 21 Nov 2024 21:09:35 +0000 >>> py3-rpy2: Validating /home/buildozer/aports/community/py3-rpy2/APKBUILD... >>> py3-rpy2: Analyzing dependencies... >>> py3-rpy2: Installing for build: build-base py3-cffi py3-numpy py3-tz py3-tzlocal py3-jinja2 R py3-gpep517 py3-setuptools py3-wheel python3-dev R-dev libdeflate-dev py3-pytest (1/128) Installing libffi (3.4.6-r0) (2/128) Installing gdbm (1.24-r0) (3/128) Installing mpdecimal (4.0.0-r0) (4/128) Installing libpanelw (6.5_p20241006-r3) (5/128) Installing sqlite-libs (3.47.0-r0) (6/128) Installing python3 (3.12.7-r1) (7/128) Installing python3-pycache-pyc0 (3.12.7-r1) (8/128) Installing pyc (3.12.7-r1) (9/128) Installing py3-cparser-pyc (2.22-r1) (10/128) Installing py3-cffi-pyc (1.17.1-r1) (11/128) Installing python3-pyc (3.12.7-r1) (12/128) Installing py3-cparser (2.22-r1) (13/128) Installing py3-cffi (1.17.1-r1) (14/128) Installing libquadmath (14.2.0-r4) (15/128) Installing libgfortran (14.2.0-r4) (16/128) Installing openblas (0.3.28-r0) (17/128) Installing py3-numpy (2.1.3-r0) (18/128) Installing py3-numpy-pyc (2.1.3-r0) (19/128) Installing py3-tz (2024.2-r0) (20/128) Installing py3-tz-pyc (2024.2-r0) (21/128) Installing py3-attrs (24.2.0-r0) (22/128) Installing py3-attrs-pyc (24.2.0-r0) (23/128) Installing py3-tzdata (2024.2-r0) (24/128) Installing py3-tzdata-pyc (2024.2-r0) (25/128) Installing py3-tzlocal (5.2-r1) (26/128) Installing py3-tzlocal-pyc (5.2-r1) (27/128) Installing py3-markupsafe (3.0.2-r0) (28/128) Installing py3-markupsafe-pyc (3.0.2-r0) (29/128) Installing py3-jinja2 (3.1.4-r0) (30/128) Installing py3-jinja2-pyc (3.1.4-r0) (31/128) Installing R-mathlib (4.4.2-r0) (32/128) Installing libxau (1.0.11-r4) (33/128) Installing libmd (1.1.0-r0) (34/128) Installing libbsd (0.12.2-r0) (35/128) Installing libxdmcp (1.1.5-r1) (36/128) Installing libxcb (1.16.1-r0) (37/128) Installing libx11 (1.8.10-r0) (38/128) Installing libxext (1.3.6-r2) (39/128) Installing libice (1.1.1-r6) (40/128) Installing libuuid (2.40.2-r4) (41/128) Installing libsm (1.2.4-r4) (42/128) Installing libxt (1.3.0-r5) (43/128) Installing libxmu (1.2.1-r0) (44/128) Installing libxrender (0.9.11-r5) (45/128) Installing libpng (1.6.44-r0) (46/128) Installing freetype (2.13.3-r0) (47/128) Installing fontconfig (2.15.0-r1) (48/128) Installing pixman (0.43.4-r1) (49/128) Installing cairo (1.18.2-r1) (50/128) Installing libdeflate (1.22-r0) (51/128) Installing libintl (0.22.5-r0) (52/128) Installing libeconf (0.6.3-r0) (53/128) Installing libblkid (2.40.2-r4) (54/128) Installing libmount (2.40.2-r4) (55/128) Installing glib (2.82.2-r0) (56/128) Installing icu-data-en (74.2-r0) Executing icu-data-en-74.2-r0.post-install * * If you need ICU with non-English locales and legacy charset support, install * package icu-data-full. * (57/128) Installing icu-libs (74.2-r0) (58/128) Installing libjpeg-turbo (3.0.4-r0) (59/128) Installing libxft (2.3.8-r3) (60/128) Installing fribidi (1.0.16-r0) (61/128) Installing graphite2 (1.3.14-r6) (62/128) Installing harfbuzz (9.0.0-r1) (63/128) Installing pango (1.54.0-r1) (64/128) Installing tzdata (2024b-r1) (65/128) Installing tcl (8.6.15-r0) (66/128) Installing libsharpyuv (1.4.0-r0) (67/128) Installing libwebp (1.4.0-r0) (68/128) Installing tiff (4.7.0-r0) (69/128) Installing tk (8.6.15-r0) (70/128) Installing R (4.4.2-r0) Executing R-4.4.2-r0.post-install * * If you want to install R packages from CRAN that contains native extensions, * then you must also install R-dev. * * To avoid warnings about R.css when installing R extensions also install R-doc. * (71/128) Installing py3-installer (0.7.0-r2) (72/128) Installing py3-installer-pyc (0.7.0-r2) (73/128) Installing py3-gpep517 (16-r0) (74/128) Installing py3-gpep517-pyc (16-r0) (75/128) Installing py3-parsing (3.1.4-r0) (76/128) Installing py3-parsing-pyc (3.1.4-r0) (77/128) Installing py3-packaging (24.2-r0) (78/128) Installing py3-packaging-pyc (24.2-r0) (79/128) Installing py3-setuptools (70.3.0-r0) (80/128) Installing py3-setuptools-pyc (70.3.0-r0) (81/128) Installing py3-wheel (0.43.0-r0) (82/128) Installing py3-wheel-pyc (0.43.0-r0) (83/128) Installing python3-dev (3.12.7-r1) (84/128) Installing bzip2-dev (1.0.8-r6) (85/128) Installing brotli (1.1.0-r2) (86/128) Installing brotli-dev (1.1.0-r2) (87/128) Installing c-ares-dev (1.34.3-r0) (88/128) Installing libidn2-dev (2.3.7-r0) (89/128) Installing libpsl-utils (0.21.5-r3) (90/128) Installing libpsl-dev (0.21.5-r3) (91/128) Installing nghttp2-dev (1.64.0-r0) (92/128) Installing openssl-dev (3.3.2-r4) (93/128) Installing zlib-dev (1.3.1-r2) (94/128) Installing zstd (1.5.6-r1) (95/128) Installing zstd-dev (1.5.6-r1) (96/128) Installing curl-dev (8.11.0-r2) (97/128) Installing gfortran (14.2.0-r4) (98/128) Installing icu (74.2-r0) (99/128) Installing icu-dev (74.2-r0) (100/128) Installing libdeflate-dev (1.22-r0) (101/128) Installing libpng-dev (1.6.44-r0) (102/128) Installing liblapack (0.3.28-r0) (103/128) Installing liblapacke (0.3.28-r0) (104/128) Installing openblas-ilp64 (0.3.28-r0) (105/128) Installing openblas-dev (0.3.28-r0) (106/128) Installing bsd-compat-headers (0.7.2-r6) (107/128) Installing libformw (6.5_p20241006-r3) (108/128) Installing libmenuw (6.5_p20241006-r3) (109/128) Installing libncurses++ (6.5_p20241006-r3) (110/128) Installing ncurses-dev (6.5_p20241006-r3) (111/128) Installing libedit-dev (20240808.3.1-r0) (112/128) Installing libpcre2-16 (10.43-r0) (113/128) Installing libpcre2-32 (10.43-r0) (114/128) Installing pcre2-dev (10.43-r0) (115/128) Installing libhistory (8.2.13-r0) (116/128) Installing readline-dev (8.2.13-r0) (117/128) Installing xz (5.6.3-r0) (118/128) Installing xz-dev (5.6.3-r0) (119/128) Installing R-dev (4.4.2-r0) (120/128) Installing py3-iniconfig (2.0.0-r1) (121/128) Installing py3-iniconfig-pyc (2.0.0-r1) (122/128) Installing py3-pluggy (1.5.0-r0) (123/128) Installing py3-pluggy-pyc (1.5.0-r0) (124/128) Installing py3-py (1.11.0-r4) (125/128) Installing py3-py-pyc (1.11.0-r4) (126/128) Installing py3-pytest (8.3.3-r0) (127/128) Installing py3-pytest-pyc (8.3.3-r0) (128/128) Installing .makedepends-py3-rpy2 (20241121.210936) Executing busybox-1.37.0-r8.trigger Executing glib-2.82.2-r0.trigger OK: 788 MiB in 239 packages >>> py3-rpy2: Cleaning up srcdir >>> py3-rpy2: Cleaning up pkgdir >>> py3-rpy2: Cleaning up tmpdir >>> py3-rpy2: Fetching https://distfiles.alpinelinux.org/distfiles/edge/py3-rpy2-3.5.16.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 curl: (22) The requested URL returned error: 404 >>> py3-rpy2: Fetching py3-rpy2-3.5.16.tar.gz::https://pypi.io/packages/source/r/rpy2/rpy2-3.5.16.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 122 100 122 0 0 1854 0 --:--:-- --:--:-- --:--:-- 1876 100 269 100 269 0 0 1313 0 --:--:-- --:--:-- --:--:-- 1313 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 214k 100 214k 0 0 853k 0 --:--:-- --:--:-- --:--:-- 853k >>> py3-rpy2: Fetching https://distfiles.alpinelinux.org/distfiles/edge/py3-rpy2-3.5.16.tar.gz >>> py3-rpy2: Checking sha512sums... py3-rpy2-3.5.16.tar.gz: OK tests-numpy2.patch: OK >>> py3-rpy2: Unpacking /var/cache/distfiles/edge/py3-rpy2-3.5.16.tar.gz... >>> py3-rpy2: tests-numpy2.patch patching file rpy2/tests/robjects/test_pandas_conversions.py patching file rpy2/tests/robjects/test_conversion_numpy.py 2024-11-21 21:09:40,110 gpep517 INFO Building wheel via backend setuptools.build_meta 2024-11-21 21:09:40,137 situation INFO R home found: /usr/lib/R 2024-11-21 21:09:40,137 situation INFO cffi mode is CFFI_MODE.ANY 2024-11-21 21:09:40,138 situation INFO R exec path: /usr/lib/R/bin/R 2024-11-21 21:09:40,162 situation INFO R exec path: /usr/lib/R/bin/R 2024-11-21 21:09:40,189 root INFO creating /tmp/tmp_pw_r_1yyckr9l/tmp 2024-11-21 21:09:40,189 root INFO creating /tmp/tmp_pw_r_1yyckr9l/tmp/tmp_pw_r_1yyckr9l 2024-11-21 21:09:40,189 root INFO gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O3 -Wall -Os -fstack-clash-protection -Wformat -Werror=format-security -fno-plt -fPIC -I/usr/include/R -c /tmp/tmp_pw_r_1yyckr9l/test_pw_r.c -o /tmp/tmp_pw_r_1yyckr9l/tmp/tmp_pw_r_1yyckr9l/test_pw_r.o 2024-11-21 21:09:40,225 root INFO gcc /tmp/tmp_pw_r_1yyckr9l/tmp/tmp_pw_r_1yyckr9l/test_pw_r.o -L/usr/lib/R/lib -lR -lpcre2-8 -ldeflate -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n -o /tmp/tmp_pw_r_1yyckr9l/test_pw_r 2024-11-21 21:09:40,264 situation INFO cffi mode is CFFI_MODE.ANY 2024-11-21 21:09:40,333 situation INFO R home found: /usr/lib/R 2024-11-21 21:09:40,333 situation INFO R exec path: /usr/lib/R/bin/R 2024-11-21 21:09:40,356 situation INFO R exec path: /usr/lib/R/bin/R 2024-11-21 21:09:40,381 situation INFO R exec path: /usr/lib/R/bin/R 2024-11-21 21:09:40,403 situation INFO R exec path: /usr/lib/R/bin/R 2024-11-21 21:09:40,495 situation INFO cffi mode is CFFI_MODE.ANY 2024-11-21 21:09:40,542 situation INFO R home found: /usr/lib/R 2024-11-21 21:09:40,542 situation INFO R exec path: /usr/lib/R/bin/R 2024-11-21 21:09:40,566 situation INFO R exec path: /usr/lib/R/bin/R 2024-11-21 21:09:40,592 situation INFO R exec path: /usr/lib/R/bin/R 2024-11-21 21:09:40,613 situation INFO R exec path: /usr/lib/R/bin/R 2024-11-21 21:09:40,786 root INFO running bdist_wheel 2024-11-21 21:09:40,792 root INFO running build 2024-11-21 21:09:40,792 root INFO running build_py 2024-11-21 21:09:40,792 root WARNING file _rinterface_cffi_abi.py (for module _rinterface_cffi_abi) not found 2024-11-21 21:09:40,793 root INFO creating build 2024-11-21 21:09:40,793 root INFO creating build/lib.linux-x86_64-cpython-312 2024-11-21 21:09:40,793 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2 2024-11-21 21:09:40,793 root INFO copying rpy2/rinterface.py -> build/lib.linux-x86_64-cpython-312/rpy2 2024-11-21 21:09:40,793 root INFO copying rpy2/situation.py -> build/lib.linux-x86_64-cpython-312/rpy2 2024-11-21 21:09:40,793 root INFO copying rpy2/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2 2024-11-21 21:09:40,794 root INFO copying rpy2/_rinterface_cffi_build.py -> build/lib.linux-x86_64-cpython-312/rpy2 2024-11-21 21:09:40,794 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/rlike 2024-11-21 21:09:40,794 root INFO copying rpy2/rlike/indexing.py -> build/lib.linux-x86_64-cpython-312/rpy2/rlike 2024-11-21 21:09:40,794 root INFO copying rpy2/rlike/functional.py -> build/lib.linux-x86_64-cpython-312/rpy2/rlike 2024-11-21 21:09:40,794 root INFO copying rpy2/rlike/container.py -> build/lib.linux-x86_64-cpython-312/rpy2/rlike 2024-11-21 21:09:40,794 root INFO copying rpy2/rlike/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/rlike 2024-11-21 21:09:40,795 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,795 root INFO copying rpy2/rinterface_lib/_rinterface_capi.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,795 root INFO copying rpy2/rinterface_lib/embedded.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,795 root INFO copying rpy2/rinterface_lib/embedded_mswin.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,795 root INFO copying rpy2/rinterface_lib/conversion.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,795 root INFO copying rpy2/rinterface_lib/openrlib.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,796 root INFO copying rpy2/rinterface_lib/callbacks.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,796 root INFO copying rpy2/rinterface_lib/ffi_proxy.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,796 root INFO copying rpy2/rinterface_lib/sexp.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,796 root INFO copying rpy2/rinterface_lib/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,796 root INFO copying rpy2/rinterface_lib/na_values.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,796 root INFO copying rpy2/rinterface_lib/memorymanagement.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,797 root INFO copying rpy2/rinterface_lib/bufferprotocol.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,797 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/robjects 2024-11-21 21:09:40,797 root INFO copying rpy2/robjects/vectors.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2024-11-21 21:09:40,797 root INFO copying rpy2/robjects/pandas2ri.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2024-11-21 21:09:40,797 root INFO copying rpy2/robjects/robject.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2024-11-21 21:09:40,798 root INFO copying rpy2/robjects/packages_utils.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2024-11-21 21:09:40,798 root INFO copying rpy2/robjects/conversion.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2024-11-21 21:09:40,798 root INFO copying rpy2/robjects/help.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2024-11-21 21:09:40,798 root INFO copying rpy2/robjects/methods.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2024-11-21 21:09:40,798 root INFO copying rpy2/robjects/constants.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2024-11-21 21:09:40,798 root INFO copying rpy2/robjects/packages.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2024-11-21 21:09:40,799 root INFO copying rpy2/robjects/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2024-11-21 21:09:40,799 root INFO copying rpy2/robjects/numpy2ri.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2024-11-21 21:09:40,799 root INFO copying rpy2/robjects/language.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2024-11-21 21:09:40,799 root INFO copying rpy2/robjects/functions.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2024-11-21 21:09:40,799 root INFO copying rpy2/robjects/environments.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2024-11-21 21:09:40,800 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib 2024-11-21 21:09:40,800 root INFO copying rpy2/robjects/lib/dbplyr.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib 2024-11-21 21:09:40,800 root INFO copying rpy2/robjects/lib/ggplot2.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib 2024-11-21 21:09:40,800 root INFO copying rpy2/robjects/lib/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib 2024-11-21 21:09:40,800 root INFO copying rpy2/robjects/lib/tidyr.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib 2024-11-21 21:09:40,800 root INFO copying rpy2/robjects/lib/dplyr.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib 2024-11-21 21:09:40,800 root INFO copying rpy2/robjects/lib/grid.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib 2024-11-21 21:09:40,801 root INFO copying rpy2/robjects/lib/grdevices.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib 2024-11-21 21:09:40,801 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/interactive 2024-11-21 21:09:40,801 root INFO copying rpy2/interactive/process_revents.py -> build/lib.linux-x86_64-cpython-312/rpy2/interactive 2024-11-21 21:09:40,801 root INFO copying rpy2/interactive/packages.py -> build/lib.linux-x86_64-cpython-312/rpy2/interactive 2024-11-21 21:09:40,801 root INFO copying rpy2/interactive/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/interactive 2024-11-21 21:09:40,802 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/ipython 2024-11-21 21:09:40,802 root INFO copying rpy2/ipython/rmagic.py -> build/lib.linux-x86_64-cpython-312/rpy2/ipython 2024-11-21 21:09:40,802 root INFO copying rpy2/ipython/ggplot.py -> build/lib.linux-x86_64-cpython-312/rpy2/ipython 2024-11-21 21:09:40,802 root INFO copying rpy2/ipython/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/ipython 2024-11-21 21:09:40,802 root INFO copying rpy2/ipython/html.py -> build/lib.linux-x86_64-cpython-312/rpy2/ipython 2024-11-21 21:09:40,802 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/tests 2024-11-21 21:09:40,803 root INFO copying rpy2/tests/utils.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests 2024-11-21 21:09:40,803 root INFO copying rpy2/tests/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests 2024-11-21 21:09:40,803 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,803 root INFO copying rpy2/tests/rinterface/test_vector_int.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,803 root INFO copying rpy2/tests/rinterface/test_noinitialization.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,803 root INFO copying rpy2/tests/rinterface/test_vector_list.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,804 root INFO copying rpy2/tests/rinterface/test_functions.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,804 root INFO copying rpy2/tests/rinterface/test_embedded_r.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,804 root INFO copying rpy2/tests/rinterface/test_environment.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,804 root INFO copying rpy2/tests/rinterface/test_sexp.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,804 root INFO copying rpy2/tests/rinterface/test_vector_str.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,804 root INFO copying rpy2/tests/rinterface/test_conversion.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,805 root INFO copying rpy2/tests/rinterface/test_vector_numpy.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,805 root INFO copying rpy2/tests/rinterface/test_bufferprotocol.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,805 root INFO copying rpy2/tests/rinterface/test_vector_byte.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,805 root INFO copying rpy2/tests/rinterface/test_symbol.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,805 root INFO copying rpy2/tests/rinterface/test_openrlib.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,805 root INFO copying rpy2/tests/rinterface/test_vector_lang.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,806 root INFO copying rpy2/tests/rinterface/test_na.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,806 root INFO copying rpy2/tests/rinterface/test_vector_pairlist.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,806 root INFO copying rpy2/tests/rinterface/test_callbacks.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,806 root INFO copying rpy2/tests/rinterface/test_memorymanagement.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,806 root INFO copying rpy2/tests/rinterface/test_vector_bool.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,806 root INFO copying rpy2/tests/rinterface/test_externalptr.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,806 root INFO copying rpy2/tests/rinterface/test_vector_float.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,807 root INFO copying rpy2/tests/rinterface/test_vector_complex.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,807 root INFO copying rpy2/tests/rinterface/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,807 root INFO copying rpy2/tests/rinterface/test_threading.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,807 root INFO copying rpy2/tests/rinterface/test_vectors.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,807 root INFO copying rpy2/tests/rinterface/test_endr.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2024-11-21 21:09:40,807 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/tests/rlike 2024-11-21 21:09:40,808 root INFO copying rpy2/tests/rlike/test_container.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rlike 2024-11-21 21:09:40,808 root INFO copying rpy2/tests/rlike/test_indexing.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rlike 2024-11-21 21:09:40,808 root INFO copying rpy2/tests/rlike/test_functional.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rlike 2024-11-21 21:09:40,808 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,808 root INFO copying rpy2/tests/robjects/test_function.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,808 root INFO copying rpy2/tests/robjects/test_environment.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,809 root INFO copying rpy2/tests/robjects/test_conversion_numpy.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,809 root INFO copying rpy2/tests/robjects/test_conversion.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,809 root INFO copying rpy2/tests/robjects/test_methods.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,809 root INFO copying rpy2/tests/robjects/test_vector.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,809 root INFO copying rpy2/tests/robjects/test_language.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,810 root INFO copying rpy2/tests/robjects/test_vector_factor.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,810 root INFO copying rpy2/tests/robjects/test_help.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,810 root INFO copying rpy2/tests/robjects/test_formula.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,810 root INFO copying rpy2/tests/robjects/test_dataframe.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,810 root INFO copying rpy2/tests/robjects/test_robjects.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,810 root INFO copying rpy2/tests/robjects/test_serialization.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,810 root INFO copying rpy2/tests/robjects/test_vector_extractdelegator.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,811 root INFO copying rpy2/tests/robjects/test_translated_function.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,811 root INFO copying rpy2/tests/robjects/test_pandas_conversions.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,811 root INFO copying rpy2/tests/robjects/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,811 root INFO copying rpy2/tests/robjects/test_packages.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,811 root INFO copying rpy2/tests/robjects/test_vector_datetime.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,811 root INFO copying rpy2/tests/robjects/test_rs4.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,812 root INFO copying rpy2/tests/robjects/test_array.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,812 root INFO copying rpy2/tests/robjects/test_packages_utils.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2024-11-21 21:09:40,812 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/tests/ipython 2024-11-21 21:09:40,812 root INFO copying rpy2/tests/ipython/test_ggplot.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/ipython 2024-11-21 21:09:40,812 root INFO copying rpy2/tests/ipython/test_rmagic.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/ipython 2024-11-21 21:09:40,812 root INFO copying rpy2/tests/ipython/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/ipython 2024-11-21 21:09:40,813 root INFO copying rpy2/tests/ipython/test_html.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/ipython 2024-11-21 21:09:40,813 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib 2024-11-21 21:09:40,813 root INFO copying rpy2/tests/robjects/lib/test_dplyr.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib 2024-11-21 21:09:40,813 root INFO copying rpy2/tests/robjects/lib/test_grdevices.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib 2024-11-21 21:09:40,813 root INFO copying rpy2/tests/robjects/lib/test_ggplot2.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib 2024-11-21 21:09:40,813 root INFO copying rpy2/tests/robjects/lib/test_grid.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib 2024-11-21 21:09:40,814 root INFO copying rpy2/tests/robjects/lib/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib 2024-11-21 21:09:40,814 root INFO copying rpy2/tests/robjects/lib/test_dbplyr.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib 2024-11-21 21:09:40,814 root INFO copying rpy2/tests/robjects/lib/test_tidyr.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib 2024-11-21 21:09:40,814 root INFO running egg_info 2024-11-21 21:09:40,816 root INFO writing rpy2.egg-info/PKG-INFO 2024-11-21 21:09:40,818 root INFO writing dependency_links to rpy2.egg-info/dependency_links.txt 2024-11-21 21:09:40,820 root INFO writing requirements to rpy2.egg-info/requires.txt 2024-11-21 21:09:40,820 root INFO writing top-level names to rpy2.egg-info/top_level.txt 2024-11-21 21:09:40,825 root INFO reading manifest file 'rpy2.egg-info/SOURCES.txt' 2024-11-21 21:09:40,826 root INFO reading manifest template 'MANIFEST.in' 2024-11-21 21:09:40,831 root WARNING warning: no files found matching 'README' anywhere in distribution 2024-11-21 21:09:40,831 root WARNING warning: no previously-included files matching '*patch*' found anywhere in distribution 2024-11-21 21:09:40,832 root WARNING warning: no previously-included files matching '*diff*' found anywhere in distribution 2024-11-21 21:09:40,832 root WARNING warning: no previously-included files matching '.hg' found anywhere in distribution 2024-11-21 21:09:40,832 root WARNING warning: no files found matching 'MANIFEST' 2024-11-21 21:09:40,832 root WARNING warning: no files found matching '_rinterface_cffi_build' 2024-11-21 21:09:40,832 root WARNING warning: no files found matching 'rpy/__init__.py' 2024-11-21 21:09:40,832 root WARNING warning: no files found matching 'rpy/situation.py' 2024-11-21 21:09:40,832 root WARNING warning: no files found matching '*.py' under directory 'rpy/robjects' 2024-11-21 21:09:40,832 root WARNING warning: no files found matching '*.py' under directory 'rpy/ipython' 2024-11-21 21:09:40,832 root WARNING warning: no files found matching '*.py' under directory 'rpy/interactive' 2024-11-21 21:09:40,832 root WARNING warning: no files found matching '*.py' under directory 'rpy/rlike' 2024-11-21 21:09:40,833 root WARNING no previously-included directories found matching 'dist' 2024-11-21 21:09:40,833 root WARNING warning: no files found matching 'doc/source/rpy2_logo.png' 2024-11-21 21:09:40,833 root INFO adding license file 'LICENSE' 2024-11-21 21:09:40,833 root INFO adding license file 'AUTHORS' 2024-11-21 21:09:40,835 root INFO writing manifest file 'rpy2.egg-info/SOURCES.txt' 2024-11-21 21:09:40,836 root INFO copying rpy2/rinterface_lib/R_API.h -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,837 root INFO copying rpy2/rinterface_lib/R_API_eventloop.h -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,837 root INFO copying rpy2/rinterface_lib/R_API_eventloop.c -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,837 root INFO copying rpy2/rinterface_lib/RPY2.h -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,837 root INFO copying rpy2/rinterface_lib/_bufferprotocol.c -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,837 root WARNING file _rinterface_cffi_abi.py (for module _rinterface_cffi_abi) not found 2024-11-21 21:09:40,839 root INFO generating cffi module 'build/lib.linux-x86_64-cpython-312/_rinterface_cffi_abi.py' 2024-11-21 21:09:40,846 root INFO running build_ext 2024-11-21 21:09:40,846 root INFO generating cffi module 'build/temp.linux-x86_64-cpython-312/_rinterface_cffi_api.c' 2024-11-21 21:09:40,846 root INFO creating build/temp.linux-x86_64-cpython-312 2024-11-21 21:09:40,859 root INFO building 'rpy2.rinterface_lib._bufferprotocol' extension 2024-11-21 21:09:40,859 root INFO creating build/temp.linux-x86_64-cpython-312/rpy2 2024-11-21 21:09:40,859 root INFO creating build/temp.linux-x86_64-cpython-312/rpy2/rinterface_lib 2024-11-21 21:09:40,859 root INFO gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O3 -Wall -Os -fstack-clash-protection -Wformat -Werror=format-security -fno-plt -fPIC -I/usr/include/python3.12 -c rpy2/rinterface_lib/_bufferprotocol.c -o build/temp.linux-x86_64-cpython-312/rpy2/rinterface_lib/_bufferprotocol.o 2024-11-21 21:09:40,999 root INFO gcc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security -fno-plt build/temp.linux-x86_64-cpython-312/rpy2/rinterface_lib/_bufferprotocol.o -L/usr/lib -o build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/_bufferprotocol.cpython-312-x86_64-linux-musl.so 2024-11-21 21:09:41,016 root INFO building '_rinterface_cffi_api' extension 2024-11-21 21:09:41,016 root INFO creating build/temp.linux-x86_64-cpython-312/build 2024-11-21 21:09:41,016 root INFO creating build/temp.linux-x86_64-cpython-312/build/temp.linux-x86_64-cpython-312 2024-11-21 21:09:41,016 root INFO gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O3 -Wall -Os -fstack-clash-protection -Wformat -Werror=format-security -fno-plt -fPIC -DRPY2_RLEN_LONG=True -DR_INTERFACE_PTRS=True -Irpy2/rinterface_lib/ -I/usr/include/python3.12 -c build/temp.linux-x86_64-cpython-312/_rinterface_cffi_api.c -o build/temp.linux-x86_64-cpython-312/build/temp.linux-x86_64-cpython-312/_rinterface_cffi_api.o -std=c99 2024-11-21 21:09:43,542 root INFO gcc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security -fno-plt build/temp.linux-x86_64-cpython-312/build/temp.linux-x86_64-cpython-312/_rinterface_cffi_api.o -L/usr/lib/R/lib -L/usr/lib -lR -lpcre2-8 -ldeflate -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n -lopenblas -o build/lib.linux-x86_64-cpython-312/_rinterface_cffi_api.abi3.so -Wl,--export-dynamic -fopenmp -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Wl,-rpath,/usr/lib/R/lib 2024-11-21 21:09:43,593 root INFO installing to build/bdist.linux-x86_64/wheel 2024-11-21 21:09:43,593 root INFO running install 2024-11-21 21:09:43,603 root INFO running install_lib 2024-11-21 21:09:43,605 root INFO creating build/bdist.linux-x86_64 2024-11-21 21:09:43,605 root INFO creating build/bdist.linux-x86_64/wheel 2024-11-21 21:09:43,606 root INFO creating build/bdist.linux-x86_64/wheel/rpy2 2024-11-21 21:09:43,606 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/tests 2024-11-21 21:09:43,606 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,606 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_int.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,606 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_noinitialization.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,607 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_list.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,607 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_functions.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,607 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_embedded_r.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,607 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_environment.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,607 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_sexp.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,607 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_str.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,608 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_conversion.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,608 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_numpy.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,608 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_bufferprotocol.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,608 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_byte.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,608 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_symbol.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,609 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_openrlib.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,609 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_lang.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,609 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_na.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,609 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_pairlist.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,609 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_callbacks.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,610 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_memorymanagement.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,610 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_bool.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,610 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_externalptr.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,610 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_float.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,610 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_complex.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,610 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/__init__.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,611 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_threading.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,611 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vectors.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,611 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_endr.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2024-11-21 21:09:43,611 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/tests/ipython 2024-11-21 21:09:43,611 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/ipython/test_ggplot.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/ipython 2024-11-21 21:09:43,611 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/ipython/test_rmagic.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/ipython 2024-11-21 21:09:43,612 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/ipython/__init__.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/ipython 2024-11-21 21:09:43,612 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/ipython/test_html.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/ipython 2024-11-21 21:09:43,612 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/tests/rlike 2024-11-21 21:09:43,612 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rlike/test_container.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rlike 2024-11-21 21:09:43,612 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rlike/test_indexing.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rlike 2024-11-21 21:09:43,613 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rlike/test_functional.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/rlike 2024-11-21 21:09:43,613 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/utils.py -> build/bdist.linux-x86_64/wheel/rpy2/tests 2024-11-21 21:09:43,613 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,613 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_function.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,613 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_environment.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,613 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_conversion_numpy.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,614 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/tests/robjects/lib 2024-11-21 21:09:43,614 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib/test_dplyr.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects/lib 2024-11-21 21:09:43,614 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib/test_grdevices.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects/lib 2024-11-21 21:09:43,614 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib/test_ggplot2.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects/lib 2024-11-21 21:09:43,614 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib/test_grid.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects/lib 2024-11-21 21:09:43,615 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib/__init__.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects/lib 2024-11-21 21:09:43,615 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib/test_dbplyr.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects/lib 2024-11-21 21:09:43,615 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib/test_tidyr.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects/lib 2024-11-21 21:09:43,615 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_conversion.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,615 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_methods.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,615 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_vector.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,616 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_language.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,616 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_vector_factor.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,616 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_help.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,616 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_formula.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,616 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_dataframe.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,617 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_robjects.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,617 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_serialization.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,617 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_vector_extractdelegator.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,617 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_translated_function.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,617 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_pandas_conversions.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,617 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/__init__.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,618 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_packages.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,618 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_vector_datetime.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,618 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_rs4.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,618 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_array.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,618 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_packages_utils.py -> build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2024-11-21 21:09:43,619 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/__init__.py -> build/bdist.linux-x86_64/wheel/rpy2/tests 2024-11-21 21:09:43,619 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/ipython 2024-11-21 21:09:43,619 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/ipython/rmagic.py -> build/bdist.linux-x86_64/wheel/rpy2/ipython 2024-11-21 21:09:43,619 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/ipython/ggplot.py -> build/bdist.linux-x86_64/wheel/rpy2/ipython 2024-11-21 21:09:43,619 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/ipython/__init__.py -> build/bdist.linux-x86_64/wheel/rpy2/ipython 2024-11-21 21:09:43,619 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/ipython/html.py -> build/bdist.linux-x86_64/wheel/rpy2/ipython 2024-11-21 21:09:43,620 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,620 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/R_API_eventloop.h -> build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,620 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/_rinterface_capi.py -> build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,620 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/R_API.h -> build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,620 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/embedded.py -> build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,621 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/embedded_mswin.py -> build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,621 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/conversion.py -> build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,621 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/RPY2.h -> build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,621 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/openrlib.py -> build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,621 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/callbacks.py -> build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,621 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/ffi_proxy.py -> build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,622 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/sexp.py -> build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,622 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/__init__.py -> build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,622 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/na_values.py -> build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,622 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/R_API_eventloop.c -> build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,622 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/memorymanagement.py -> build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,623 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/bufferprotocol.py -> build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,623 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/_bufferprotocol.c -> build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,623 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/_bufferprotocol.cpython-312-x86_64-linux-musl.so -> build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2024-11-21 21:09:43,623 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/rlike 2024-11-21 21:09:43,623 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rlike/indexing.py -> build/bdist.linux-x86_64/wheel/rpy2/rlike 2024-11-21 21:09:43,624 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rlike/functional.py -> build/bdist.linux-x86_64/wheel/rpy2/rlike 2024-11-21 21:09:43,624 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rlike/container.py -> build/bdist.linux-x86_64/wheel/rpy2/rlike 2024-11-21 21:09:43,624 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rlike/__init__.py -> build/bdist.linux-x86_64/wheel/rpy2/rlike 2024-11-21 21:09:43,624 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface.py -> build/bdist.linux-x86_64/wheel/rpy2 2024-11-21 21:09:43,624 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/robjects 2024-11-21 21:09:43,624 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/vectors.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects 2024-11-21 21:09:43,625 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/pandas2ri.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects 2024-11-21 21:09:43,625 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/robjects/lib 2024-11-21 21:09:43,625 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib/dbplyr.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects/lib 2024-11-21 21:09:43,625 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib/ggplot2.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects/lib 2024-11-21 21:09:43,626 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib/__init__.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects/lib 2024-11-21 21:09:43,626 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib/tidyr.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects/lib 2024-11-21 21:09:43,626 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib/dplyr.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects/lib 2024-11-21 21:09:43,626 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib/grid.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects/lib 2024-11-21 21:09:43,626 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib/grdevices.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects/lib 2024-11-21 21:09:43,626 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/robject.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects 2024-11-21 21:09:43,627 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/packages_utils.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects 2024-11-21 21:09:43,627 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/conversion.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects 2024-11-21 21:09:43,627 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/help.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects 2024-11-21 21:09:43,627 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/methods.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects 2024-11-21 21:09:43,627 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/constants.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects 2024-11-21 21:09:43,628 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/packages.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects 2024-11-21 21:09:43,628 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/__init__.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects 2024-11-21 21:09:43,628 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/numpy2ri.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects 2024-11-21 21:09:43,628 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/language.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects 2024-11-21 21:09:43,628 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/functions.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects 2024-11-21 21:09:43,628 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/environments.py -> build/bdist.linux-x86_64/wheel/rpy2/robjects 2024-11-21 21:09:43,629 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/situation.py -> build/bdist.linux-x86_64/wheel/rpy2 2024-11-21 21:09:43,629 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/interactive 2024-11-21 21:09:43,629 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/interactive/process_revents.py -> build/bdist.linux-x86_64/wheel/rpy2/interactive 2024-11-21 21:09:43,629 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/interactive/packages.py -> build/bdist.linux-x86_64/wheel/rpy2/interactive 2024-11-21 21:09:43,629 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/interactive/__init__.py -> build/bdist.linux-x86_64/wheel/rpy2/interactive 2024-11-21 21:09:43,630 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/__init__.py -> build/bdist.linux-x86_64/wheel/rpy2 2024-11-21 21:09:43,630 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/_rinterface_cffi_build.py -> build/bdist.linux-x86_64/wheel/rpy2 2024-11-21 21:09:43,630 root INFO copying build/lib.linux-x86_64-cpython-312/_rinterface_cffi_api.abi3.so -> build/bdist.linux-x86_64/wheel 2024-11-21 21:09:43,630 root INFO copying build/lib.linux-x86_64-cpython-312/_rinterface_cffi_abi.py -> build/bdist.linux-x86_64/wheel 2024-11-21 21:09:43,631 root INFO running install_egg_info 2024-11-21 21:09:43,633 root INFO Copying rpy2.egg-info to build/bdist.linux-x86_64/wheel/rpy2-3.5.16-py3.12.egg-info 2024-11-21 21:09:43,634 root INFO running install_scripts 2024-11-21 21:09:43,640 root INFO creating build/bdist.linux-x86_64/wheel/rpy2-3.5.16.dist-info/WHEEL 2024-11-21 21:09:43,641 wheel INFO creating '/home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.16/.dist/.tmp-62cts92x/rpy2-3.5.16-cp312-cp312-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it 2024-11-21 21:09:43,641 wheel INFO adding '_rinterface_cffi_abi.py' 2024-11-21 21:09:43,642 wheel INFO adding '_rinterface_cffi_api.abi3.so' 2024-11-21 21:09:43,643 wheel INFO adding 'rpy2/__init__.py' 2024-11-21 21:09:43,643 wheel INFO adding 'rpy2/_rinterface_cffi_build.py' 2024-11-21 21:09:43,644 wheel INFO adding 'rpy2/rinterface.py' 2024-11-21 21:09:43,644 wheel INFO adding 'rpy2/situation.py' 2024-11-21 21:09:43,644 wheel INFO adding 'rpy2/interactive/__init__.py' 2024-11-21 21:09:43,645 wheel INFO adding 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[ 12%] rpy2/tests/rinterface/test_environment.py::test_new PASSED [ 12%] rpy2/tests/rinterface/test_environment.py::test_globalenv PASSED [ 12%] rpy2/tests/rinterface/test_environment.py::test_getitem PASSED [ 12%] rpy2/tests/rinterface/test_environment.py::test_getitem_invalid PASSED [ 12%] rpy2/tests/rinterface/test_environment.py::test_setitem_invalid PASSED [ 12%] rpy2/tests/rinterface/test_environment.py::test_setitem_baseenv_invalid PASSED [ 12%] rpy2/tests/rinterface/test_environment.py::test_frame PASSED [ 12%] rpy2/tests/rinterface/test_environment.py::test_find_invalid_notstring PASSED [ 12%] rpy2/tests/rinterface/test_environment.py::test_find_invalid_empty PASSED [ 13%] rpy2/tests/rinterface/test_environment.py::test_find_invalid_notfound PASSED [ 13%] rpy2/tests/rinterface/test_environment.py::test_find_closure PASSED [ 13%] rpy2/tests/rinterface/test_environment.py::test_find_vector PASSED [ 13%] rpy2/tests/rinterface/test_environment.py::test_find_environment PASSED [ 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rpy2/tests/rinterface/test_functions.py::test_emptystringparams PASSED [ 16%] rpy2/tests/rinterface/test_functions.py::test_closureenv_isenv PASSED [ 16%] rpy2/tests/rinterface/test_functions.py::test_closureenv PASSED [ 16%] rpy2/tests/rinterface/test_functions.py::test_call_s4_setClass PASSED [ 16%] rpy2/tests/rinterface/test_functions.py::test_call_OrdDict PASSED [ 17%] rpy2/tests/rinterface/test_functions.py::test_call_OrdDictEnv PASSED [ 17%] rpy2/tests/rinterface/test_functions.py::test_error_in_call PASSED [ 17%] rpy2/tests/rinterface/test_functions.py::test_missing_arg PASSED [ 17%] rpy2/tests/rinterface/test_functions.py::test_scalar_convert_integer PASSED [ 17%] rpy2/tests/rinterface/test_functions.py::test_scalar_convert_double PASSED [ 17%] rpy2/tests/rinterface/test_functions.py::test_scalar_convert_boolean PASSED [ 17%] rpy2/tests/rinterface/test_functions.py::test_call_in_context[True-True] PASSED [ 17%] rpy2/tests/rinterface/test_functions.py::test_call_in_context[True-False] PASSED [ 17%] rpy2/tests/rinterface/test_functions.py::test_call_in_context[False-True] PASSED [ 18%] rpy2/tests/rinterface/test_functions.py::test_call_in_context[False-False] PASSED [ 18%] rpy2/tests/rinterface/test_functions.py::test_call_in_context_nested[True] PASSED [ 18%] rpy2/tests/rinterface/test_functions.py::test_call_in_context_nested[False] PASSED [ 18%] rpy2/tests/rinterface/test_memorymanagement.py::test_rmemory_manager PASSED [ 18%] rpy2/tests/rinterface/test_memorymanagement.py::test_rmemory_manager_unprotect PASSED [ 18%] rpy2/tests/rinterface/test_memorymanagement.py::test_rmemory_manager_unprotect_invalid PASSED [ 18%] rpy2/tests/rinterface/test_na.py::test_r_to_NAInteger PASSED [ 18%] rpy2/tests/rinterface/test_na.py::test_NAInteger_repr PASSED [ 19%] rpy2/tests/rinterface/test_na.py::test_NAInteger_str PASSED [ 19%] rpy2/tests/rinterface/test_na.py::test_NAInteger_to_r PASSED [ 19%] rpy2/tests/rinterface/test_na.py::test_bool_NAInteger PASSED [ 19%] rpy2/tests/rinterface/test_na.py::test_NAInteger_binaryfunc SKIPPED [ 19%] rpy2/tests/rinterface/test_na.py::test_NAInteger_in_vector PASSED [ 19%] rpy2/tests/rinterface/test_na.py::test_R_to_NALogical PASSED [ 19%] rpy2/tests/rinterface/test_na.py::test_NALogical_repr PASSED [ 19%] rpy2/tests/rinterface/test_na.py::test_NALogical_str PASSED [ 19%] rpy2/tests/rinterface/test_na.py::test_bool_NALogical PASSED [ 20%] rpy2/tests/rinterface/test_na.py::test_NALogical_to_r PASSED [ 20%] rpy2/tests/rinterface/test_na.py::test_NALogical_in_vector PASSED [ 20%] rpy2/tests/rinterface/test_na.py::test_R_to_NAReal PASSED [ 20%] rpy2/tests/rinterface/test_na.py::test_NAReal_to_r PASSED [ 20%] rpy2/tests/rinterface/test_na.py::test_bool_NAReal PASSED [ 20%] rpy2/tests/rinterface/test_na.py::test_NAReal_binaryfunc PASSED [ 20%] rpy2/tests/rinterface/test_na.py::test_NAReal_in_vector PASSED [ 20%] rpy2/tests/rinterface/test_na.py::test_NAReal_repr PASSED [ 21%] rpy2/tests/rinterface/test_na.py::test_NAReal_str PASSED [ 21%] rpy2/tests/rinterface/test_na.py::test_r_to_NACharacter PASSED [ 21%] rpy2/tests/rinterface/test_na.py::test_NACharacter_repr PASSED [ 21%] rpy2/tests/rinterface/test_na.py::test_NACharacter_str PASSED [ 21%] rpy2/tests/rinterface/test_na.py::test_NACharacter_to_r PASSED [ 21%] rpy2/tests/rinterface/test_na.py::test_NACharacter_in_vector PASSED [ 21%] rpy2/tests/rinterface/test_na.py::test_R_to_NAComplex PASSED [ 21%] rpy2/tests/rinterface/test_na.py::test_NAComplex_to_r PASSED [ 21%] rpy2/tests/rinterface/test_na.py::test_bool_NAComplex PASSED [ 22%] rpy2/tests/rinterface/test_noinitialization.py::test_set_initoptions SKIPPED [ 22%] rpy2/tests/rinterface/test_noinitialization.py::test_assert_isready SKIPPED [ 22%] rpy2/tests/rinterface/test_noinitialization.py::test_assert_environment_geitem SKIPPED [ 22%] rpy2/tests/rinterface/test_noinitialization.py::test_assert_rternalize SKIPPED [ 22%] rpy2/tests/rinterface/test_openrlib.py::test_dlopen_invalid PASSED [ 22%] rpy2/tests/rinterface/test_openrlib.py::test_get_dataptr_fallback PASSED [ 22%] rpy2/tests/rinterface/test_openrlib.py::test_get_symbol_or_fallback PASSED [ 22%] rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[IntSexpVector-value0-INTEGER_ELT-_get_integer_elt_fallback] PASSED [ 22%] rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[BoolSexpVector-value1-LOGICAL_ELT-_get_logical_elt_fallback] PASSED [ 23%] rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[FloatSexpVector-value2-REAL_ELT-_get_real_elt_fallback] PASSED [ 23%] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[IntSexpVector-value0-_set_integer_elt_fallback-_get_integer_elt_fallback] PASSED [ 23%] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[BoolSexpVector-value1-_set_logical_elt_fallback-_get_logical_elt_fallback] PASSED [ 23%] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[FloatSexpVector-value2-_set_real_elt_fallback-_get_real_elt_fallback] PASSED [ 23%] rpy2/tests/rinterface/test_sexp.py::test_invalid_init PASSED [ 23%] rpy2/tests/rinterface/test_sexp.py::test_init_from_existing PASSED [ 23%] rpy2/tests/rinterface/test_sexp.py::test_typeof PASSED [ 23%] rpy2/tests/rinterface/test_sexp.py::test_get PASSED [ 24%] rpy2/tests/rinterface/test_sexp.py::test_list_attrs[IntSexpVector] PASSED [ 24%] rpy2/tests/rinterface/test_sexp.py::test_list_attrs[ListSexpVector] PASSED [ 24%] rpy2/tests/rinterface/test_sexp.py::test_do_slot PASSED [ 24%] rpy2/tests/rinterface/test_sexp.py::test_names PASSED [ 24%] rpy2/tests/rinterface/test_sexp.py::test_names_set PASSED [ 24%] rpy2/tests/rinterface/test_sexp.py::test_names_set_invalid PASSED [ 24%] rpy2/tests/rinterface/test_sexp.py::test_do_slot_missing PASSED [ 24%] rpy2/tests/rinterface/test_sexp.py::test_do_slot_not_string PASSED [ 24%] rpy2/tests/rinterface/test_sexp.py::test_do_slot_empty_string PASSED [ 25%] rpy2/tests/rinterface/test_sexp.py::test_do_slot_assign_create PASSED [ 25%] rpy2/tests/rinterface/test_sexp.py::test_do_slot_reassign PASSED [ 25%] rpy2/tests/rinterface/test_sexp.py::test_do_slot_assign_empty_string PASSED [ 25%] rpy2/tests/rinterface/test_sexp.py::test_sexp_rsame_true PASSED [ 25%] rpy2/tests/rinterface/test_sexp.py::test_sexp_rsame_false PASSED [ 25%] rpy2/tests/rinterface/test_sexp.py::test_sexp_rsame_invalid PASSED [ 25%] rpy2/tests/rinterface/test_sexp.py::test___sexp__ PASSED [ 25%] rpy2/tests/rinterface/test_sexp.py::test_rclass_get PASSED [ 26%] rpy2/tests/rinterface/test_sexp.py::test_rclass_get_sym PASSED [ 26%] rpy2/tests/rinterface/test_sexp.py::test_rclass_set PASSED [ 26%] rpy2/tests/rinterface/test_sexp.py::test_rclass_set_invalid PASSED [ 26%] rpy2/tests/rinterface/test_sexp.py::test__sexp__wrongtypeof PASSED [ 26%] rpy2/tests/rinterface/test_sexp.py::test__sexp__set PASSED [ 26%] rpy2/tests/rinterface/test_sexp.py::test_deepcopy XFAIL (WIP) [ 26%] rpy2/tests/rinterface/test_sexp.py::test_rid PASSED [ 26%] rpy2/tests/rinterface/test_sexp.py::test_NULL_nonzero PASSED [ 26%] rpy2/tests/rinterface/test_sexp.py::test_charsxp_encoding PASSED [ 27%] rpy2/tests/rinterface/test_sexp.py::test_charsxp_nchar PASSED [ 27%] rpy2/tests/rinterface/test_sexp.py::test_missingtype PASSED [ 27%] rpy2/tests/rinterface/test_symbol.py::test_new_invalid PASSED [ 27%] rpy2/tests/rinterface/test_symbol.py::test_new_missing PASSED [ 27%] rpy2/tests/rinterface/test_symbol.py::test_new_fromstring PASSED [ 27%] rpy2/tests/rinterface/test_symbol.py::test_new_str PASSED [ 27%] rpy2/tests/rinterface/test_threading.py::test_threading__initr SKIPPED [ 27%] rpy2/tests/rinterface/test_threading.py::test_threading_initr_simple SKIPPED [ 28%] rpy2/tests/rinterface/test_vector_bool.py::test_init_from_seqr PASSED [ 28%] rpy2/tests/rinterface/test_vector_bool.py::test_from_int_memoryview PASSED [ 28%] rpy2/tests/rinterface/test_vector_bool.py::test_from_bool_memoryview PASSED [ 28%] rpy2/tests/rinterface/test_vector_bool.py::test_getitem PASSED [ 28%] rpy2/tests/rinterface/test_vector_bool.py::test_setitem PASSED [ 28%] rpy2/tests/rinterface/test_vector_bool.py::test_getslice PASSED [ 28%] rpy2/tests/rinterface/test_vector_bool.py::test_getslice_negative PASSED [ 28%] rpy2/tests/rinterface/test_vector_bool.py::test_setslice PASSED [ 28%] rpy2/tests/rinterface/test_vector_bool.py::test_setslice_negative PASSED [ 29%] rpy2/tests/rinterface/test_vector_bool.py::test_index PASSED [ 29%] rpy2/tests/rinterface/test_vector_byte.py::test_init_from_bytes_in_seq PASSED [ 29%] rpy2/tests/rinterface/test_vector_byte.py::test_init_from_seq_of_bytes PASSED [ 29%] rpy2/tests/rinterface/test_vector_byte.py::test_init_from_bytes PASSED [ 29%] 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rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_mixed SKIPPED [ 79%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_bool[None-0-bool-data0] SKIPPED [ 79%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_bool[None-0-bool-data1] SKIPPED [ 80%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_bool[None-0-None-data0] SKIPPED [ 80%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_bool[None-0-None-data1] SKIPPED [ 80%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_bool[None-1-bool-data0] SKIPPED [ 80%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_bool[None-1-bool-data1] SKIPPED [ 80%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_bool[None-1-None-data0] SKIPPED [ 80%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_bool[None-1-None-data1] SKIPPED [ 80%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_float[float-data0] SKIPPED [ 80%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_float[float-data1] SKIPPED [ 80%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_float[None-data0] SKIPPED [ 81%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_float[None-data1] SKIPPED [ 81%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_allnone SKIPPED [ 81%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_issue264 SKIPPED [ 81%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_object2String SKIPPED [ 81%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_object2String_with_None SKIPPED [ 81%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_factor2Category SKIPPED [ 81%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_factorwithNA2Category SKIPPED [ 81%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_orderedFactor2Category SKIPPED [ 82%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_category2Factor SKIPPED [ 82%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_categorywithNA2Factor SKIPPED [ 82%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_orderedCategory2Factor SKIPPED [ 82%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_datetime2posixct SKIPPED [ 82%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_datetime2posixct_withNA SKIPPED [ 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rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test__records_to_columns[list(list(x=1, y=3), list(x=2, y=4))-names0-values0] SKIPPED [ 83%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test__records_to_columns[list(list(x=1), list(x=2, y=4))-names1-values1] SKIPPED [ 83%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test__flatten_dataframe[data.frame( a = c("a", "b"), b = c(1, 2))-names0-values0] SKIPPED [ 83%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test__flatten_dataframe[data.frame( a = c("a", "b"), b = I(list(list(x=1, y=3), list(x=2, y=4))))-names1-values1] SKIPPED [ 84%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_dataframe_with_list[data.frame( a = c("a", "b"), b = I(list(list(x=1, y=3), list(x=2, y=4))))-names0-values0] SKIPPED [ 84%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_dataframe_with_list[data.frame( b = I(list(list(x=1, y=3), list(x=2, y=4))))-names1-values1] SKIPPED [ 84%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_dataframe_with_list[aggregate(gear ~ am, mtcars, function(x) c(mean = mean(x), sd = sd(x)), simplify=FALSE)-names2-values2] SKIPPED [ 84%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_ri2pandas_issue207 SKIPPED [ 84%] rpy2/tests/robjects/test_robjects.py::test_getitem PASSED [ 84%] rpy2/tests/robjects/test_robjects.py::test_eval PASSED [ 84%] rpy2/tests/robjects/test_robjects.py::test_items PASSED [ 84%] rpy2/tests/robjects/test_robjects.py::test_values PASSED [ 84%] rpy2/tests/robjects/test_robjects.py::test_init PASSED [ 85%] rpy2/tests/robjects/test_robjects.py::test_r_repr PASSED [ 85%] rpy2/tests/robjects/test_robjects.py::test_str PASSED [ 85%] rpy2/tests/robjects/test_robjects.py::test_rclass PASSED [ 85%] rpy2/tests/robjects/test_robjects.py::test_rclass_set PASSED [ 85%] 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rpy2/tests/robjects/test_vector.py::test_strvector_factor PASSED [ 88%] rpy2/tests/robjects/test_vector.py::test_add_operator PASSED [ 88%] rpy2/tests/robjects/test_vector.py::test_r_add_operator PASSED [ 88%] rpy2/tests/robjects/test_vector.py::test_r_sub_operator PASSED [ 88%] rpy2/tests/robjects/test_vector.py::test_r_mult_operator PASSED [ 89%] rpy2/tests/robjects/test_vector.py::test_r_matmul_operator PASSED [ 89%] rpy2/tests/robjects/test_vector.py::test_r_power_operator PASSED [ 89%] rpy2/tests/robjects/test_vector.py::test_r_truediv PASSED [ 89%] rpy2/tests/robjects/test_vector.py::test_r_floor_division PASSED [ 89%] rpy2/tests/robjects/test_vector.py::test_r_mod PASSED [ 89%] rpy2/tests/robjects/test_vector.py::test_r_and PASSED [ 89%] rpy2/tests/robjects/test_vector.py::test_r_or PASSED [ 89%] rpy2/tests/robjects/test_vector.py::test_r_invert PASSED [ 89%] rpy2/tests/robjects/test_vector.py::test_r_lt PASSED [ 90%] rpy2/tests/robjects/test_vector.py::test_r_le PASSED [ 90%] 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rpy2/tests/robjects/test_vector.py::test_nareal PASSED [ 93%] rpy2/tests/robjects/test_vector.py::test_nalogical PASSED [ 93%] rpy2/tests/robjects/test_vector.py::test_nacomplex XPASS (Edge case ...) [ 93%] rpy2/tests/robjects/test_vector.py::test_nacomplex_workaround PASSED [ 93%] rpy2/tests/robjects/test_vector.py::test_nacharacter PASSED [ 93%] rpy2/tests/robjects/test_vector.py::test_int_repr PASSED [ 93%] rpy2/tests/robjects/test_vector.py::test_list_repr PASSED [ 93%] rpy2/tests/robjects/test_vector.py::test_float_repr PASSED [ 94%] rpy2/tests/robjects/test_vector.py::test_repr_html[params0] PASSED [ 94%] rpy2/tests/robjects/test_vector.py::test_repr_html[params1] PASSED [ 94%] rpy2/tests/robjects/test_vector.py::test_repr_html[params2] PASSED [ 94%] rpy2/tests/robjects/test_vector.py::test_repr_html[params3] PASSED [ 94%] rpy2/tests/robjects/test_vector.py::test_repr_nonvectorinlist PASSED [ 94%] rpy2/tests/robjects/test_vector.py::test_items PASSED [ 94%] rpy2/tests/robjects/test_vector.py::test_itemsnonames PASSED [ 94%] rpy2/tests/robjects/test_vector.py::test_sequence_to_vector PASSED [ 94%] rpy2/tests/robjects/test_vector.py::test_sample PASSED [ 95%] 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rpy2/tests/robjects/test_vector_datetime.py::test_POSIXct_from_python_timezone[Australia/Sydney] PASSED [ 97%] rpy2/tests/robjects/test_vector_datetime.py::testPOSIXct_fromSexp PASSED [ 97%] rpy2/tests/robjects/test_vector_datetime.py::testPOSIXct_repr PASSED [ 97%] rpy2/tests/robjects/test_vector_datetime.py::testPOSIXct_getitem PASSED [ 98%] rpy2/tests/robjects/test_vector_datetime.py::testPOSIXct_iter_localized_datetime PASSED [ 98%] rpy2/tests/robjects/test_vector_extractdelegator.py::test_extract_getitem_by_index PASSED [ 98%] rpy2/tests/robjects/test_vector_extractdelegator.py::test_extract_by_index PASSED [ 98%] rpy2/tests/robjects/test_vector_extractdelegator.py::test_extract_by_name PASSED [ 98%] rpy2/tests/robjects/test_vector_extractdelegator.py::test_extract_silent_index_error PASSED [ 98%] rpy2/tests/robjects/test_vector_extractdelegator.py::test_replace PASSED [ 98%] rpy2/tests/robjects/test_vector_extractdelegator.py::test_extract_recycling_rule PASSED [ 98%] rpy2/tests/robjects/test_vector_extractdelegator.py::test_extract_list PASSED [ 98%] rpy2/tests/robjects/test_vector_factor.py::test_init PASSED [ 99%] rpy2/tests/robjects/test_vector_factor.py::test_factor_repr PASSED [ 99%] rpy2/tests/robjects/test_vector_factor.py::test_isordered PASSED [ 99%] rpy2/tests/robjects/test_vector_factor.py::test_nlevels PASSED [ 99%] rpy2/tests/robjects/test_vector_factor.py::test_levels PASSED [ 99%] rpy2/tests/robjects/test_vector_factor.py::test_levels_set PASSED [ 99%] rpy2/tests/robjects/test_vector_factor.py::test_iter_labels[abaac-abaac] PASSED [ 99%] rpy2/tests/robjects/test_vector_factor.py::test_iter_labels[values1-check_values1] PASSED [ 99%] rpy2/tests/robjects/test_vector_factor.py::test_factor_with_attrs PASSED [100%] =============================== warnings summary =============================== rpy2/tests/ipython/test_html.py:10 /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.16/rpy2/tests/ipython/test_html.py:10: UserWarning: No module named 'IPython' warnings.warn(str(no_ipython)) rpy2/tests/ipython/test_rmagic.py:29 /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.16/rpy2/tests/ipython/test_rmagic.py:29: UserWarning: No module named 'IPython' warnings.warn(str(no_ipython)) rpy2/tests/ipython/test_rmagic.py:48 /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.16/rpy2/tests/ipython/test_rmagic.py:48: PytestRemovedIn9Warning: Marks applied to fixtures have no effect See docs: https://docs.pytest.org/en/stable/deprecations.html#applying-a-mark-to-a-fixture-function @pytest.mark.skipif(IPython is None, rpy2/rinterface.py:1168 rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[IntSexpVector-value0-INTEGER_ELT-_get_integer_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[BoolSexpVector-value1-LOGICAL_ELT-_get_logical_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[FloatSexpVector-value2-REAL_ELT-_get_real_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[IntSexpVector-value0-_set_integer_elt_fallback-_get_integer_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[BoolSexpVector-value1-_set_logical_elt_fallback-_get_logical_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[FloatSexpVector-value2-_set_real_elt_fallback-_get_real_elt_fallback] /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.16/rpy2/rinterface.py:1168: UserWarning: Environment variable "LD_LIBRARY_PATH" redefined by R and overriding existing variable. warnings.warn( rpy2/rinterface.py:1168 rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[IntSexpVector-value0-INTEGER_ELT-_get_integer_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[BoolSexpVector-value1-LOGICAL_ELT-_get_logical_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[FloatSexpVector-value2-REAL_ELT-_get_real_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[IntSexpVector-value0-_set_integer_elt_fallback-_get_integer_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[BoolSexpVector-value1-_set_logical_elt_fallback-_get_logical_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[FloatSexpVector-value2-_set_real_elt_fallback-_get_real_elt_fallback] /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.16/rpy2/rinterface.py:1168: UserWarning: Environment variable "SHLVL" redefined by R and overriding existing variable. warnings.warn( rpy2/rinterface.py:1168 rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[IntSexpVector-value0-INTEGER_ELT-_get_integer_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[BoolSexpVector-value1-LOGICAL_ELT-_get_logical_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[FloatSexpVector-value2-REAL_ELT-_get_real_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[IntSexpVector-value0-_set_integer_elt_fallback-_get_integer_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[BoolSexpVector-value1-_set_logical_elt_fallback-_get_logical_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[FloatSexpVector-value2-_set_real_elt_fallback-_get_real_elt_fallback] /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.16/rpy2/rinterface.py:1168: UserWarning: Environment variable "R_SESSION_TMPDIR" redefined by R and overriding existing variable. warnings.warn( rpy2/tests/robjects/test_dataframe.py: 6 warnings rpy2/tests/robjects/test_language.py: 2 warnings rpy2/tests/robjects/test_vector.py: 6 warnings rpy2/tests/robjects/test_vector_factor.py: 5 warnings /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.16/rpy2/robjects/conversion.py:28: DeprecationWarning: The use of rpy2py in module rpy2.robjects.conversion is deprecated. Use rpy2.robjects.conversion.get_conversion() instead of rpy2.robjects.conversion.converter. warnings.warn( rpy2/tests/robjects/test_language.py::test_eval /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.16/rpy2/robjects/language.py:50: DeprecationWarning: This function is deprecated. Use evaluation_context directly. envir = ri.get_evaluation_context() rpy2/tests/robjects/test_vector_datetime.py::test_POSIXct_datetime_from_timestamp[None] /usr/lib/python3.12/site-packages/tzlocal/unix.py:193: UserWarning: Can not find any timezone configuration, defaulting to UTC. warnings.warn("Can not find any timezone configuration, defaulting to UTC.") -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html = 691 passed, 163 skipped, 3 deselected, 2 xfailed, 1 xpassed, 45 warnings in 16.70s = >>> py3-rpy2: Entering fakeroot... >>> py3-rpy2-pyc*: Running split function pyc... 'usr/lib/python3.12/site-packages/rpy2/tests/rinterface/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/tests/rinterface/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/tests/ipython/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/tests/ipython/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/tests/rlike/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/tests/rlike/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/tests/robjects/lib/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/tests/robjects/lib/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/tests/robjects/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/tests/robjects/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/tests/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/tests/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/ipython/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/ipython/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/rinterface_lib/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/rinterface_lib/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/rlike/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/rlike/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/robjects/lib/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/robjects/lib/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/robjects/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/robjects/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/interactive/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/interactive/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/__pycache__' 'usr/lib/python3.12/site-packages/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/__pycache__' >>> py3-rpy2-pyc*: Preparing subpackage py3-rpy2-pyc... >>> py3-rpy2-pyc*: Running postcheck for py3-rpy2-pyc >>> py3-rpy2*: Running postcheck for py3-rpy2 >>> py3-rpy2*: Preparing package py3-rpy2... >>> py3-rpy2*: Stripping binaries >>> py3-rpy2-pyc*: Scanning shared objects >>> py3-rpy2*: Scanning shared objects >>> py3-rpy2-pyc*: Tracing dependencies... py3-cffi py3-numpy py3-tz py3-tzlocal py3-jinja2 R python3~3.12 >>> py3-rpy2-pyc*: Package size: 1.1 MB >>> py3-rpy2-pyc*: Compressing data... >>> py3-rpy2-pyc*: Create checksum... >>> py3-rpy2-pyc*: Create py3-rpy2-pyc-3.5.16-r3.apk >>> py3-rpy2*: Tracing dependencies... py3-cffi py3-numpy py3-tz py3-tzlocal py3-jinja2 R python3~3.12 so:libR.so so:libc.musl-x86_64.so.1 >>> py3-rpy2*: Package size: 865.8 KB >>> py3-rpy2*: Compressing data... >>> py3-rpy2*: Create checksum... >>> py3-rpy2*: Create py3-rpy2-3.5.16-r3.apk >>> py3-rpy2: Build complete at Thu, 21 Nov 2024 21:10:02 +0000 elapsed time 0h 0m 27s >>> py3-rpy2: Cleaning up srcdir >>> py3-rpy2: Cleaning up pkgdir >>> py3-rpy2: Uninstalling dependencies... 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