>>> py3-rpy2: Building community/py3-rpy2 3.5.17-r1 (using abuild 3.15.0_rc3-r3) started Thu, 15 May 2025 09:47:07 +0000 >>> py3-rpy2: Validating /home/buildozer/aports/community/py3-rpy2/APKBUILD... >>> py3-rpy2: Analyzing dependencies... >>> py3-rpy2: Installing for build: build-base py3-cffi py3-numpy py3-tz py3-tzlocal py3-jinja2 R py3-gpep517 py3-setuptools py3-wheel python3-dev R-dev libdeflate-dev py3-pytest (1/131) Installing libbz2 (1.0.8-r6) (2/131) Installing libffi (3.4.8-r0) (3/131) Installing gdbm (1.24-r0) (4/131) Installing xz-libs (5.8.1-r0) (5/131) Installing mpdecimal (4.0.0-r0) (6/131) Installing libpanelw (6.5_p20250503-r0) (7/131) Installing sqlite-libs (3.49.2-r0) (8/131) Installing python3 (3.12.10-r0) (9/131) Installing python3-pycache-pyc0 (3.12.10-r0) (10/131) Installing pyc (3.12.10-r0) (11/131) Installing py3-cparser-pyc (2.22-r1) (12/131) Installing py3-cffi-pyc (1.17.1-r1) (13/131) Installing python3-pyc (3.12.10-r0) (14/131) Installing py3-cparser (2.22-r1) (15/131) Installing py3-cffi (1.17.1-r1) (16/131) Installing libquadmath (14.2.0-r6) (17/131) Installing libgfortran (14.2.0-r6) (18/131) Installing openblas (0.3.28-r0) (19/131) Installing py3-numpy (2.2.4-r0) (20/131) Installing py3-numpy-tests (2.2.4-r0) (21/131) Installing py3-numpy-pyc (2.2.4-r0) (22/131) Installing py3-tz (2025.2-r0) (23/131) Installing py3-tz-pyc (2025.2-r0) (24/131) Installing py3-attrs (25.3.0-r0) (25/131) Installing py3-attrs-pyc (25.3.0-r0) (26/131) Installing py3-tzdata (2025.2-r0) (27/131) Installing py3-tzdata-pyc (2025.2-r0) (28/131) Installing py3-tzlocal (5.3-r0) (29/131) Installing py3-tzlocal-pyc (5.3-r0) (30/131) Installing py3-markupsafe (3.0.2-r0) (31/131) Installing py3-markupsafe-pyc (3.0.2-r0) (32/131) Installing py3-jinja2 (3.1.6-r0) (33/131) Installing py3-jinja2-pyc (3.1.6-r0) (34/131) Installing R-mathlib (4.5.0-r0) (35/131) Installing tzdata (2025b-r0) (36/131) Installing libxau (1.0.12-r0) (37/131) Installing libmd (1.1.0-r0) (38/131) Installing libbsd (0.12.2-r0) (39/131) Installing libxdmcp (1.1.5-r1) (40/131) Installing libxcb (1.17.0-r0) (41/131) Installing libx11 (1.8.11-r0) (42/131) Installing libxext (1.3.6-r2) (43/131) Installing libice (1.1.2-r0) (44/131) Installing libuuid (2.41-r7) (45/131) Installing libsm (1.2.5-r0) (46/131) Installing libxt (1.3.1-r0) (47/131) Installing libxmu (1.2.1-r0) (48/131) Installing libxrender (0.9.12-r0) (49/131) Installing libpng (1.6.47-r0) (50/131) Installing freetype (2.13.3-r0) (51/131) Installing fontconfig (2.15.0-r3) (52/131) Installing pixman (0.46.0-r0) (53/131) Installing cairo (1.18.2-r1) (54/131) Installing libdeflate (1.23-r0) (55/131) Installing libintl (0.24.1-r0) (56/131) Installing libeconf (0.6.3-r0) (57/131) Installing libblkid (2.41-r7) (58/131) Installing libmount (2.41-r7) (59/131) Installing glib (2.84.1-r0) (60/131) Installing icu-data-en (76.1-r0) Executing icu-data-en-76.1-r0.post-install * * If you need ICU with non-English locales and legacy charset support, install * package icu-data-full. * (61/131) Installing icu-libs (76.1-r0) (62/131) Installing libjpeg-turbo (3.1.0-r0) (63/131) Installing libxft (2.3.8-r3) (64/131) Installing fribidi (1.0.16-r0) (65/131) Installing graphite2 (1.3.14-r6) (66/131) Installing harfbuzz (11.2.1-r0) (67/131) Installing pango (1.56.3-r0) (68/131) Installing tcl (8.6.16-r0) (69/131) Installing libsharpyuv (1.5.0-r0) (70/131) Installing libwebp (1.5.0-r0) (71/131) Installing tiff (4.7.0-r0) (72/131) Installing tk (8.6.16-r0) (73/131) Installing R (4.5.0-r0) Executing R-4.5.0-r0.post-install * * If you want to install R packages from CRAN that contains native extensions, * then you must also install R-dev. * * To avoid warnings about R.css when installing R extensions also install R-doc. * (74/131) Installing py3-installer (0.7.0-r2) (75/131) Installing py3-installer-pyc (0.7.0-r2) (76/131) Installing py3-gpep517 (19-r0) (77/131) Installing py3-gpep517-pyc (19-r0) (78/131) Installing py3-parsing (3.2.3-r0) (79/131) Installing py3-parsing-pyc (3.2.3-r0) (80/131) Installing py3-packaging (25.0-r0) (81/131) Installing py3-packaging-pyc (25.0-r0) (82/131) Installing py3-setuptools (80.5.0-r0) (83/131) Installing py3-setuptools-pyc (80.5.0-r0) (84/131) Installing py3-wheel (0.46.1-r0) (85/131) Installing py3-wheel-pyc (0.46.1-r0) (86/131) Installing python3-dev (3.12.10-r0) (87/131) Installing bzip2-dev (1.0.8-r6) (88/131) Installing brotli (1.1.0-r2) (89/131) Installing brotli-dev (1.1.0-r2) (90/131) Installing c-ares-dev (1.34.5-r0) (91/131) Installing libidn2-dev (2.3.7-r0) (92/131) Installing libpsl-utils (0.21.5-r3) (93/131) Installing libpsl-dev (0.21.5-r3) (94/131) Installing nghttp2-dev (1.65.0-r0) (95/131) Installing openssl-dev (3.5.0-r0) (96/131) Installing zlib-dev (1.3.1-r2) (97/131) Installing zstd (1.5.7-r0) (98/131) Installing zstd-dev (1.5.7-r0) (99/131) Installing curl-dev (8.13.0-r1) (100/131) Installing gfortran (14.2.0-r6) (101/131) Installing icu (76.1-r0) (102/131) Installing icu-dev (76.1-r0) (103/131) Installing libdeflate-dev (1.23-r0) (104/131) Installing libpng-dev (1.6.47-r0) (105/131) Installing liblapack (0.3.28-r0) (106/131) Installing liblapacke (0.3.28-r0) (107/131) Installing openblas-ilp64 (0.3.28-r0) (108/131) Installing openblas-dev (0.3.28-r0) (109/131) Installing bsd-compat-headers (0.7.2-r6) (110/131) Installing libformw (6.5_p20250503-r0) (111/131) Installing libmenuw (6.5_p20250503-r0) (112/131) Installing libncurses++ (6.5_p20250503-r0) (113/131) Installing ncurses-dev (6.5_p20250503-r0) (114/131) Installing libedit-dev (20250104.3.1-r0) (115/131) Installing libpcre2-16 (10.43-r1) (116/131) Installing libpcre2-32 (10.43-r1) (117/131) Installing pcre2-dev (10.43-r1) (118/131) Installing libhistory (8.2.13-r0) (119/131) Installing readline-dev (8.2.13-r0) (120/131) Installing xz (5.8.1-r0) (121/131) Installing xz-dev (5.8.1-r0) (122/131) Installing R-dev (4.5.0-r0) (123/131) Installing py3-iniconfig (2.1.0-r0) (124/131) Installing py3-iniconfig-pyc (2.1.0-r0) (125/131) Installing py3-pluggy (1.5.0-r0) (126/131) Installing py3-pluggy-pyc (1.5.0-r0) (127/131) Installing py3-py (1.11.0-r4) (128/131) Installing py3-py-pyc (1.11.0-r4) (129/131) Installing py3-pytest (8.3.5-r0) (130/131) Installing py3-pytest-pyc (8.3.5-r0) (131/131) Installing .makedepends-py3-rpy2 (20250515.094708) Executing busybox-1.37.0-r17.trigger Executing glib-2.84.1-r0.trigger OK: 742 MiB in 237 packages >>> py3-rpy2: Cleaning up srcdir >>> py3-rpy2: Cleaning up pkgdir >>> py3-rpy2: Cleaning up tmpdir >>> py3-rpy2: Fetching https://distfiles.alpinelinux.org/distfiles/edge/py3-rpy2-3.5.17.tar.gz Connecting to distfiles.alpinelinux.org (172.105.82.32:443) saving to '/var/cache/distfiles/edge/py3-rpy2-3.5.17.tar.gz.part' py3-rpy2-3.5.17.tar. 100% |********************************| 215k 0:00:00 ETA '/var/cache/distfiles/edge/py3-rpy2-3.5.17.tar.gz.part' saved >>> py3-rpy2: Fetching https://distfiles.alpinelinux.org/distfiles/edge/py3-rpy2-3.5.17.tar.gz >>> py3-rpy2: Checking sha512sums... py3-rpy2-3.5.17.tar.gz: OK r-4.5.0.patch: OK >>> py3-rpy2: Unpacking /var/cache/distfiles/edge/py3-rpy2-3.5.17.tar.gz... >>> py3-rpy2: r-4.5.0.patch patching file rpy2/rinterface_lib/R_API_eventloop.h 2025-05-15 09:47:11,524 gpep517 INFO Building wheel via backend setuptools.build_meta 2025-05-15 09:47:11,549 situation INFO R home found: /usr/lib/R 2025-05-15 09:47:11,549 situation INFO cffi mode is CFFI_MODE.ANY 2025-05-15 09:47:11,549 situation INFO R exec path: /usr/lib/R/bin/R 2025-05-15 09:47:11,576 situation INFO R exec path: /usr/lib/R/bin/R 2025-05-15 09:47:11,602 root INFO creating /tmp/tmp_pw_r_om3ri2q1/tmp/tmp_pw_r_om3ri2q1 2025-05-15 09:47:11,603 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fno-plt -fPIC -I/usr/include/R -c /tmp/tmp_pw_r_om3ri2q1/test_pw_r.c -o /tmp/tmp_pw_r_om3ri2q1/tmp/tmp_pw_r_om3ri2q1/test_pw_r.o 2025-05-15 09:47:11,631 root INFO cc /tmp/tmp_pw_r_om3ri2q1/tmp/tmp_pw_r_om3ri2q1/test_pw_r.o -L/usr/lib/R/lib -lR -lpcre2-8 -ldeflate -lzstd -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n -o /tmp/tmp_pw_r_om3ri2q1/test_pw_r 2025-05-15 09:47:11,676 situation INFO cffi mode is CFFI_MODE.ANY 2025-05-15 09:47:11,757 situation INFO R home found: /usr/lib/R 2025-05-15 09:47:11,757 situation INFO R exec path: /usr/lib/R/bin/R 2025-05-15 09:47:11,783 situation INFO R exec path: /usr/lib/R/bin/R 2025-05-15 09:47:11,808 situation INFO R exec path: /usr/lib/R/bin/R 2025-05-15 09:47:11,826 situation INFO R exec path: /usr/lib/R/bin/R 2025-05-15 09:47:11,924 situation INFO cffi mode is CFFI_MODE.ANY 2025-05-15 09:47:11,976 situation INFO R home found: /usr/lib/R 2025-05-15 09:47:11,977 situation INFO R exec path: /usr/lib/R/bin/R 2025-05-15 09:47:11,999 situation INFO R exec path: /usr/lib/R/bin/R 2025-05-15 09:47:12,026 situation INFO R exec path: /usr/lib/R/bin/R 2025-05-15 09:47:12,046 situation INFO R exec path: /usr/lib/R/bin/R /usr/lib/python3.12/site-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). By 2026-Feb-18, you need to update your project and remove deprecated calls or your builds will no longer be supported. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) /usr/lib/python3.12/site-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! dist._finalize_license_expression() /usr/lib/python3.12/site-packages/setuptools/dist.py:761: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() 2025-05-15 09:47:12,179 root INFO running bdist_wheel 2025-05-15 09:47:12,193 root INFO running build 2025-05-15 09:47:12,193 root INFO running build_py 2025-05-15 09:47:12,193 root WARNING file _rinterface_cffi_abi.py (for module _rinterface_cffi_abi) not found 2025-05-15 09:47:12,194 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2 2025-05-15 09:47:12,194 root INFO copying rpy2/rinterface.py -> build/lib.linux-x86_64-cpython-312/rpy2 2025-05-15 09:47:12,195 root INFO copying rpy2/situation.py -> build/lib.linux-x86_64-cpython-312/rpy2 2025-05-15 09:47:12,195 root INFO copying rpy2/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2 2025-05-15 09:47:12,195 root INFO copying rpy2/_rinterface_cffi_build.py -> build/lib.linux-x86_64-cpython-312/rpy2 2025-05-15 09:47:12,196 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/rlike 2025-05-15 09:47:12,196 root INFO copying rpy2/rlike/indexing.py -> build/lib.linux-x86_64-cpython-312/rpy2/rlike 2025-05-15 09:47:12,196 root INFO copying rpy2/rlike/functional.py -> build/lib.linux-x86_64-cpython-312/rpy2/rlike 2025-05-15 09:47:12,196 root INFO copying rpy2/rlike/container.py -> build/lib.linux-x86_64-cpython-312/rpy2/rlike 2025-05-15 09:47:12,197 root INFO copying rpy2/rlike/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/rlike 2025-05-15 09:47:12,197 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,197 root INFO copying rpy2/rinterface_lib/_rinterface_capi.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,198 root INFO copying rpy2/rinterface_lib/embedded.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,198 root INFO copying rpy2/rinterface_lib/embedded_mswin.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,198 root INFO copying rpy2/rinterface_lib/conversion.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,198 root INFO copying rpy2/rinterface_lib/openrlib.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,199 root INFO copying rpy2/rinterface_lib/callbacks.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,199 root INFO copying rpy2/rinterface_lib/ffi_proxy.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,199 root INFO copying rpy2/rinterface_lib/sexp.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,200 root INFO copying rpy2/rinterface_lib/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,200 root INFO copying rpy2/rinterface_lib/na_values.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,200 root INFO copying rpy2/rinterface_lib/memorymanagement.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,200 root INFO copying rpy2/rinterface_lib/bufferprotocol.py -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,201 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/robjects 2025-05-15 09:47:12,201 root INFO copying rpy2/robjects/vectors.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2025-05-15 09:47:12,201 root INFO copying rpy2/robjects/pandas2ri.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2025-05-15 09:47:12,202 root INFO copying rpy2/robjects/robject.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2025-05-15 09:47:12,202 root INFO copying rpy2/robjects/packages_utils.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2025-05-15 09:47:12,202 root INFO copying rpy2/robjects/conversion.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2025-05-15 09:47:12,203 root INFO copying rpy2/robjects/help.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2025-05-15 09:47:12,203 root INFO copying rpy2/robjects/methods.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2025-05-15 09:47:12,203 root INFO copying rpy2/robjects/constants.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2025-05-15 09:47:12,203 root INFO copying rpy2/robjects/packages.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2025-05-15 09:47:12,204 root INFO copying rpy2/robjects/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2025-05-15 09:47:12,204 root INFO copying rpy2/robjects/numpy2ri.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2025-05-15 09:47:12,204 root INFO copying rpy2/robjects/language.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2025-05-15 09:47:12,205 root INFO copying rpy2/robjects/functions.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2025-05-15 09:47:12,205 root INFO copying rpy2/robjects/environments.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects 2025-05-15 09:47:12,205 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib 2025-05-15 09:47:12,205 root INFO copying rpy2/robjects/lib/dbplyr.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib 2025-05-15 09:47:12,206 root INFO copying rpy2/robjects/lib/ggplot2.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib 2025-05-15 09:47:12,206 root INFO copying rpy2/robjects/lib/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib 2025-05-15 09:47:12,206 root INFO copying rpy2/robjects/lib/tidyr.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib 2025-05-15 09:47:12,207 root INFO copying rpy2/robjects/lib/dplyr.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib 2025-05-15 09:47:12,207 root INFO copying rpy2/robjects/lib/grid.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib 2025-05-15 09:47:12,207 root INFO copying rpy2/robjects/lib/grdevices.py -> build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib 2025-05-15 09:47:12,208 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/interactive 2025-05-15 09:47:12,208 root INFO copying rpy2/interactive/process_revents.py -> build/lib.linux-x86_64-cpython-312/rpy2/interactive 2025-05-15 09:47:12,208 root INFO copying rpy2/interactive/packages.py -> build/lib.linux-x86_64-cpython-312/rpy2/interactive 2025-05-15 09:47:12,208 root INFO copying rpy2/interactive/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/interactive 2025-05-15 09:47:12,209 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/ipython 2025-05-15 09:47:12,209 root INFO copying rpy2/ipython/rmagic.py -> build/lib.linux-x86_64-cpython-312/rpy2/ipython 2025-05-15 09:47:12,209 root INFO copying rpy2/ipython/ggplot.py -> build/lib.linux-x86_64-cpython-312/rpy2/ipython 2025-05-15 09:47:12,209 root INFO copying rpy2/ipython/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/ipython 2025-05-15 09:47:12,210 root INFO copying rpy2/ipython/html.py -> build/lib.linux-x86_64-cpython-312/rpy2/ipython 2025-05-15 09:47:12,210 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/tests 2025-05-15 09:47:12,210 root INFO copying rpy2/tests/utils.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests 2025-05-15 09:47:12,211 root INFO copying rpy2/tests/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests 2025-05-15 09:47:12,211 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,211 root INFO copying rpy2/tests/rinterface/test_vector_int.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,212 root INFO copying rpy2/tests/rinterface/test_noinitialization.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,212 root INFO copying rpy2/tests/rinterface/test_vector_list.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,212 root INFO copying rpy2/tests/rinterface/test_functions.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,212 root INFO copying rpy2/tests/rinterface/test_embedded_r.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,213 root INFO copying rpy2/tests/rinterface/test_environment.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,213 root INFO copying rpy2/tests/rinterface/test_sexp.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,213 root INFO copying rpy2/tests/rinterface/test_vector_str.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,214 root INFO copying rpy2/tests/rinterface/test_conversion.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,214 root INFO copying rpy2/tests/rinterface/test_vector_numpy.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,214 root INFO copying rpy2/tests/rinterface/test_bufferprotocol.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,214 root INFO copying rpy2/tests/rinterface/test_vector_byte.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,215 root INFO copying rpy2/tests/rinterface/test_symbol.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,215 root INFO copying rpy2/tests/rinterface/test_openrlib.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,215 root INFO copying rpy2/tests/rinterface/test_vector_lang.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,215 root INFO copying rpy2/tests/rinterface/test_na.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,216 root INFO copying rpy2/tests/rinterface/test_vector_pairlist.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,216 root INFO copying rpy2/tests/rinterface/test_callbacks.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,216 root INFO copying rpy2/tests/rinterface/test_memorymanagement.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,217 root INFO copying rpy2/tests/rinterface/test_vector_bool.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,217 root INFO copying rpy2/tests/rinterface/test_externalptr.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,217 root INFO copying rpy2/tests/rinterface/test_vector_float.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,217 root INFO copying rpy2/tests/rinterface/test_vector_complex.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,218 root INFO copying rpy2/tests/rinterface/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,218 root INFO copying rpy2/tests/rinterface/test_threading.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,218 root INFO copying rpy2/tests/rinterface/test_vectors.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,218 root INFO copying rpy2/tests/rinterface/test_endr.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface 2025-05-15 09:47:12,219 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/tests/rlike 2025-05-15 09:47:12,219 root INFO copying rpy2/tests/rlike/test_container.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rlike 2025-05-15 09:47:12,219 root INFO copying rpy2/tests/rlike/test_indexing.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rlike 2025-05-15 09:47:12,219 root INFO copying rpy2/tests/rlike/test_functional.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/rlike 2025-05-15 09:47:12,220 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,220 root INFO copying rpy2/tests/robjects/test_function.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,221 root INFO copying rpy2/tests/robjects/test_environment.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,221 root INFO copying rpy2/tests/robjects/test_conversion_numpy.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,221 root INFO copying rpy2/tests/robjects/test_conversion.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,221 root INFO copying rpy2/tests/robjects/test_methods.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,222 root INFO copying rpy2/tests/robjects/test_vector.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,222 root INFO copying rpy2/tests/robjects/test_language.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,222 root INFO copying rpy2/tests/robjects/test_vector_factor.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,222 root INFO copying rpy2/tests/robjects/test_help.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,223 root INFO copying rpy2/tests/robjects/test_formula.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,223 root INFO copying rpy2/tests/robjects/test_dataframe.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,223 root INFO copying rpy2/tests/robjects/test_robjects.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,224 root INFO copying rpy2/tests/robjects/test_serialization.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,224 root INFO copying rpy2/tests/robjects/test_vector_extractdelegator.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,224 root INFO copying rpy2/tests/robjects/test_translated_function.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,224 root INFO copying rpy2/tests/robjects/test_pandas_conversions.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,225 root INFO copying rpy2/tests/robjects/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,225 root INFO copying rpy2/tests/robjects/test_packages.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,225 root INFO copying rpy2/tests/robjects/test_vector_datetime.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,225 root INFO copying rpy2/tests/robjects/test_rs4.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,226 root INFO copying rpy2/tests/robjects/test_array.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,226 root INFO copying rpy2/tests/robjects/test_packages_utils.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects 2025-05-15 09:47:12,226 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/tests/ipython 2025-05-15 09:47:12,227 root INFO copying rpy2/tests/ipython/test_ggplot.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/ipython 2025-05-15 09:47:12,227 root INFO copying rpy2/tests/ipython/test_rmagic.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/ipython 2025-05-15 09:47:12,227 root INFO copying rpy2/tests/ipython/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/ipython 2025-05-15 09:47:12,227 root INFO copying rpy2/tests/ipython/test_html.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/ipython 2025-05-15 09:47:12,228 root INFO creating build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib 2025-05-15 09:47:12,228 root INFO copying rpy2/tests/robjects/lib/test_dplyr.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib 2025-05-15 09:47:12,228 root INFO copying rpy2/tests/robjects/lib/test_grdevices.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib 2025-05-15 09:47:12,229 root INFO copying rpy2/tests/robjects/lib/test_ggplot2.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib 2025-05-15 09:47:12,229 root INFO copying rpy2/tests/robjects/lib/test_grid.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib 2025-05-15 09:47:12,229 root INFO copying rpy2/tests/robjects/lib/__init__.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib 2025-05-15 09:47:12,229 root INFO copying rpy2/tests/robjects/lib/test_dbplyr.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib 2025-05-15 09:47:12,230 root INFO copying rpy2/tests/robjects/lib/test_tidyr.py -> build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib 2025-05-15 09:47:12,230 root INFO running egg_info 2025-05-15 09:47:12,235 root INFO writing rpy2.egg-info/PKG-INFO 2025-05-15 09:47:12,241 root INFO writing dependency_links to rpy2.egg-info/dependency_links.txt 2025-05-15 09:47:12,245 root INFO writing requirements to rpy2.egg-info/requires.txt 2025-05-15 09:47:12,246 root INFO writing top-level names to rpy2.egg-info/top_level.txt 2025-05-15 09:47:12,255 root INFO reading manifest file 'rpy2.egg-info/SOURCES.txt' 2025-05-15 09:47:12,258 root INFO reading manifest template 'MANIFEST.in' 2025-05-15 09:47:12,265 root WARNING warning: no files found matching 'README' anywhere in distribution 2025-05-15 09:47:12,266 root WARNING warning: no previously-included files matching '*patch*' found anywhere in distribution 2025-05-15 09:47:12,266 root WARNING warning: no previously-included files matching '*diff*' found anywhere in distribution 2025-05-15 09:47:12,266 root WARNING warning: no previously-included files matching '.hg' found anywhere in distribution 2025-05-15 09:47:12,266 root WARNING warning: no files found matching 'MANIFEST' 2025-05-15 09:47:12,267 root WARNING warning: no files found matching '_rinterface_cffi_build' 2025-05-15 09:47:12,267 root WARNING warning: no files found matching 'rpy/__init__.py' 2025-05-15 09:47:12,267 root WARNING warning: no files found matching 'rpy/situation.py' 2025-05-15 09:47:12,267 root WARNING warning: no files found matching '*.py' under directory 'rpy/robjects' 2025-05-15 09:47:12,267 root WARNING warning: no files found matching '*.py' under directory 'rpy/ipython' 2025-05-15 09:47:12,267 root WARNING warning: no files found matching '*.py' under directory 'rpy/interactive' 2025-05-15 09:47:12,268 root WARNING warning: no files found matching '*.py' under directory 'rpy/rlike' 2025-05-15 09:47:12,268 root WARNING no previously-included directories found matching 'dist' 2025-05-15 09:47:12,268 root WARNING warning: no files found matching 'doc/source/rpy2_logo.png' 2025-05-15 09:47:12,268 root INFO adding license file 'LICENSE' 2025-05-15 09:47:12,268 root INFO adding license file 'AUTHORS' 2025-05-15 09:47:12,271 root INFO writing manifest file 'rpy2.egg-info/SOURCES.txt' 2025-05-15 09:47:12,273 root INFO copying rpy2/rinterface_lib/R_API.h -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,274 root INFO copying rpy2/rinterface_lib/R_API_eventloop.h -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,274 root INFO copying rpy2/rinterface_lib/R_API_eventloop.c -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,274 root INFO copying rpy2/rinterface_lib/RPY2.h -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,274 root INFO copying rpy2/rinterface_lib/_bufferprotocol.c -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,275 root INFO copying rpy2/rinterface_lib/R_API_eventloop.h -> build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,275 root WARNING file _rinterface_cffi_abi.py (for module _rinterface_cffi_abi) not found 2025-05-15 09:47:12,277 root INFO generating cffi module 'build/lib.linux-x86_64-cpython-312/_rinterface_cffi_abi.py' 2025-05-15 09:47:12,287 root INFO running build_ext 2025-05-15 09:47:12,287 root INFO generating cffi module 'build/temp.linux-x86_64-cpython-312/_rinterface_cffi_api.c' 2025-05-15 09:47:12,287 root INFO creating build/temp.linux-x86_64-cpython-312 2025-05-15 09:47:12,306 root INFO building 'rpy2.rinterface_lib._bufferprotocol' extension 2025-05-15 09:47:12,307 root INFO creating build/temp.linux-x86_64-cpython-312/rpy2/rinterface_lib 2025-05-15 09:47:12,307 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fno-plt -fPIC -I/usr/include/python3.12 -c rpy2/rinterface_lib/_bufferprotocol.c -o build/temp.linux-x86_64-cpython-312/rpy2/rinterface_lib/_bufferprotocol.o 2025-05-15 09:47:12,452 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security -fno-plt build/temp.linux-x86_64-cpython-312/rpy2/rinterface_lib/_bufferprotocol.o -L/usr/lib -o build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/_bufferprotocol.cpython-312-x86_64-linux-musl.so 2025-05-15 09:47:12,465 root INFO building '_rinterface_cffi_api' extension 2025-05-15 09:47:12,465 root INFO creating build/temp.linux-x86_64-cpython-312/build/temp.linux-x86_64-cpython-312 2025-05-15 09:47:12,465 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fno-plt -fPIC -DRPY2_RLEN_LONG=True -DR_INTERFACE_PTRS=True -Irpy2/rinterface_lib/ -I/usr/include/python3.12 -c build/temp.linux-x86_64-cpython-312/_rinterface_cffi_api.c -o build/temp.linux-x86_64-cpython-312/build/temp.linux-x86_64-cpython-312/_rinterface_cffi_api.o -std=c99 2025-05-15 09:47:15,404 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security -fno-plt build/temp.linux-x86_64-cpython-312/build/temp.linux-x86_64-cpython-312/_rinterface_cffi_api.o -L/usr/lib/R/lib -L/usr/lib -lR -lpcre2-8 -ldeflate -lzstd -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n -lopenblas -o build/lib.linux-x86_64-cpython-312/_rinterface_cffi_api.abi3.so -Wl,--export-dynamic -fopenmp -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Wl,-rpath,/usr/lib/R/lib 2025-05-15 09:47:15,451 root INFO installing to build/bdist.linux-x86_64/wheel 2025-05-15 09:47:15,451 root INFO running install 2025-05-15 09:47:15,461 root INFO running install_lib 2025-05-15 09:47:15,465 root INFO creating build/bdist.linux-x86_64/wheel 2025-05-15 09:47:15,465 root INFO creating build/bdist.linux-x86_64/wheel/rpy2 2025-05-15 09:47:15,465 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/tests 2025-05-15 09:47:15,466 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/tests/rinterface 2025-05-15 09:47:15,466 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_int.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,470 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_noinitialization.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,470 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_list.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,470 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_functions.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,470 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_embedded_r.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,471 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_environment.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,471 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_sexp.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,471 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_str.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,471 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_conversion.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,471 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_numpy.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,472 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_bufferprotocol.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,472 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_byte.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,472 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_symbol.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,472 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_openrlib.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,472 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_lang.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,473 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_na.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,473 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_pairlist.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,473 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_callbacks.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,473 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_memorymanagement.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,473 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_bool.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,474 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_externalptr.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,474 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_float.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,474 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vector_complex.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,474 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/__init__.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,474 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_threading.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,475 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_vectors.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,475 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rinterface/test_endr.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rinterface 2025-05-15 09:47:15,475 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/tests/ipython 2025-05-15 09:47:15,475 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/ipython/test_ggplot.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/ipython 2025-05-15 09:47:15,475 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/ipython/test_rmagic.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/ipython 2025-05-15 09:47:15,476 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/ipython/__init__.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/ipython 2025-05-15 09:47:15,476 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/ipython/test_html.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/ipython 2025-05-15 09:47:15,476 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/tests/rlike 2025-05-15 09:47:15,476 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rlike/test_container.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rlike 2025-05-15 09:47:15,477 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rlike/test_indexing.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rlike 2025-05-15 09:47:15,477 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/rlike/test_functional.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/rlike 2025-05-15 09:47:15,477 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/utils.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests 2025-05-15 09:47:15,477 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/tests/robjects 2025-05-15 09:47:15,477 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_function.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,478 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_environment.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,478 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_conversion_numpy.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,478 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/tests/robjects/lib 2025-05-15 09:47:15,478 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib/test_dplyr.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects/lib 2025-05-15 09:47:15,479 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib/test_grdevices.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects/lib 2025-05-15 09:47:15,479 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib/test_ggplot2.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects/lib 2025-05-15 09:47:15,479 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib/test_grid.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects/lib 2025-05-15 09:47:15,479 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib/__init__.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects/lib 2025-05-15 09:47:15,479 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib/test_dbplyr.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects/lib 2025-05-15 09:47:15,480 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/lib/test_tidyr.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects/lib 2025-05-15 09:47:15,480 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_conversion.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,480 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_methods.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,480 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_vector.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,480 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_language.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,481 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_vector_factor.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,481 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_help.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,481 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_formula.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,481 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_dataframe.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,481 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_robjects.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,482 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_serialization.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,482 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_vector_extractdelegator.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,482 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_translated_function.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,482 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_pandas_conversions.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,482 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/__init__.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,483 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_packages.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,483 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_vector_datetime.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,483 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_rs4.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,483 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_array.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,483 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/robjects/test_packages_utils.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests/robjects 2025-05-15 09:47:15,484 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/tests/__init__.py -> build/bdist.linux-x86_64/wheel/./rpy2/tests 2025-05-15 09:47:15,484 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/ipython 2025-05-15 09:47:15,484 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/ipython/rmagic.py -> build/bdist.linux-x86_64/wheel/./rpy2/ipython 2025-05-15 09:47:15,484 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/ipython/ggplot.py -> build/bdist.linux-x86_64/wheel/./rpy2/ipython 2025-05-15 09:47:15,484 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/ipython/__init__.py -> build/bdist.linux-x86_64/wheel/./rpy2/ipython 2025-05-15 09:47:15,485 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/ipython/html.py -> build/bdist.linux-x86_64/wheel/./rpy2/ipython 2025-05-15 09:47:15,485 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/rinterface_lib 2025-05-15 09:47:15,485 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/R_API_eventloop.h -> build/bdist.linux-x86_64/wheel/./rpy2/rinterface_lib 2025-05-15 09:47:15,485 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/_rinterface_capi.py -> build/bdist.linux-x86_64/wheel/./rpy2/rinterface_lib 2025-05-15 09:47:15,486 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/R_API.h -> build/bdist.linux-x86_64/wheel/./rpy2/rinterface_lib 2025-05-15 09:47:15,486 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/embedded.py -> build/bdist.linux-x86_64/wheel/./rpy2/rinterface_lib 2025-05-15 09:47:15,486 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/embedded_mswin.py -> build/bdist.linux-x86_64/wheel/./rpy2/rinterface_lib 2025-05-15 09:47:15,486 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/conversion.py -> build/bdist.linux-x86_64/wheel/./rpy2/rinterface_lib 2025-05-15 09:47:15,487 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/RPY2.h -> build/bdist.linux-x86_64/wheel/./rpy2/rinterface_lib 2025-05-15 09:47:15,487 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/openrlib.py -> build/bdist.linux-x86_64/wheel/./rpy2/rinterface_lib 2025-05-15 09:47:15,487 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/callbacks.py -> build/bdist.linux-x86_64/wheel/./rpy2/rinterface_lib 2025-05-15 09:47:15,487 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/ffi_proxy.py -> build/bdist.linux-x86_64/wheel/./rpy2/rinterface_lib 2025-05-15 09:47:15,487 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/sexp.py -> build/bdist.linux-x86_64/wheel/./rpy2/rinterface_lib 2025-05-15 09:47:15,488 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/__init__.py -> build/bdist.linux-x86_64/wheel/./rpy2/rinterface_lib 2025-05-15 09:47:15,488 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/na_values.py -> build/bdist.linux-x86_64/wheel/./rpy2/rinterface_lib 2025-05-15 09:47:15,488 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/R_API_eventloop.c -> build/bdist.linux-x86_64/wheel/./rpy2/rinterface_lib 2025-05-15 09:47:15,488 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/memorymanagement.py -> build/bdist.linux-x86_64/wheel/./rpy2/rinterface_lib 2025-05-15 09:47:15,488 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/bufferprotocol.py -> build/bdist.linux-x86_64/wheel/./rpy2/rinterface_lib 2025-05-15 09:47:15,489 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/_bufferprotocol.c -> build/bdist.linux-x86_64/wheel/./rpy2/rinterface_lib 2025-05-15 09:47:15,489 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface_lib/_bufferprotocol.cpython-312-x86_64-linux-musl.so -> build/bdist.linux-x86_64/wheel/./rpy2/rinterface_lib 2025-05-15 09:47:15,489 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/rlike 2025-05-15 09:47:15,489 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rlike/indexing.py -> build/bdist.linux-x86_64/wheel/./rpy2/rlike 2025-05-15 09:47:15,489 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rlike/functional.py -> build/bdist.linux-x86_64/wheel/./rpy2/rlike 2025-05-15 09:47:15,490 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rlike/container.py -> build/bdist.linux-x86_64/wheel/./rpy2/rlike 2025-05-15 09:47:15,490 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rlike/__init__.py -> build/bdist.linux-x86_64/wheel/./rpy2/rlike 2025-05-15 09:47:15,490 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/rinterface.py -> build/bdist.linux-x86_64/wheel/./rpy2 2025-05-15 09:47:15,490 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/robjects 2025-05-15 09:47:15,490 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/vectors.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects 2025-05-15 09:47:15,491 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/pandas2ri.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects 2025-05-15 09:47:15,491 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/robjects/lib 2025-05-15 09:47:15,491 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib/dbplyr.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects/lib 2025-05-15 09:47:15,491 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib/ggplot2.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects/lib 2025-05-15 09:47:15,492 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib/__init__.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects/lib 2025-05-15 09:47:15,492 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib/tidyr.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects/lib 2025-05-15 09:47:15,492 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib/dplyr.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects/lib 2025-05-15 09:47:15,492 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib/grid.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects/lib 2025-05-15 09:47:15,492 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/lib/grdevices.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects/lib 2025-05-15 09:47:15,493 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/robject.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects 2025-05-15 09:47:15,493 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/packages_utils.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects 2025-05-15 09:47:15,493 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/conversion.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects 2025-05-15 09:47:15,493 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/help.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects 2025-05-15 09:47:15,494 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/methods.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects 2025-05-15 09:47:15,494 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/constants.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects 2025-05-15 09:47:15,494 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/packages.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects 2025-05-15 09:47:15,494 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/__init__.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects 2025-05-15 09:47:15,494 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/numpy2ri.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects 2025-05-15 09:47:15,495 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/language.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects 2025-05-15 09:47:15,495 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/functions.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects 2025-05-15 09:47:15,495 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/robjects/environments.py -> build/bdist.linux-x86_64/wheel/./rpy2/robjects 2025-05-15 09:47:15,495 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/situation.py -> build/bdist.linux-x86_64/wheel/./rpy2 2025-05-15 09:47:15,495 root INFO creating build/bdist.linux-x86_64/wheel/rpy2/interactive 2025-05-15 09:47:15,496 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/interactive/process_revents.py -> build/bdist.linux-x86_64/wheel/./rpy2/interactive 2025-05-15 09:47:15,496 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/interactive/packages.py -> build/bdist.linux-x86_64/wheel/./rpy2/interactive 2025-05-15 09:47:15,496 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/interactive/__init__.py -> build/bdist.linux-x86_64/wheel/./rpy2/interactive 2025-05-15 09:47:15,496 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/__init__.py -> build/bdist.linux-x86_64/wheel/./rpy2 2025-05-15 09:47:15,496 root INFO copying build/lib.linux-x86_64-cpython-312/rpy2/_rinterface_cffi_build.py -> build/bdist.linux-x86_64/wheel/./rpy2 2025-05-15 09:47:15,497 root INFO copying build/lib.linux-x86_64-cpython-312/_rinterface_cffi_api.abi3.so -> build/bdist.linux-x86_64/wheel/. 2025-05-15 09:47:15,497 root INFO copying build/lib.linux-x86_64-cpython-312/_rinterface_cffi_abi.py -> build/bdist.linux-x86_64/wheel/. 2025-05-15 09:47:15,497 root INFO running install_egg_info 2025-05-15 09:47:15,501 root INFO Copying rpy2.egg-info to build/bdist.linux-x86_64/wheel/./rpy2-3.5.17-py3.12.egg-info 2025-05-15 09:47:15,502 root INFO running install_scripts 2025-05-15 09:47:15,509 root INFO creating build/bdist.linux-x86_64/wheel/rpy2-3.5.17.dist-info/WHEEL 2025-05-15 09:47:15,509 wheel INFO creating '/home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.17/.dist/.tmp-x_fcqsuu/rpy2-3.5.17-cp312-cp312-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it 2025-05-15 09:47:15,509 wheel INFO adding '_rinterface_cffi_abi.py' 2025-05-15 09:47:15,510 wheel INFO adding '_rinterface_cffi_api.abi3.so' 2025-05-15 09:47:15,511 wheel INFO adding 'rpy2/__init__.py' 2025-05-15 09:47:15,511 wheel INFO adding 'rpy2/_rinterface_cffi_build.py' 2025-05-15 09:47:15,511 wheel INFO adding 'rpy2/rinterface.py' 2025-05-15 09:47:15,512 wheel INFO adding 'rpy2/situation.py' 2025-05-15 09:47:15,512 wheel INFO adding 'rpy2/interactive/__init__.py' 2025-05-15 09:47:15,512 wheel INFO adding 'rpy2/interactive/packages.py' 2025-05-15 09:47:15,513 wheel INFO adding 'rpy2/interactive/process_revents.py' 2025-05-15 09:47:15,513 wheel INFO adding 'rpy2/ipython/__init__.py' 2025-05-15 09:47:15,513 wheel INFO adding 'rpy2/ipython/ggplot.py' 2025-05-15 09:47:15,513 wheel INFO adding 'rpy2/ipython/html.py' 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API mode interface built. To change the API/ABI build mode, set or modify the environment variable RPY2_CFFI_MODE. ============================= test session starts ============================== platform linux -- Python 3.12.10, pytest-8.3.5, pluggy-1.5.0 -- /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.17/.testenv/bin/python3 cachedir: .pytest_cache rootdir: /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.17 configfile: pyproject.toml testpaths: rpy2/tests collecting ... collected 859 items / 3 deselected / 856 selected rpy2/tests/ipython/test_ggplot.py::test_image_png SKIPPED (The R pac...) [ 0%] rpy2/tests/ipython/test_html.py::test_html_func[o0-None] SKIPPED (Th...) [ 0%] rpy2/tests/ipython/test_html.py::test_html_func[o1-None] SKIPPED (Th...) [ 0%] rpy2/tests/ipython/test_html.py::test_html_func[o2-None] SKIPPED (Th...) [ 0%] rpy2/tests/ipython/test_html.py::test_html_func[o3-None] SKIPPED (Th...) 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[ 3%] rpy2/tests/rinterface/test_bufferprotocol.py::test_getrank PASSED [ 3%] rpy2/tests/rinterface/test_bufferprotocol.py::test_getshape PASSED [ 3%] rpy2/tests/rinterface/test_bufferprotocol.py::test_getstrides PASSED [ 3%] rpy2/tests/rinterface/test_callbacks.py::test_consolewrite_print PASSED [ 4%] rpy2/tests/rinterface/test_callbacks.py::test_set_consolewrite_print PASSED [ 4%] rpy2/tests/rinterface/test_callbacks.py::test_consolewrite_print_error PASSED [ 4%] rpy2/tests/rinterface/test_callbacks.py::testSetResetConsole PASSED [ 4%] rpy2/tests/rinterface/test_callbacks.py::test_resetconsole_error PASSED [ 4%] rpy2/tests/rinterface/test_callbacks.py::test_flushconsole PASSED [ 4%] rpy2/tests/rinterface/test_callbacks.py::test_flushconsole_with_error PASSED [ 4%] rpy2/tests/rinterface/test_callbacks.py::test_consoleread PASSED [ 4%] rpy2/tests/rinterface/test_callbacks.py::test_consoleread_empty PASSED [ 5%] rpy2/tests/rinterface/test_callbacks.py::test_console_read_with_error PASSED [ 5%] rpy2/tests/rinterface/test_callbacks.py::test_showmessage_default PASSED [ 5%] rpy2/tests/rinterface/test_callbacks.py::test_show_message PASSED [ 5%] rpy2/tests/rinterface/test_callbacks.py::test_show_message_with_error PASSED [ 5%] rpy2/tests/rinterface/test_callbacks.py::test_choosefile_default PASSED [ 5%] rpy2/tests/rinterface/test_callbacks.py::test_choosefile PASSED [ 5%] rpy2/tests/rinterface/test_callbacks.py::test_choosefile_error PASSED [ 5%] rpy2/tests/rinterface/test_callbacks.py::test_showfiles_default PASSED [ 5%] rpy2/tests/rinterface/test_callbacks.py::test_showfiles PASSED [ 6%] rpy2/tests/rinterface/test_callbacks.py::test_showfiles_error PASSED [ 6%] rpy2/tests/rinterface/test_callbacks.py::test_cleanup SKIPPED (WIP (...) 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[ 12%] rpy2/tests/rinterface/test_environment.py::test_new PASSED [ 12%] rpy2/tests/rinterface/test_environment.py::test_globalenv PASSED [ 12%] rpy2/tests/rinterface/test_environment.py::test_getitem PASSED [ 12%] rpy2/tests/rinterface/test_environment.py::test_getitem_invalid PASSED [ 12%] rpy2/tests/rinterface/test_environment.py::test_setitem_invalid PASSED [ 12%] rpy2/tests/rinterface/test_environment.py::test_setitem_baseenv_invalid PASSED [ 12%] rpy2/tests/rinterface/test_environment.py::test_frame PASSED [ 12%] rpy2/tests/rinterface/test_environment.py::test_find_invalid_notstring PASSED [ 12%] rpy2/tests/rinterface/test_environment.py::test_find_invalid_empty PASSED [ 13%] rpy2/tests/rinterface/test_environment.py::test_find_invalid_notfound PASSED [ 13%] rpy2/tests/rinterface/test_environment.py::test_find_closure PASSED [ 13%] rpy2/tests/rinterface/test_environment.py::test_find_vector PASSED [ 13%] rpy2/tests/rinterface/test_environment.py::test_find_environment PASSED [ 13%] rpy2/tests/rinterface/test_environment.py::test_find_functiononly_keyerror PASSED [ 13%] rpy2/tests/rinterface/test_environment.py::test_find_functiononly PASSED [ 13%] rpy2/tests/rinterface/test_environment.py::test_subscript_emptystring PASSED [ 13%] rpy2/tests/rinterface/test_environment.py::test_subscript PASSED [ 14%] rpy2/tests/rinterface/test_environment.py::test_subscript_utf8 PASSED [ 14%] rpy2/tests/rinterface/test_environment.py::test_subscript_missing_utf8 PASSED [ 14%] rpy2/tests/rinterface/test_environment.py::test_length PASSED [ 14%] rpy2/tests/rinterface/test_environment.py::test_iter PASSED [ 14%] rpy2/tests/rinterface/test_environment.py::test_keys PASSED [ 14%] rpy2/tests/rinterface/test_environment.py::test_del PASSED [ 14%] rpy2/tests/rinterface/test_environment.py::test_del_keyerror PASSED [ 14%] rpy2/tests/rinterface/test_environment.py::test_del_baseerror PASSED [ 14%] rpy2/tests/rinterface/test_environment.py::test_enclos_get PASSED [ 15%] rpy2/tests/rinterface/test_environment.py::test_enclos_baseenv_set PASSED [ 15%] rpy2/tests/rinterface/test_environment.py::test_enclos_baseenv_set_invalid PASSED [ 15%] rpy2/tests/rinterface/test_externalptr.py::test_from_pyobject PASSED [ 15%] rpy2/tests/rinterface/test_externalptr.py::test_from_pyobject_new_tag PASSED [ 15%] rpy2/tests/rinterface/test_externalptr.py::test_from_pyobject_invalid_tag PASSED [ 15%] rpy2/tests/rinterface/test_externalptr.py::test_from_pyobject_protected SKIPPED [ 15%] rpy2/tests/rinterface/test_externalptr.py::test_from_pyobject_invalid_protected SKIPPED [ 15%] rpy2/tests/rinterface/test_functions.py::test_new PASSED [ 16%] rpy2/tests/rinterface/test_functions.py::test_typeof PASSED [ 16%] rpy2/tests/rinterface/test_functions.py::test_r_error PASSED [ 16%] rpy2/tests/rinterface/test_functions.py::test_string_argument PASSED [ 16%] rpy2/tests/rinterface/test_functions.py::test_utf8_argument_name PASSED [ 16%] rpy2/tests/rinterface/test_functions.py::test_emptystringparams PASSED [ 16%] rpy2/tests/rinterface/test_functions.py::test_closureenv_isenv PASSED [ 16%] rpy2/tests/rinterface/test_functions.py::test_closureenv PASSED [ 16%] rpy2/tests/rinterface/test_functions.py::test_call_s4_setClass PASSED [ 16%] rpy2/tests/rinterface/test_functions.py::test_call_OrdDict PASSED [ 17%] rpy2/tests/rinterface/test_functions.py::test_call_OrdDictEnv PASSED [ 17%] rpy2/tests/rinterface/test_functions.py::test_error_in_call PASSED [ 17%] rpy2/tests/rinterface/test_functions.py::test_missing_arg PASSED [ 17%] rpy2/tests/rinterface/test_functions.py::test_scalar_convert_integer PASSED [ 17%] rpy2/tests/rinterface/test_functions.py::test_scalar_convert_double PASSED [ 17%] rpy2/tests/rinterface/test_functions.py::test_scalar_convert_boolean PASSED [ 17%] rpy2/tests/rinterface/test_functions.py::test_call_in_context[True-True] PASSED [ 17%] rpy2/tests/rinterface/test_functions.py::test_call_in_context[True-False] PASSED [ 17%] rpy2/tests/rinterface/test_functions.py::test_call_in_context[False-True] PASSED [ 18%] rpy2/tests/rinterface/test_functions.py::test_call_in_context[False-False] PASSED [ 18%] rpy2/tests/rinterface/test_functions.py::test_call_in_context_nested[True] PASSED [ 18%] rpy2/tests/rinterface/test_functions.py::test_call_in_context_nested[False] PASSED [ 18%] rpy2/tests/rinterface/test_memorymanagement.py::test_rmemory_manager PASSED [ 18%] rpy2/tests/rinterface/test_memorymanagement.py::test_rmemory_manager_unprotect PASSED [ 18%] rpy2/tests/rinterface/test_memorymanagement.py::test_rmemory_manager_unprotect_invalid PASSED [ 18%] rpy2/tests/rinterface/test_na.py::test_r_to_NAInteger PASSED [ 18%] rpy2/tests/rinterface/test_na.py::test_NAInteger_repr PASSED [ 19%] rpy2/tests/rinterface/test_na.py::test_NAInteger_str PASSED [ 19%] rpy2/tests/rinterface/test_na.py::test_NAInteger_to_r PASSED [ 19%] rpy2/tests/rinterface/test_na.py::test_bool_NAInteger PASSED [ 19%] rpy2/tests/rinterface/test_na.py::test_NAInteger_binaryfunc SKIPPED [ 19%] rpy2/tests/rinterface/test_na.py::test_NAInteger_in_vector PASSED [ 19%] rpy2/tests/rinterface/test_na.py::test_R_to_NALogical PASSED [ 19%] rpy2/tests/rinterface/test_na.py::test_NALogical_repr PASSED [ 19%] rpy2/tests/rinterface/test_na.py::test_NALogical_str PASSED [ 19%] rpy2/tests/rinterface/test_na.py::test_bool_NALogical PASSED [ 20%] rpy2/tests/rinterface/test_na.py::test_NALogical_to_r PASSED [ 20%] rpy2/tests/rinterface/test_na.py::test_NALogical_in_vector PASSED [ 20%] rpy2/tests/rinterface/test_na.py::test_R_to_NAReal PASSED [ 20%] rpy2/tests/rinterface/test_na.py::test_NAReal_to_r PASSED [ 20%] rpy2/tests/rinterface/test_na.py::test_bool_NAReal PASSED [ 20%] rpy2/tests/rinterface/test_na.py::test_NAReal_binaryfunc PASSED [ 20%] rpy2/tests/rinterface/test_na.py::test_NAReal_in_vector PASSED [ 20%] rpy2/tests/rinterface/test_na.py::test_NAReal_repr PASSED [ 21%] rpy2/tests/rinterface/test_na.py::test_NAReal_str PASSED [ 21%] rpy2/tests/rinterface/test_na.py::test_r_to_NACharacter PASSED [ 21%] rpy2/tests/rinterface/test_na.py::test_NACharacter_repr PASSED [ 21%] rpy2/tests/rinterface/test_na.py::test_NACharacter_str PASSED [ 21%] rpy2/tests/rinterface/test_na.py::test_NACharacter_to_r PASSED [ 21%] rpy2/tests/rinterface/test_na.py::test_NACharacter_in_vector PASSED [ 21%] rpy2/tests/rinterface/test_na.py::test_R_to_NAComplex PASSED [ 21%] rpy2/tests/rinterface/test_na.py::test_NAComplex_to_r PASSED [ 21%] rpy2/tests/rinterface/test_na.py::test_bool_NAComplex PASSED [ 22%] rpy2/tests/rinterface/test_noinitialization.py::test_set_initoptions SKIPPED [ 22%] rpy2/tests/rinterface/test_noinitialization.py::test_assert_isready SKIPPED [ 22%] rpy2/tests/rinterface/test_noinitialization.py::test_assert_environment_geitem SKIPPED [ 22%] rpy2/tests/rinterface/test_noinitialization.py::test_assert_rternalize SKIPPED [ 22%] rpy2/tests/rinterface/test_openrlib.py::test_dlopen_invalid PASSED [ 22%] rpy2/tests/rinterface/test_openrlib.py::test_get_symbol_or_fallback PASSED [ 22%] rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[IntSexpVector-value0-INTEGER_ELT-_get_integer_elt_fallback] PASSED [ 22%] rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[BoolSexpVector-value1-LOGICAL_ELT-_get_logical_elt_fallback] PASSED [ 23%] rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[FloatSexpVector-value2-REAL_ELT-_get_real_elt_fallback] PASSED [ 23%] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[IntSexpVector-value0-_set_integer_elt_fallback-_get_integer_elt_fallback] PASSED [ 23%] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[BoolSexpVector-value1-_set_logical_elt_fallback-_get_logical_elt_fallback] PASSED [ 23%] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[FloatSexpVector-value2-_set_real_elt_fallback-_get_real_elt_fallback] PASSED [ 23%] rpy2/tests/rinterface/test_sexp.py::test_invalid_init PASSED [ 23%] rpy2/tests/rinterface/test_sexp.py::test_init_from_existing PASSED [ 23%] rpy2/tests/rinterface/test_sexp.py::test_typeof PASSED [ 23%] rpy2/tests/rinterface/test_sexp.py::test_get PASSED [ 23%] rpy2/tests/rinterface/test_sexp.py::test_list_attrs[IntSexpVector] PASSED [ 24%] rpy2/tests/rinterface/test_sexp.py::test_list_attrs[ListSexpVector] PASSED [ 24%] rpy2/tests/rinterface/test_sexp.py::test_do_slot PASSED [ 24%] rpy2/tests/rinterface/test_sexp.py::test_names PASSED [ 24%] rpy2/tests/rinterface/test_sexp.py::test_names_set PASSED [ 24%] rpy2/tests/rinterface/test_sexp.py::test_names_set_invalid PASSED [ 24%] rpy2/tests/rinterface/test_sexp.py::test_do_slot_missing PASSED [ 24%] rpy2/tests/rinterface/test_sexp.py::test_do_slot_not_string PASSED [ 24%] rpy2/tests/rinterface/test_sexp.py::test_do_slot_empty_string PASSED [ 25%] rpy2/tests/rinterface/test_sexp.py::test_do_slot_assign_create PASSED [ 25%] rpy2/tests/rinterface/test_sexp.py::test_do_slot_reassign PASSED [ 25%] rpy2/tests/rinterface/test_sexp.py::test_do_slot_assign_empty_string PASSED [ 25%] rpy2/tests/rinterface/test_sexp.py::test_sexp_rsame_true PASSED [ 25%] rpy2/tests/rinterface/test_sexp.py::test_sexp_rsame_false PASSED [ 25%] rpy2/tests/rinterface/test_sexp.py::test_sexp_rsame_invalid PASSED [ 25%] rpy2/tests/rinterface/test_sexp.py::test___sexp__ PASSED [ 25%] rpy2/tests/rinterface/test_sexp.py::test_rclass_get PASSED [ 25%] rpy2/tests/rinterface/test_sexp.py::test_rclass_get_sym PASSED [ 26%] rpy2/tests/rinterface/test_sexp.py::test_rclass_set PASSED [ 26%] rpy2/tests/rinterface/test_sexp.py::test_rclass_set_invalid PASSED [ 26%] rpy2/tests/rinterface/test_sexp.py::test__sexp__wrongtypeof PASSED [ 26%] rpy2/tests/rinterface/test_sexp.py::test__sexp__set PASSED [ 26%] rpy2/tests/rinterface/test_sexp.py::test_deepcopy XFAIL (WIP) [ 26%] rpy2/tests/rinterface/test_sexp.py::test_rid PASSED [ 26%] rpy2/tests/rinterface/test_sexp.py::test_NULL_nonzero PASSED [ 26%] rpy2/tests/rinterface/test_sexp.py::test_charsxp_encoding PASSED [ 26%] rpy2/tests/rinterface/test_sexp.py::test_charsxp_nchar PASSED [ 27%] rpy2/tests/rinterface/test_sexp.py::test_missingtype PASSED [ 27%] rpy2/tests/rinterface/test_symbol.py::test_new_invalid PASSED [ 27%] rpy2/tests/rinterface/test_symbol.py::test_new_missing PASSED [ 27%] rpy2/tests/rinterface/test_symbol.py::test_new_fromstring PASSED [ 27%] rpy2/tests/rinterface/test_symbol.py::test_new_str PASSED [ 27%] rpy2/tests/rinterface/test_threading.py::test_threading__initr SKIPPED [ 27%] rpy2/tests/rinterface/test_threading.py::test_threading_initr_simple SKIPPED [ 27%] rpy2/tests/rinterface/test_vector_bool.py::test_init_from_seqr PASSED [ 28%] rpy2/tests/rinterface/test_vector_bool.py::test_from_int_memoryview PASSED [ 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rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_mixed SKIPPED [ 79%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_bool[None-0-bool-data0] SKIPPED [ 79%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_bool[None-0-bool-data1] SKIPPED [ 80%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_bool[None-0-None-data0] SKIPPED [ 80%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_bool[None-0-None-data1] SKIPPED [ 80%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_bool[None-1-bool-data0] SKIPPED [ 80%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_bool[None-1-bool-data1] SKIPPED [ 80%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_bool[None-1-None-data0] SKIPPED [ 80%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_bool[None-1-None-data1] SKIPPED [ 80%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_float[float-data0] SKIPPED [ 80%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_float[float-data1] SKIPPED [ 80%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_float[None-data0] SKIPPED [ 81%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_float[None-data1] SKIPPED [ 81%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_obj_allnone SKIPPED [ 81%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_series_issue264 SKIPPED [ 81%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_object2String SKIPPED [ 81%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_object2String_with_None SKIPPED [ 81%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_factor2Category SKIPPED [ 81%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_factorwithNA2Category SKIPPED [ 81%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_orderedFactor2Category SKIPPED [ 82%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_category2Factor SKIPPED [ 82%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_categorywithNA2Factor SKIPPED [ 82%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_orderedCategory2Factor SKIPPED [ 82%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_datetime2posixct SKIPPED [ 82%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_datetime2posixct_withNA SKIPPED [ 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rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test__records_to_columns[list(list(x=1, y=3), list(x=2, y=4))-names0-values0] SKIPPED [ 83%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test__records_to_columns[list(list(x=1), list(x=2, y=4))-names1-values1] SKIPPED [ 83%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test__flatten_dataframe[data.frame( a = c("a", "b"), b = c(1, 2))-names0-values0] SKIPPED [ 83%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test__flatten_dataframe[data.frame( a = c("a", "b"), b = I(list(list(x=1, y=3), list(x=2, y=4))))-names1-values1] SKIPPED [ 83%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_dataframe_with_list[data.frame( a = c("a", "b"), b = I(list(list(x=1, y=3), list(x=2, y=4))))-names0-values0] SKIPPED [ 84%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_dataframe_with_list[data.frame( b = I(list(list(x=1, y=3), list(x=2, y=4))))-names1-values1] SKIPPED [ 84%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_dataframe_with_list[aggregate(gear ~ am, mtcars, function(x) c(mean = mean(x), sd = sd(x)), simplify=FALSE)-names2-values2] SKIPPED [ 84%] rpy2/tests/robjects/test_pandas_conversions.py::TestPandasConversions::test_ri2pandas_issue207 SKIPPED [ 84%] rpy2/tests/robjects/test_robjects.py::test_getitem PASSED [ 84%] rpy2/tests/robjects/test_robjects.py::test_eval PASSED [ 84%] rpy2/tests/robjects/test_robjects.py::test_items PASSED [ 84%] rpy2/tests/robjects/test_robjects.py::test_values PASSED [ 84%] rpy2/tests/robjects/test_robjects.py::test_init PASSED [ 85%] rpy2/tests/robjects/test_robjects.py::test_r_repr PASSED [ 85%] rpy2/tests/robjects/test_robjects.py::test_str PASSED [ 85%] rpy2/tests/robjects/test_robjects.py::test_rclass PASSED [ 85%] rpy2/tests/robjects/test_robjects.py::test_rclass_set PASSED [ 85%] rpy2/tests/robjects/test_robjects.py::test_rclass_set_usingstring PASSED [ 85%] rpy2/tests/robjects/test_robjects.py::test_rclass_str PASSED [ 85%] rpy2/tests/robjects/test_robjects.py::test_do_slot PASSED [ 85%] rpy2/tests/robjects/test_robjects.py::test_slots PASSED [ 85%] rpy2/tests/robjects/test_rs4.py::test_slotnames PASSED [ 86%] rpy2/tests/robjects/test_rs4.py::test_isclass PASSED [ 86%] rpy2/tests/robjects/test_rs4.py::test_validobject PASSED [ 86%] rpy2/tests/robjects/test_serialization.py::test_pickle PASSED [ 86%] rpy2/tests/robjects/test_translated_function.py::test_init_invalid PASSED [ 86%] rpy2/tests/robjects/test_translated_function.py::test_init PASSED [ 86%] rpy2/tests/robjects/test_translated_function.py::test_init_with_translation PASSED [ 86%] rpy2/tests/robjects/test_translated_function.py::test_call PASSED [ 86%] rpy2/tests/robjects/test_vector.py::test_init PASSED [ 87%] rpy2/tests/robjects/test_vector.py::test_vector_navalue[StrVector-expected_na0] PASSED [ 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rpy2/tests/robjects/test_vector.py::test_strvector_factor PASSED [ 88%] rpy2/tests/robjects/test_vector.py::test_add_operator PASSED [ 88%] rpy2/tests/robjects/test_vector.py::test_r_add_operator PASSED [ 88%] rpy2/tests/robjects/test_vector.py::test_r_sub_operator PASSED [ 88%] rpy2/tests/robjects/test_vector.py::test_r_mult_operator PASSED [ 89%] rpy2/tests/robjects/test_vector.py::test_r_matmul_operator PASSED [ 89%] rpy2/tests/robjects/test_vector.py::test_r_power_operator PASSED [ 89%] rpy2/tests/robjects/test_vector.py::test_r_truediv PASSED [ 89%] rpy2/tests/robjects/test_vector.py::test_r_floor_division PASSED [ 89%] rpy2/tests/robjects/test_vector.py::test_r_mod PASSED [ 89%] rpy2/tests/robjects/test_vector.py::test_r_and PASSED [ 89%] rpy2/tests/robjects/test_vector.py::test_r_or PASSED [ 89%] rpy2/tests/robjects/test_vector.py::test_r_invert PASSED [ 89%] rpy2/tests/robjects/test_vector.py::test_r_lt PASSED [ 90%] rpy2/tests/robjects/test_vector.py::test_r_le PASSED [ 90%] rpy2/tests/robjects/test_vector.py::test_r_gt PASSED [ 90%] rpy2/tests/robjects/test_vector.py::test_r_ge PASSED [ 90%] rpy2/tests/robjects/test_vector.py::test_r_eq PASSED [ 90%] rpy2/tests/robjects/test_vector.py::test_r_ne PASSED [ 90%] rpy2/tests/robjects/test_vector.py::test_r_neg PASSED [ 90%] rpy2/tests/robjects/test_vector.py::test_contains PASSED [ 90%] rpy2/tests/robjects/test_vector.py::test_getitem_int[StrVector-values0] PASSED [ 91%] rpy2/tests/robjects/test_vector.py::test_getitem_int[IntVector-values1] PASSED [ 91%] rpy2/tests/robjects/test_vector.py::test_getitem_int[FloatVector-values2] PASSED [ 91%] rpy2/tests/robjects/test_vector.py::test_getitem_int[BoolVector-values3] PASSED [ 91%] rpy2/tests/robjects/test_vector.py::test_getitem_outofbounds PASSED [ 91%] rpy2/tests/robjects/test_vector.py::test_getitem_invalidtype[StrVector-values0] PASSED [ 91%] rpy2/tests/robjects/test_vector.py::test_getitem_invalidtype[IntVector-values1] PASSED [ 91%] rpy2/tests/robjects/test_vector.py::test_getitem_invalidtype[FloatVector-values2] PASSED [ 91%] rpy2/tests/robjects/test_vector.py::test_getitem_invalidtype[BoolVector-values3] PASSED [ 91%] rpy2/tests/robjects/test_vector.py::test_setitem PASSED [ 92%] rpy2/tests/robjects/test_vector.py::test_setitem_outofbounds PASSED [ 92%] rpy2/tests/robjects/test_vector.py::test_setitem_invalidtype[StrVector-values0] PASSED [ 92%] rpy2/tests/robjects/test_vector.py::test_setitem_invalidtype[IntVector-values1] PASSED [ 92%] rpy2/tests/robjects/test_vector.py::test_setitem_invalidtype[FloatVector-values2] PASSED [ 92%] rpy2/tests/robjects/test_vector.py::test_setitem_invalidtype[BoolVector-values3] PASSED [ 92%] rpy2/tests/robjects/test_vector.py::test_getnames PASSED [ 92%] rpy2/tests/robjects/test_vector.py::test_setnames PASSED [ 92%] rpy2/tests/robjects/test_vector.py::test_nainteger PASSED [ 92%] rpy2/tests/robjects/test_vector.py::test_tabulate PASSED [ 93%] rpy2/tests/robjects/test_vector.py::test_nareal PASSED [ 93%] rpy2/tests/robjects/test_vector.py::test_nalogical PASSED [ 93%] rpy2/tests/robjects/test_vector.py::test_nacomplex XPASS (Edge case ...) [ 93%] rpy2/tests/robjects/test_vector.py::test_nacomplex_workaround PASSED [ 93%] rpy2/tests/robjects/test_vector.py::test_nacharacter PASSED [ 93%] rpy2/tests/robjects/test_vector.py::test_int_repr PASSED [ 93%] rpy2/tests/robjects/test_vector.py::test_list_repr PASSED [ 93%] rpy2/tests/robjects/test_vector.py::test_float_repr PASSED [ 94%] rpy2/tests/robjects/test_vector.py::test_repr_html[params0] PASSED [ 94%] rpy2/tests/robjects/test_vector.py::test_repr_html[params1] PASSED [ 94%] rpy2/tests/robjects/test_vector.py::test_repr_html[params2] PASSED [ 94%] rpy2/tests/robjects/test_vector.py::test_repr_html[params3] PASSED [ 94%] rpy2/tests/robjects/test_vector.py::test_repr_nonvectorinlist PASSED [ 94%] rpy2/tests/robjects/test_vector.py::test_items PASSED [ 94%] rpy2/tests/robjects/test_vector.py::test_itemsnonames PASSED [ 94%] rpy2/tests/robjects/test_vector.py::test_sequence_to_vector PASSED [ 94%] rpy2/tests/robjects/test_vector.py::test_sample PASSED [ 95%] rpy2/tests/robjects/test_vector.py::test_sample_probabilities PASSED [ 95%] rpy2/tests/robjects/test_vector.py::test_sample_probabilities_novector PASSED [ 95%] rpy2/tests/robjects/test_vector.py::test_sample_probabilities_error_len PASSED [ 95%] rpy2/tests/robjects/test_vector.py::test_sample_error PASSED [ 95%] rpy2/tests/robjects/test_vector.py::test_sample_replacement PASSED [ 95%] rpy2/tests/robjects/test_vector_datetime.py::test_POSIXlt_from_invalidpythontime PASSED [ 95%] rpy2/tests/robjects/test_vector_datetime.py::test_POSIXlt_from_pythontime PASSED [ 95%] rpy2/tests/robjects/test_vector_datetime.py::test_POSIXlt_getitem XFAIL [ 96%] rpy2/tests/robjects/test_vector_datetime.py::testPOSIXlt_repr PASSED [ 96%] rpy2/tests/robjects/test_vector_datetime.py::test_POSIXct_from_invalidpythontime PASSED [ 96%] rpy2/tests/robjects/test_vector_datetime.py::test_POSIXct_from_invalidobject PASSED [ 96%] rpy2/tests/robjects/test_vector_datetime.py::test_POSIXct_from_python_times[None-x0] PASSED [ 96%] rpy2/tests/robjects/test_vector_datetime.py::test_POSIXct_from_python_times[None-x1] PASSED [ 96%] rpy2/tests/robjects/test_vector_datetime.py::test_POSIXct_datetime_from_timestamp[None] PASSED [ 96%] rpy2/tests/robjects/test_vector_datetime.py::test_POSIXct_from_python_times[America/New_York-x0] PASSED [ 96%] rpy2/tests/robjects/test_vector_datetime.py::test_POSIXct_from_python_times[America/New_York-x1] PASSED [ 96%] rpy2/tests/robjects/test_vector_datetime.py::test_POSIXct_datetime_from_timestamp[America/New_York] PASSED [ 97%] rpy2/tests/robjects/test_vector_datetime.py::test_POSIXct_from_python_times[Australia/Sydney-x0] PASSED [ 97%] rpy2/tests/robjects/test_vector_datetime.py::test_POSIXct_from_python_times[Australia/Sydney-x1] PASSED [ 97%] rpy2/tests/robjects/test_vector_datetime.py::test_POSIXct_datetime_from_timestamp[Australia/Sydney] PASSED [ 97%] rpy2/tests/robjects/test_vector_datetime.py::test_POSIXct_from_python_timezone[America/New_York] PASSED [ 97%] rpy2/tests/robjects/test_vector_datetime.py::test_POSIXct_from_python_timezone[Australia/Sydney] PASSED [ 97%] rpy2/tests/robjects/test_vector_datetime.py::testPOSIXct_fromSexp PASSED [ 97%] rpy2/tests/robjects/test_vector_datetime.py::testPOSIXct_repr PASSED [ 97%] rpy2/tests/robjects/test_vector_datetime.py::testPOSIXct_getitem PASSED [ 98%] rpy2/tests/robjects/test_vector_datetime.py::testPOSIXct_iter_localized_datetime PASSED [ 98%] rpy2/tests/robjects/test_vector_extractdelegator.py::test_extract_getitem_by_index PASSED [ 98%] rpy2/tests/robjects/test_vector_extractdelegator.py::test_extract_by_index PASSED [ 98%] rpy2/tests/robjects/test_vector_extractdelegator.py::test_extract_by_name PASSED [ 98%] rpy2/tests/robjects/test_vector_extractdelegator.py::test_extract_silent_index_error PASSED [ 98%] rpy2/tests/robjects/test_vector_extractdelegator.py::test_replace PASSED [ 98%] rpy2/tests/robjects/test_vector_extractdelegator.py::test_extract_recycling_rule PASSED [ 98%] rpy2/tests/robjects/test_vector_extractdelegator.py::test_extract_list PASSED [ 98%] rpy2/tests/robjects/test_vector_factor.py::test_init PASSED [ 99%] rpy2/tests/robjects/test_vector_factor.py::test_factor_repr PASSED [ 99%] rpy2/tests/robjects/test_vector_factor.py::test_isordered PASSED [ 99%] rpy2/tests/robjects/test_vector_factor.py::test_nlevels PASSED [ 99%] rpy2/tests/robjects/test_vector_factor.py::test_levels PASSED [ 99%] rpy2/tests/robjects/test_vector_factor.py::test_levels_set PASSED [ 99%] rpy2/tests/robjects/test_vector_factor.py::test_iter_labels[abaac-abaac] PASSED [ 99%] rpy2/tests/robjects/test_vector_factor.py::test_iter_labels[values1-check_values1] PASSED [ 99%] rpy2/tests/robjects/test_vector_factor.py::test_factor_with_attrs PASSED [100%] =============================== warnings summary =============================== rpy2/tests/ipython/test_html.py:10 /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.17/rpy2/tests/ipython/test_html.py:10: UserWarning: No module named 'IPython' warnings.warn(str(no_ipython)) rpy2/tests/ipython/test_rmagic.py:29 /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.17/rpy2/tests/ipython/test_rmagic.py:29: UserWarning: No module named 'IPython' warnings.warn(str(no_ipython)) rpy2/tests/ipython/test_rmagic.py:48 /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.17/rpy2/tests/ipython/test_rmagic.py:48: PytestRemovedIn9Warning: Marks applied to fixtures have no effect See docs: https://docs.pytest.org/en/stable/deprecations.html#applying-a-mark-to-a-fixture-function @pytest.mark.skipif(IPython is None, rpy2/rinterface.py:1189 rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[IntSexpVector-value0-INTEGER_ELT-_get_integer_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[BoolSexpVector-value1-LOGICAL_ELT-_get_logical_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[FloatSexpVector-value2-REAL_ELT-_get_real_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[IntSexpVector-value0-_set_integer_elt_fallback-_get_integer_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[BoolSexpVector-value1-_set_logical_elt_fallback-_get_logical_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[FloatSexpVector-value2-_set_real_elt_fallback-_get_real_elt_fallback] /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.17/rpy2/rinterface.py:1189: UserWarning: Environment variable "LD_LIBRARY_PATH" redefined by R and overriding existing variable. warnings.warn( rpy2/rinterface.py:1189 rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[IntSexpVector-value0-INTEGER_ELT-_get_integer_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[BoolSexpVector-value1-LOGICAL_ELT-_get_logical_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[FloatSexpVector-value2-REAL_ELT-_get_real_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[IntSexpVector-value0-_set_integer_elt_fallback-_get_integer_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[BoolSexpVector-value1-_set_logical_elt_fallback-_get_logical_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[FloatSexpVector-value2-_set_real_elt_fallback-_get_real_elt_fallback] /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.17/rpy2/rinterface.py:1189: UserWarning: Environment variable "SHLVL" redefined by R and overriding existing variable. warnings.warn( rpy2/rinterface.py:1189 rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[IntSexpVector-value0-INTEGER_ELT-_get_integer_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[BoolSexpVector-value1-LOGICAL_ELT-_get_logical_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_get_vec_elt_fallback[FloatSexpVector-value2-REAL_ELT-_get_real_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[IntSexpVector-value0-_set_integer_elt_fallback-_get_integer_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[BoolSexpVector-value1-_set_logical_elt_fallback-_get_logical_elt_fallback] rpy2/tests/rinterface/test_openrlib.py::test_set_vec_elt_fallback[FloatSexpVector-value2-_set_real_elt_fallback-_get_real_elt_fallback] /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.17/rpy2/rinterface.py:1189: UserWarning: Environment variable "R_SESSION_TMPDIR" redefined by R and overriding existing variable. warnings.warn( rpy2/tests/robjects/test_dataframe.py: 6 warnings rpy2/tests/robjects/test_language.py: 2 warnings rpy2/tests/robjects/test_vector.py: 6 warnings rpy2/tests/robjects/test_vector_factor.py: 5 warnings /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.17/rpy2/robjects/conversion.py:28: DeprecationWarning: The use of rpy2py in module rpy2.robjects.conversion is deprecated. Use rpy2.robjects.conversion.get_conversion() instead of rpy2.robjects.conversion.converter. warnings.warn( rpy2/tests/robjects/test_language.py::test_eval /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.17/rpy2/robjects/language.py:50: DeprecationWarning: This function is deprecated. Use evaluation_context directly. envir = ri.get_evaluation_context() rpy2/tests/robjects/test_vector_datetime.py::test_POSIXct_datetime_from_timestamp[None] /usr/lib/python3.12/site-packages/tzlocal/unix.py:198: UserWarning: Can not find any timezone configuration, defaulting to UTC. warnings.warn("Can not find any timezone configuration, defaulting to UTC.") -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html = 689 passed, 164 skipped, 3 deselected, 2 xfailed, 1 xpassed, 45 warnings in 19.19s = >>> py3-rpy2: Entering fakeroot... >>> py3-rpy2-pyc*: Running split function pyc... 'usr/lib/python3.12/site-packages/rpy2/tests/rinterface/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/tests/rinterface/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/tests/ipython/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/tests/ipython/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/tests/rlike/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/tests/rlike/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/tests/robjects/lib/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/tests/robjects/lib/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/tests/robjects/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/tests/robjects/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/tests/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/tests/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/ipython/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/ipython/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/rinterface_lib/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/rinterface_lib/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/rlike/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/rlike/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/robjects/lib/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/robjects/lib/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/robjects/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/robjects/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/interactive/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/interactive/__pycache__' 'usr/lib/python3.12/site-packages/rpy2/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/rpy2/__pycache__' 'usr/lib/python3.12/site-packages/__pycache__' -> '/home/buildozer/aports/community/py3-rpy2/pkg/py3-rpy2-pyc/usr/lib/python3.12/site-packages/__pycache__' >>> py3-rpy2-pyc*: Preparing subpackage py3-rpy2-pyc... >>> py3-rpy2-pyc*: Running postcheck for py3-rpy2-pyc >>> py3-rpy2*: Running postcheck for py3-rpy2 >>> py3-rpy2*: Preparing package py3-rpy2... >>> py3-rpy2*: Stripping binaries >>> py3-rpy2-pyc*: Scanning shared objects >>> py3-rpy2*: Scanning shared objects >>> py3-rpy2-pyc*: Tracing dependencies... py3-cffi py3-numpy py3-tz py3-tzlocal py3-jinja2 R python3~3.12 >>> py3-rpy2-pyc*: Package size: 1.1 MB >>> py3-rpy2-pyc*: Compressing data... >>> py3-rpy2-pyc*: Create checksum... >>> py3-rpy2-pyc*: Create py3-rpy2-pyc-3.5.17-r1.apk >>> py3-rpy2*: Tracing dependencies... py3-cffi py3-numpy py3-tz py3-tzlocal py3-jinja2 R python3~3.12 so:libR.so so:libc.musl-x86_64.so.1 >>> py3-rpy2*: Package size: 886.6 KB >>> py3-rpy2*: Compressing data... >>> py3-rpy2*: Create checksum... >>> py3-rpy2*: Create py3-rpy2-3.5.17-r1.apk >>> py3-rpy2: Build complete at Thu, 15 May 2025 09:47:36 +0000 elapsed time 0h 0m 29s >>> py3-rpy2: Cleaning up srcdir >>> py3-rpy2: Cleaning up pkgdir >>> py3-rpy2: Uninstalling dependencies... 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