>>> avida: Building testing/avida 0_git20190813-r1 (using abuild 3.10.0_rc1-r2) started Tue, 25 Oct 2022 02:36:36 +0000 >>> avida: Checking sanity of /home/buildozer/aports/testing/avida/APKBUILD... >>> avida: Analyzing dependencies... >>> avida: Installing for build: build-base cmake linux-headers samurai (1/9) Installing libbz2 (1.0.8-r3) (2/9) Installing xz-libs (5.2.7-r0) (3/9) Installing libarchive (3.6.1-r1) (4/9) Installing rhash-libs (1.4.3-r1) (5/9) Installing libuv (1.44.2-r0) (6/9) Installing cmake (3.24.2-r0) (7/9) Installing linux-headers (5.19.5-r0) (8/9) Installing samurai (1.2-r2) (9/9) Installing .makedepends-avida (20221025.023638) Executing busybox-1.35.0-r27.trigger OK: 455 MiB in 107 packages >>> avida: Cleaning up srcdir >>> avida: Cleaning up pkgdir >>> avida: Fetching https://distfiles.alpinelinux.org/distfiles/edge/avida-0_git20190813.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 7801k 100 7801k 0 0 29.0M 0 --:--:-- --:--:-- --:--:-- 29.0M >>> avida: Fetching https://distfiles.alpinelinux.org/distfiles/edge/apto.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 319k 100 319k 0 0 1937k 0 --:--:-- --:--:-- --:--:-- 1937k >>> avida: Fetching https://distfiles.alpinelinux.org/distfiles/edge/avida-0_git20190813.tar.gz >>> avida: Fetching https://distfiles.alpinelinux.org/distfiles/edge/apto.tar.gz >>> avida: Checking sha512sums... avida-0_git20190813.tar.gz: OK apto.tar.gz: OK 10-remove-forced-tcmalloc.patch: OK musl123.patch: OK >>> avida: Unpacking /var/cache/distfiles/edge/avida-0_git20190813.tar.gz... >>> avida: Unpacking /var/cache/distfiles/edge/apto.tar.gz... >>> avida: 10-remove-forced-tcmalloc.patch patching file CMakeLists.txt patching file avida-core/CMakeLists.txt >>> avida: musl123.patch patching file avida-core/source/cpu/cTestCPUInterface.cc -- The C compiler identification is GNU 12.2.1 -- The CXX compiler identification is GNU 12.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Deprecation Warning at CMakeLists.txt:3 (CMAKE_MINIMUM_REQUIRED): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at libs/apto/CMakeLists.txt:3 (CMAKE_MINIMUM_REQUIRED): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Warning (dev) in CMakeLists.txt: A logical block opening on the line /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/CMakeLists.txt:20 (IF) closes on the line /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/CMakeLists.txt:22 (ENDIF) with mis-matching arguments. This warning is for project developers. Use -Wno-dev to suppress it. CMake Deprecation Warning at avida-core/CMakeLists.txt:3 (CMAKE_MINIMUM_REQUIRED): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Configuring done -- Generating done -- Build files have been written to: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/build [1/204] Building CXX object avida-core/CMakeFiles/unit-tests.dir/source/tools/cBitArray.cc.o [2/204] Building CXX object avida-core/CMakeFiles/unit-tests.dir/source/targets/unit-tests/main.cc.o [3/204] Building CXX object avida-core/CMakeFiles/avida.dir/source/targets/avida/Avida2Driver.cc.o [4/204] Building CXX object avida-core/CMakeFiles/avida.dir/source/targets/avida/primitive.cc.o [5/204] Building CXX object avida-core/CMakeFiles/viewer.dir/source/viewer/OrganismTrace.cc.o [6/204] Building CXX object avida-core/CMakeFiles/viewer.dir/source/viewer/Map.cc.o [7/204] Building CXX object avida-core/CMakeFiles/viewer.dir/source/viewer/Listener.cc.o [8/204] Building CXX object avida-core/CMakeFiles/viewer.dir/source/viewer/GraphicsContext.cc.o [9/204] Building CXX object avida-core/CMakeFiles/viewer.dir/source/viewer/Freezer.cc.o [10/204] Building CXX object avida-core/CMakeFiles/viewer.dir/source/viewer/Driver.cc.o [11/204] Building CXX object avida-core/CMakeFiles/viewer.dir/source/viewer/Color.cc.o [12/204] Building CXX object avida-core/CMakeFiles/viewer.dir/source/viewer/ClassificationInfo.cc.o [13/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/util/GenomeLoader.cc.o [14/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/util/CmdLine.cc.o [15/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/tools/cStringUtil.cc.o [16/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/tools/cStringList.cc.o [17/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/tools/cStringIterator.cc.o [18/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/tools/cString.cc.o [19/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/tools/cRunningAverage.cc.o [20/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/tools/cOrderedWeightedIndex.cc.o [21/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/tools/cMerit.cc.o [22/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/tools/cInitFile.cc.o [23/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/tools/cHistogram.cc.o [24/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/tools/cFile.cc.o [25/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/tools/cDataManager_Base.cc.o [26/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/tools/cBitArray.cc.o [27/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/tools/cArgSchema.cc.o [28/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/tools/cArgContainer.cc.o [29/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/systematics/Unit.cc.o [30/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/systematics/SexualAncestry.cc.o [31/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/systematics/Manager.cc.o [32/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/systematics/Group.cc.o [33/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/systematics/GenotypeArbiter.cc.o [34/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/systematics/Genotype.cc.o [35/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/systematics/GenomeTestMetrics.cc.o [36/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/systematics/CladeArbiter.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/viewer/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/viewer/Listener.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/viewer/Listener.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [37/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/systematics/Clade.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/viewer/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/viewer/GraphicsContext.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/viewer/GraphicsContext.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [38/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/systematics/Arbiter.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/systematics/Group.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/systematics/Group.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [39/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/output/Socket.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cStringIterator.h:27, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cStringIterator.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [40/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/output/Manager.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cOrderedWeightedIndex.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cOrderedWeightedIndex.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [41/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/output/File.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cFile.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cFile.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [42/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cWorld.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/World.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/systematics/Manager.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/systematics/Manager.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [43/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cTaskLib.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/output/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cDataManager_Base.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cDataManager_Base.cc:11: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [44/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cStats.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cArgSchema.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cArgSchema.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [45/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cSpatialResCount.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cStringList.h:27, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cStringList.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [46/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cSpatialCountElem.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cBitArray.h:4, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cBitArray.cc:1: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [47/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cResourceLib.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cBitArray.h:4, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cBitArray.cc:1: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [48/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cResourceHistory.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/systematics/Unit.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/systematics/Unit.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [49/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cResourceCount.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/systematics/Group.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/private/avida/private/systematics/SexualAncestry.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/systematics/SexualAncestry.cc:24: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [50/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cResource.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cStringUtil.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cStringUtil.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [51/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cReactionResult.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cBitArray.h:4, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/targets/unit-tests/main.cc:54: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/string:48, from /usr/include/c++/12.2.1/bits/locale_classes.h:40, from /usr/include/c++/12.2.1/bits/ios_base.h:41, from /usr/include/c++/12.2.1/ios:42, from /usr/include/c++/12.2.1/ostream:38, from /usr/include/c++/12.2.1/iostream:39, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/targets/unit-tests/main.cc:22: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [52/204] Linking CXX executable bin/unit-tests [53/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cReactionLib.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cArgContainer.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cArgContainer.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [54/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cReaction.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/systematics/Group.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/viewer/ClassificationInfo.h:51, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/viewer/ClassificationInfo.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [55/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cPopulationInterface.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [56/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cPopulationCell.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/output/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/output/Socket.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/output/Socket.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [57/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cPopulation.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/systematics/Arbiter.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/systematics/Arbiter.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [58/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cPlasticPhenotype.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cSpatialCountElem.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cSpatialCountElem.cc:26: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [59/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cPhenPlastUtil.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cInitFile.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cInitFile.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [60/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cPhenPlastGenotype.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/util/CmdLine.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/util/CmdLine.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [61/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cPhenotype.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/private/avida/private/util/GenomeLoader.h:27, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/util/GenomeLoader.cc:24: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [62/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cParasite.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cResourceLib.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cResourceLib.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [63/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cOrgSensor.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cReactionLib.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cReactionLib.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [64/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cOrgMessage.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cResource.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cResource.cc:21: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [65/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cOrganism.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/systematics/Group.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/private/avida/private/systematics/Clade.h:27, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/systematics/Clade.cc:24: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [66/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cMutationRates.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cAvidaContext.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cSpatialResCount.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cSpatialResCount.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [67/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cMigrationMatrix.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cResourceHistory.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cResourceHistory.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [68/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cLandscape.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cReactionResult.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cReactionResult.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [69/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cGradientCount.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/output/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/output/Socket.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/output/File.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/output/File.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [70/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cGenomeUtil.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cReaction.h:27, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cReaction.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [71/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cEventList.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/World.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/output/Manager.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/output/Manager.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [72/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cEnvironment.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/systematics/Group.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/private/avida/private/systematics/GenomeTestMetrics.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/systematics/GenomeTestMetrics.cc:24: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [73/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cDemeCellEvent.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/String.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/StringUtils.h:37, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Properties.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/private/avida/private/systematics/CladeArbiter.h:27, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/systematics/CladeArbiter.cc:24: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [74/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cDemeNetwork.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/targets/avida/Avida2Driver.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/targets/avida/Avida2Driver.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [75/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cDeme.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/String.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/StringUtils.h:37, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Properties.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/private/avida/private/systematics/GenotypeArbiter.h:27, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/systematics/GenotypeArbiter.cc:24: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [76/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cContextPhenotype.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/viewer/Map.h:27, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/viewer/Map.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [77/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cBirthMatingTypeGlobalHandler.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Genome.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/viewer/OrganismTrace.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/viewer/OrganismTrace.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [78/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cBirthSelectionHandler.cc.o [79/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cBirthNeighborhoodHandler.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Genome.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/private/avida/private/systematics/Genotype.h:27, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/systematics/Genotype.cc:24: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [80/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cBirthMateSelectHandler.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareTracer.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cCPUTestInfo.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cPlasticPhenotype.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cPlasticPhenotype.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [81/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cBirthGridLocalHandler.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cAvidaContext.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cMigrationMatrix.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cMigrationMatrix.cc:9: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [82/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cBirthGlobalHandler.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/InstructionSequence.h:31, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cGenomeUtil.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cGenomeUtil.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [83/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cBirthGenomeSizeHandler.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cAvidaContext.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cMutationRates.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cMutationRates.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [84/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cBirthEntry.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Genome.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cParasite.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cParasite.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [85/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cBirthDemeHandler.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Genome.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cOrganism.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cOrgMessage.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [86/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cBirthChamber.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cContextPhenotype.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cContextPhenotype.cc:1: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [87/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/main/cAvidaConfig.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/Avida.h:39, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cResourceCount.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cResourceCount.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [88/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/environment/Manager.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cPhenPlastUtil.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cPhenPlastUtil.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [89/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/data/TimeSeriesRecorder.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/InstructionSequence.h:31, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cPopulationCell.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cPopulationCell.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [90/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/data/Recorder.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Genome.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthEntry.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthGlobalHandler.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthGlobalHandler.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [91/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/data/Provider.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Genome.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cPhenPlastGenotype.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cPhenPlastGenotype.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [92/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/data/Package.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Genome.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthEntry.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthGenomeSizeHandler.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthGenomeSizeHandler.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [93/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/data/Manager.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cDemeCellEvent.h:24, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cDemeCellEvent.cc:21: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [94/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/cpu/cTestCPUInterface.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/Avida.h:39, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cDemeNetwork.cc:21: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [95/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/cpu/cTestCPU.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/actions/cAction.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cEventList.h:27, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cEventList.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [96/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/cpu/cInstSet.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Genome.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cOrganism.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cOrgSensor.h:27, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cOrgSensor.cc:24: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [97/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/cpu/cHeadCPU.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cAvidaContext.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cSpatialResCount.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cGradientCount.h:27, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cGradientCount.cc:24: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [98/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/cpu/cHardwareTransSMT.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Genome.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthEntry.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthMateSelectHandler.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthMateSelectHandler.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [99/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/cpu/cHardwareStatusPrinter.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Genome.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cLandscape.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cLandscape.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [100/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/cpu/cHardwareManager.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/data/Recorder.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/data/Recorder.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [101/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/cpu/cHardwareGP8.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/String.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/data/Package.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/data/Package.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [102/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/cpu/cHardwareExperimental.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/data/Provider.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/data/Provider.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [103/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/cpu/cHardwareCPU.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/InstructionSequence.h:31, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cPhenotype.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cPhenotype.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [104/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/cpu/cHardwareBCR.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Genome.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthEntry.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthEntry.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [105/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/cpu/cHardwareBase.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/WorldDriver.h:30, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cPopulationInterface.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cPopulationInterface.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [106/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/cpu/cCPUTestInfo.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthDemeHandler.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthDemeHandler.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [107/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/cpu/cCPUStack.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/World.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/environment/Manager.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/environment/Manager.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [108/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/cpu/cCPUMemory.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthNeighborhoodHandler.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthNeighborhoodHandler.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [109/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/cpu/cCodeLabel.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Genome.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthEntry.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthMatingTypeGlobalHandler.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthMatingTypeGlobalHandler.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [110/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/core/World.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthGridLocalHandler.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthGridLocalHandler.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [111/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/core/Version.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/data/TimeSeriesRecorder.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/data/TimeSeriesRecorder.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [112/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/core/Types.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/Avida.h:39, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHeadCPU.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHeadCPU.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [113/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/core/Properties.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cAvidaContext.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cMutationRates.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cEnvironment.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cEnvironment.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [114/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/core/InstructionSequence.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/String.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Version.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/core/Version.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [115/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/core/GlobalObject.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cCPUStack.cc:26: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/string:48, from /usr/include/c++/12.2.1/bits/locale_classes.h:40, from /usr/include/c++/12.2.1/bits/ios_base.h:41, from /usr/include/c++/12.2.1/ios:42, from /usr/include/c++/12.2.1/ostream:38, from /usr/include/c++/12.2.1/iostream:39, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cCPUStack.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cCPUStack.cc:23: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [116/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/core/Genome.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/InstructionSequence.h:31, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cCPUMemory.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cCPUMemory.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [117/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/core/GeneticRepresentation.cc.o [118/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/core/Avida.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/systematics/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cOrgInterface.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cTestCPUInterface.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cTestCPUInterface.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [119/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/analyze/cMutationalNeighborhood.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cAvidaConfig.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cAvidaConfig.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [120/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/analyze/cModularityAnalysis.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/core/Types.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [121/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/analyze/cGenotypeData.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/Avida.h:39, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cCodeLabel.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cCodeLabel.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [122/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/analyze/cGenotypeBatch.cc.o [123/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/analyze/cAnalyzeJobWorker.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Genome.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cOrganism.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cOrganism.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [124/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/analyze/cAnalyzeJobQueue.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/systematics/Group.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthChamber.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cBirthChamber.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [125/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/analyze/cAnalyzeTreeStats_Gamma.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/World.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/core/World.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [126/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/analyze/cAnalyzeTreeStats_CumulativeStemminess.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/InstructionSequence.h:31, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cInstSet.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cInstSet.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/string:48, from /usr/include/c++/12.2.1/bits/locale_classes.h:40, from /usr/include/c++/12.2.1/bits/ios_base.h:41, from /usr/include/c++/12.2.1/ios:42, from /usr/include/c++/12.2.1/ostream:38, from /usr/include/c++/12.2.1/iostream:39, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cInstSet.h:26: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [127/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/analyze/cAnalyzeGenotype.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/output/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/output/Socket.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/output/File.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareStatusPrinter.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareStatusPrinter.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [128/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/analyze/cAnalyze.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/systematics/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cOrgInterface.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cTaskContext.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cTaskLib.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cTaskLib.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cTaskLib.cc:34: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cOrgMessagePredicate.h:58:42: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 58 | class cOrgMessagePredicate : public std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/12.2.1/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cTaskLib.cc:35: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cOrgMovementPredicate.h:46:43: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 46 | class cOrgMovementPredicate : public std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/12.2.1/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ [129/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/actions/SaveLoadActions.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/data/Manager.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/data/Manager.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [130/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/actions/PrintActions.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/String.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/StringUtils.h:37, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Properties.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/core/Properties.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [131/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/actions/PopulationActions.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareTracer.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cCPUTestInfo.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cCPUTestInfo.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [132/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/actions/LandscapeActions.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/core/GeneticRepresentation.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [133/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/actions/EnvironmentActions.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/systematics/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cDeme.h:27, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cDeme.cc:21: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/bits/stl_tree.h:65, from /usr/include/c++/12.2.1/set:60, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cDeme.h:24: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cDeme.cc:34: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cOrgMessagePredicate.h:58:42: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 58 | class cOrgMessagePredicate : public std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/12.2.1/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cDeme.cc:35: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cOrgMovementPredicate.h:46:43: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 46 | class cOrgMovementPredicate : public std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/12.2.1/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cDeme.cc:36: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cDemePredicate.h:45:36: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 45 | class cDemePredicate : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [134/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/actions/DriverActions.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cTestCPU.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cTestCPU.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/string:48, from /usr/include/c++/12.2.1/bits/locale_classes.h:40, from /usr/include/c++/12.2.1/bits/ios_base.h:41, from /usr/include/c++/12.2.1/ios:42, from /usr/include/c++/12.2.1/istream:38, from /usr/include/c++/12.2.1/fstream:38, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cTestCPU.h:26: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [135/204] Building CXX object avida-core/CMakeFiles/avida-core.dir/source/actions/cActionLibrary.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/InstructionSequence.h:31, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/core/InstructionSequence.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [136/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/stat/Functions.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cAnalyzeJobQueue.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cAnalyzeJobWorker.cc:24: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [137/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/stat/ContingencyTable.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cWorld.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cWorld.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [138/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/stat/Accumulator.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cAnalyzeJobQueue.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cAnalyzeJobQueue.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [139/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/platform/FloatingPoint.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/viewer/Freezer.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/viewer/Freezer.cc:24: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [140/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/malloc/TCFreeList.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cTestCPU.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareManager.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareManager.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/string:48, from /usr/include/c++/12.2.1/bits/locale_classes.h:40, from /usr/include/c++/12.2.1/bits/ios_base.h:41, from /usr/include/c++/12.2.1/ios:42, from /usr/include/c++/12.2.1/istream:38, from /usr/include/c++/12.2.1/fstream:38, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cTestCPU.h:26: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [141/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/malloc/FixedSegment.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/actions/cAction.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/actions/cActionLibrary.h:27, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/actions/cActionLibrary.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [142/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/ThreadSpecific.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Genome.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/core/Genome.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [143/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/Thread.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/Avida.h:39, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/core/Avida.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [144/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/StringUtils.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/InstructionSequence.h:31, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareBase.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareBase.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [145/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/StringBuffer.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/Avida.h:39, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareTransSMT.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareTransSMT.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [146/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/String.cc.o [147/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/SmartPtr.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cAnalyzeTreeStats_CumulativeStemminess.h:24, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cAnalyzeTreeStats_CumulativeStemminess.cc:21: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [148/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/Set.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cAnalyzeTreeStats_Gamma.h:24, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cAnalyzeTreeStats_Gamma.cc:21: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [149/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/RWLock.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cGenotypeBatch.h:27, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cGenotypeBatch.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [150/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/Pair.cc.o [151/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/Mutex.cc.o [152/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/Matrix.cc.o [153/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/Map.cc.o [154/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/Malloc.cc.o [155/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/List.cc.o [156/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/Functor.cc.o [157/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/FileSystem.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareTracer.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cCPUTestInfo.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cModularityAnalysis.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cModularityAnalysis.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [158/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/ConditionVariable.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cMutationalNeighborhood.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cMutationalNeighborhood.cc:22: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [159/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/ArrayUtils.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/actions/cAction.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/actions/SaveLoadActions.cc:24: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [160/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/Array.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/WorldDriver.h:30, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/actions/DriverActions.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [161/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/core/Algorithms.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/Avida.h:39, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cStats.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cStats.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cStats.cc:44: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cOrgMessagePredicate.h:58:42: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 58 | class cOrgMessagePredicate : public std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/12.2.1/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cStats.cc:45: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cOrgMovementPredicate.h:46:43: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 46 | class cOrgMovementPredicate : public std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/12.2.1/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ [162/204] Building CXX object libs/apto/unittests/CMakeFiles/apto-test.dir/main.cc.o [163/204] Building CXX object libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/gtest.cc.o [164/204] Building CXX object libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/gtest-typed-test.cc.o [165/204] Building CXX object libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/gtest-test-part.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/String.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/FileSystem.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/targets/avida/primitive.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [166/204] Building CXX object libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/gtest-printers.cc.o [167/204] Building CXX object libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/gtest-port.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/Avida.h:39, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareGP8.h:27, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareGP8.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [168/204] Building CXX object libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/gtest-filepath.cc.o [169/204] Building CXX object libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/gtest-death-test.cc.o [170/204] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/stat/FishersExact.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/String.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/core/StringUtils.cc:31: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [171/204] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/stat/ContingencyTable.cc.o [172/204] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/scheduler/RoundRobin.cc.o [173/204] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/scheduler/ProbabilisticIntegrated.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/Avida.h:39, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/actions/LandscapeActions.cc:24: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [174/204] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/scheduler/Probabilistic.cc.o [175/204] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/scheduler/Integrated.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/String.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/FileSystem.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/core/FileSystem.cc:31: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [176/204] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/rng/AvidaRNG.cc.o [177/204] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/platform/Platform.cc.o [178/204] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/platform/FileSystem.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/core/ArrayUtils.cc:32: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [179/204] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/core/Thread.cc.o [180/204] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/core/String.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/core/SmartPtr.cc:40: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [181/204] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/core/Random.cc.o [182/204] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/core/PriorityScheduler.cc.o [183/204] Building CXX object libs/apto/src/CMakeFiles/aptostatic.dir/core/FileSystem.cc.o [184/204] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/stat/FishersExact.cc.o [185/204] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/stat/ContingencyTable.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/Avida.h:39, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareBCR.h:27, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareBCR.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [186/204] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/scheduler/RoundRobin.cc.o [187/204] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/scheduler/ProbabilisticIntegrated.cc.o [188/204] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/scheduler/Probabilistic.cc.o [189/204] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/scheduler/Integrated.cc.o [190/204] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/rng/AvidaRNG.cc.o [191/204] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/platform/Platform.cc.o [192/204] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/platform/FileSystem.cc.o [193/204] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/core/Thread.cc.o [194/204] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/core/String.cc.o [195/204] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/core/Random.cc.o [196/204] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/core/PriorityScheduler.cc.o [197/204] Building CXX object libs/apto/src/CMakeFiles/aptoshared.dir/core/FileSystem.cc.o In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/String.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/core/String.cc:31: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/scheduler/Probabilistic.h:37, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/scheduler/Probabilistic.cc:31: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/tools/cString.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/actions/cAction.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/actions/EnvironmentActions.cc:26: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/scheduler/ProbabilisticIntegrated.h:37, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/scheduler/ProbabilisticIntegrated.cc:31: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/core/Set.cc:32: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/String.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/core/StringBuffer.cc:31: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/scheduler/ProbabilisticIntegrated.h:37, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/scheduler/ProbabilisticIntegrated.cc:31: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/String.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/core/String.cc:31: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/scheduler/Probabilistic.h:37, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/scheduler/Probabilistic.cc:31: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/String.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/FileSystem.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/core/FileSystem.cc:31: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Genome.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cAnalyzeGenotype.h:27, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cAnalyzeGenotype.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/String.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/core/String.cc:31: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/String.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/FileSystem.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/core/FileSystem.cc:31: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/core/Functor.cc:31: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/core/Map.cc:32: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/unittests/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/viewer/Driver.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/viewer/Driver.cc:24: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [198/204] Linking CXX static library lib/libviewer.a In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/stat/FishersExact.cc:46: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [199/204] Linking CXX static library lib/libapto.a In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/data/Provider.h:29, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cPopulation.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cPopulation.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/Avida.h:39, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareExperimental.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareExperimental.cc:24: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/stat/FishersExact.cc:46: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/src/../include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [200/204] Linking CXX shared library lib/libapto.so [201/204] Linking CXX static library lib/libgtest.a [202/204] Linking CXX executable bin/apto-test In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/InstructionSequence.h:31, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/actions/PopulationActions.cc:27: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/actions/PopulationActions.cc:44: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/main/cOrgMessagePredicate.h:58:42: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 58 | class cOrgMessagePredicate : public std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/12.2.1/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/Avida.h:39, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareCPU.h:26, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/cpu/cHardwareCPU.cc:24: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cAnalyzeJobQueue.h:25, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cAnalyze.h:31, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cAnalyze.cc:23: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/string:48, from /usr/include/c++/12.2.1/bits/locale_classes.h:40, from /usr/include/c++/12.2.1/bits/ios_base.h:41, from /usr/include/c++/12.2.1/ios:42, from /usr/include/c++/12.2.1/ostream:38, from /usr/include/c++/12.2.1/iostream:39, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/analyze/cAnalyze.h:28: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/Functor.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/ArrayUtils.h:34, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core.h:36, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/Types.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/GeneticRepresentation.h:28, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/include/public/avida/core/InstructionSequence.h:31, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/avida-core/source/actions/PrintActions.cc:25: /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:545:14: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 545 | : public binary_function, Apto::SmartPtr, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12.2.1/functional:49, from /home/buildozer/aports/testing/avida/src/avida-ca1f311bc1bcaf021390c63bce6aa9455bbd44cc/libs/apto/include/apto/core/SmartPtr.h:44: /usr/include/c++/12.2.1/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [203/204] Linking CXX static library lib/libavida-core.a [204/204] Linking CXX executable bin/avida Avida Tools Unit Tests Testing: cRawBitArray -------------------------------------------------------------------------------- Default Constructor - ResizeClear: passed SetBit (round 1): passed SetBit (round 2): passed Constructor (size < 32): passed Copy: passed CountBits vs. CountBits2: passed CountBits - Post Copy: passed Copy Constructor: passed NOT Operation: passed AND Operation: passed OR Operation: passed NAND Operation: passed NOR Operation: passed XOR Operation: passed EQU Operation: passed Shift 0: passed Shift Left: passed Shift Right (sign bit): passed Shift Right (no sign bit): passed Shift Left Overflow: passed Shift Right Overflow: passed Shift Left (across bit fields): passed Shift Right (across bit fields): passed Shift Left (multiple bit fields): passed Shift Right (multiple bit fields): passed Increment: passed Increment Overflow: passed Increment (multiple bit fields): passed -------------------------------------------------------------------------------- All cRawBitArray tests passed. Testing: cBitArray -------------------------------------------------------------------------------- operator&: passed operator|: passed operator^: passed operator~: passed operator<<: passed operator>>: passed Chained Bitwise Operations: passed ++operator: passed operator++: passed -------------------------------------------------------------------------------- All cBitArray tests passed. All unit tests passed. >>> avida: Entering fakeroot... >>> avida*: Running postcheck for avida >>> avida*: Preparing package avida... >>> avida*: Stripping binaries >>> avida*: Scanning shared objects >>> avida*: Tracing dependencies... so:libc.musl-x86_64.so.1 so:libgcc_s.so.1 so:libstdc++.so.6 >>> avida*: Package size: 5.7 MB >>> avida*: Compressing data... >>> avida*: Create checksum... >>> avida*: Create avida-0_git20190813-r1.apk >>> avida: Build complete at Tue, 25 Oct 2022 02:37:24 +0000 elapsed time 0h 0m 48s >>> avida: Cleaning up srcdir >>> avida: Cleaning up pkgdir >>> avida: Uninstalling dependencies... (1/9) Purging .makedepends-avida (20221025.023638) (2/9) Purging cmake (3.24.2-r0) (3/9) Purging linux-headers (5.19.5-r0) (4/9) Purging samurai (1.2-r2) (5/9) Purging libarchive (3.6.1-r1) (6/9) Purging libbz2 (1.0.8-r3) (7/9) Purging xz-libs (5.2.7-r0) (8/9) Purging rhash-libs (1.4.3-r1) (9/9) Purging libuv (1.44.2-r0) Executing busybox-1.35.0-r27.trigger OK: 393 MiB in 98 packages >>> avida: Updating the testing/x86_64 repository index... >>> avida: Signing the index...