>>> py3-biopython: Building testing/py3-biopython 1.80-r0 (using abuild 3.10.0-r0) started Thu, 01 Dec 2022 05:09:14 +0000 >>> py3-biopython: Checking sanity of /home/buildozer/aports/testing/py3-biopython/APKBUILD... >>> py3-biopython: Analyzing dependencies... >>> py3-biopython: Installing for build: build-base py3-numpy python3 py3-setuptools py3-numpy-dev python3-dev (1/18) Installing libquadmath (12.2.1_git20220924-r4) (2/18) Installing libgfortran (12.2.1_git20220924-r4) (3/18) Installing openblas (0.3.21-r0) (4/18) Installing py3-numpy (1.23.5-r0) (5/18) Installing libbz2 (1.0.8-r4) (6/18) Installing libffi (3.4.4-r0) (7/18) Installing gdbm (1.23-r0) (8/18) Installing xz-libs (5.2.8-r0) (9/18) Installing mpdecimal (2.5.1-r1) (10/18) Installing readline (8.2.0-r0) (11/18) Installing sqlite-libs (3.40.0-r0) (12/18) Installing python3 (3.11.0-r2) (13/18) Installing py3-parsing (3.0.9-r1) (14/18) Installing py3-packaging (21.3-r3) (15/18) Installing py3-setuptools (65.6.3-r0) (16/18) Installing py3-numpy-dev (1.23.5-r0) (17/18) Installing python3-dev (3.11.0-r2) (18/18) Installing .makedepends-py3-biopython (20221201.050916) Executing busybox-1.35.0-r29.trigger OK: 608 MiB in 116 packages >>> py3-biopython: Cleaning up srcdir >>> py3-biopython: Cleaning up pkgdir >>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/edge/biopython-1.80.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 146 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 curl: (22) The requested URL returned error: 404 >>> py3-biopython: Fetching https://files.pythonhosted.org/packages/source/b/biopython/biopython-1.80.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 17.0M 100 17.0M 0 0 20.7M 0 --:--:-- --:--:-- --:--:-- 20.7M >>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/edge/biopython-1.80.tar.gz >>> py3-biopython: Checking sha512sums... biopython-1.80.tar.gz: OK >>> py3-biopython: Unpacking /var/cache/distfiles/edge/biopython-1.80.tar.gz... running build running build_py creating build creating build/lib.linux-x86_64-cpython-311 creating build/lib.linux-x86_64-cpython-311/Bio copying Bio/MarkovModel.py -> build/lib.linux-x86_64-cpython-311/Bio copying Bio/bgzf.py -> build/lib.linux-x86_64-cpython-311/Bio copying Bio/pairwise2.py -> build/lib.linux-x86_64-cpython-311/Bio copying Bio/MaxEntropy.py -> build/lib.linux-x86_64-cpython-311/Bio copying Bio/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio copying Bio/Seq.py -> build/lib.linux-x86_64-cpython-311/Bio copying Bio/SeqRecord.py -> build/lib.linux-x86_64-cpython-311/Bio copying Bio/File.py -> build/lib.linux-x86_64-cpython-311/Bio copying Bio/_utils.py -> build/lib.linux-x86_64-cpython-311/Bio copying Bio/kNN.py -> build/lib.linux-x86_64-cpython-311/Bio copying Bio/NaiveBayes.py -> build/lib.linux-x86_64-cpython-311/Bio copying Bio/LogisticRegression.py -> build/lib.linux-x86_64-cpython-311/Bio copying Bio/SeqFeature.py -> build/lib.linux-x86_64-cpython-311/Bio creating build/lib.linux-x86_64-cpython-311/Bio/Affy copying Bio/Affy/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Affy copying Bio/Affy/CelFile.py -> build/lib.linux-x86_64-cpython-311/Bio/Affy creating build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/bigpsl.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/sam.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/nexus.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/bed.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/psl.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/hhr.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/exonerate.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/emboss.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/tabular.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/msf.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/fasta.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/interfaces.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/stockholm.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/bigbed.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/maf.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/AlignInfo.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/bigmaf.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/a2m.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/clustal.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/mauve.py -> build/lib.linux-x86_64-cpython-311/Bio/Align copying Bio/Align/phylip.py -> build/lib.linux-x86_64-cpython-311/Bio/Align creating build/lib.linux-x86_64-cpython-311/Bio/Align/Applications copying Bio/Align/Applications/_Prank.py -> build/lib.linux-x86_64-cpython-311/Bio/Align/Applications copying Bio/Align/Applications/_Dialign.py -> build/lib.linux-x86_64-cpython-311/Bio/Align/Applications copying Bio/Align/Applications/_ClustalOmega.py -> build/lib.linux-x86_64-cpython-311/Bio/Align/Applications copying Bio/Align/Applications/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Align/Applications copying Bio/Align/Applications/_Muscle.py -> build/lib.linux-x86_64-cpython-311/Bio/Align/Applications copying Bio/Align/Applications/_Probcons.py -> build/lib.linux-x86_64-cpython-311/Bio/Align/Applications copying Bio/Align/Applications/_Clustalw.py -> build/lib.linux-x86_64-cpython-311/Bio/Align/Applications copying Bio/Align/Applications/_TCoffee.py -> build/lib.linux-x86_64-cpython-311/Bio/Align/Applications copying Bio/Align/Applications/_Mafft.py -> build/lib.linux-x86_64-cpython-311/Bio/Align/Applications copying Bio/Align/Applications/_MSAProbs.py -> build/lib.linux-x86_64-cpython-311/Bio/Align/Applications creating build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices copying Bio/Align/substitution_matrices/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices creating build/lib.linux-x86_64-cpython-311/Bio/AlignIO copying Bio/AlignIO/NexusIO.py -> build/lib.linux-x86_64-cpython-311/Bio/AlignIO copying Bio/AlignIO/PhylipIO.py -> build/lib.linux-x86_64-cpython-311/Bio/AlignIO copying Bio/AlignIO/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/AlignIO copying Bio/AlignIO/FastaIO.py -> build/lib.linux-x86_64-cpython-311/Bio/AlignIO copying Bio/AlignIO/EmbossIO.py -> build/lib.linux-x86_64-cpython-311/Bio/AlignIO copying Bio/AlignIO/MauveIO.py -> build/lib.linux-x86_64-cpython-311/Bio/AlignIO copying Bio/AlignIO/Interfaces.py -> build/lib.linux-x86_64-cpython-311/Bio/AlignIO copying Bio/AlignIO/MafIO.py -> build/lib.linux-x86_64-cpython-311/Bio/AlignIO copying Bio/AlignIO/StockholmIO.py -> build/lib.linux-x86_64-cpython-311/Bio/AlignIO copying Bio/AlignIO/MsfIO.py -> build/lib.linux-x86_64-cpython-311/Bio/AlignIO copying Bio/AlignIO/ClustalIO.py -> build/lib.linux-x86_64-cpython-311/Bio/AlignIO creating build/lib.linux-x86_64-cpython-311/Bio/Alphabet copying Bio/Alphabet/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Alphabet creating build/lib.linux-x86_64-cpython-311/Bio/Application copying Bio/Application/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Application creating build/lib.linux-x86_64-cpython-311/Bio/Blast copying Bio/Blast/NCBIXML.py -> build/lib.linux-x86_64-cpython-311/Bio/Blast copying Bio/Blast/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Blast copying Bio/Blast/ParseBlastTable.py -> build/lib.linux-x86_64-cpython-311/Bio/Blast copying Bio/Blast/Record.py -> build/lib.linux-x86_64-cpython-311/Bio/Blast copying Bio/Blast/NCBIWWW.py -> build/lib.linux-x86_64-cpython-311/Bio/Blast copying Bio/Blast/Applications.py -> build/lib.linux-x86_64-cpython-311/Bio/Blast creating build/lib.linux-x86_64-cpython-311/Bio/CAPS copying Bio/CAPS/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/CAPS creating build/lib.linux-x86_64-cpython-311/Bio/Cluster copying Bio/Cluster/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Cluster creating build/lib.linux-x86_64-cpython-311/Bio/codonalign copying Bio/codonalign/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/codonalign copying Bio/codonalign/codonseq.py -> build/lib.linux-x86_64-cpython-311/Bio/codonalign copying Bio/codonalign/codonalignment.py -> build/lib.linux-x86_64-cpython-311/Bio/codonalign creating build/lib.linux-x86_64-cpython-311/Bio/Compass copying Bio/Compass/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Compass creating build/lib.linux-x86_64-cpython-311/Bio/Data copying Bio/Data/PDBData.py -> build/lib.linux-x86_64-cpython-311/Bio/Data copying Bio/Data/SCOPData.py -> build/lib.linux-x86_64-cpython-311/Bio/Data copying Bio/Data/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Data copying Bio/Data/CodonTable.py -> build/lib.linux-x86_64-cpython-311/Bio/Data copying Bio/Data/IUPACData.py -> build/lib.linux-x86_64-cpython-311/Bio/Data creating build/lib.linux-x86_64-cpython-311/Bio/Emboss copying Bio/Emboss/Primer3.py -> build/lib.linux-x86_64-cpython-311/Bio/Emboss copying Bio/Emboss/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Emboss copying Bio/Emboss/PrimerSearch.py -> build/lib.linux-x86_64-cpython-311/Bio/Emboss copying Bio/Emboss/Applications.py -> build/lib.linux-x86_64-cpython-311/Bio/Emboss creating build/lib.linux-x86_64-cpython-311/Bio/Entrez copying Bio/Entrez/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Entrez copying Bio/Entrez/Parser.py -> build/lib.linux-x86_64-cpython-311/Bio/Entrez creating build/lib.linux-x86_64-cpython-311/Bio/ExPASy copying Bio/ExPASy/Prosite.py -> build/lib.linux-x86_64-cpython-311/Bio/ExPASy copying Bio/ExPASy/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/ExPASy copying Bio/ExPASy/cellosaurus.py -> build/lib.linux-x86_64-cpython-311/Bio/ExPASy copying Bio/ExPASy/ScanProsite.py -> build/lib.linux-x86_64-cpython-311/Bio/ExPASy copying Bio/ExPASy/Prodoc.py -> build/lib.linux-x86_64-cpython-311/Bio/ExPASy copying Bio/ExPASy/Enzyme.py -> build/lib.linux-x86_64-cpython-311/Bio/ExPASy creating build/lib.linux-x86_64-cpython-311/Bio/GenBank copying Bio/GenBank/utils.py -> build/lib.linux-x86_64-cpython-311/Bio/GenBank copying Bio/GenBank/Scanner.py -> build/lib.linux-x86_64-cpython-311/Bio/GenBank copying Bio/GenBank/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/GenBank copying Bio/GenBank/Record.py -> build/lib.linux-x86_64-cpython-311/Bio/GenBank creating build/lib.linux-x86_64-cpython-311/Bio/Geo copying Bio/Geo/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Geo copying Bio/Geo/Record.py -> build/lib.linux-x86_64-cpython-311/Bio/Geo creating build/lib.linux-x86_64-cpython-311/Bio/Graphics copying Bio/Graphics/BasicChromosome.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics copying Bio/Graphics/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics copying Bio/Graphics/DisplayRepresentation.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics copying Bio/Graphics/ColorSpiral.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics copying Bio/Graphics/Comparative.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics copying Bio/Graphics/Distribution.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics copying Bio/Graphics/KGML_vis.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics creating build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Colors.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Feature.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Diagram.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Graph.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Track.py -> build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram creating build/lib.linux-x86_64-cpython-311/Bio/HMM copying Bio/HMM/MarkovModel.py -> build/lib.linux-x86_64-cpython-311/Bio/HMM copying Bio/HMM/Utilities.py -> build/lib.linux-x86_64-cpython-311/Bio/HMM copying Bio/HMM/Trainer.py -> build/lib.linux-x86_64-cpython-311/Bio/HMM copying Bio/HMM/DynamicProgramming.py -> build/lib.linux-x86_64-cpython-311/Bio/HMM copying Bio/HMM/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/HMM creating build/lib.linux-x86_64-cpython-311/Bio/KEGG copying Bio/KEGG/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/KEGG copying Bio/KEGG/REST.py -> build/lib.linux-x86_64-cpython-311/Bio/KEGG creating build/lib.linux-x86_64-cpython-311/Bio/KEGG/Compound copying Bio/KEGG/Compound/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/KEGG/Compound creating build/lib.linux-x86_64-cpython-311/Bio/KEGG/Enzyme copying Bio/KEGG/Enzyme/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/KEGG/Enzyme creating build/lib.linux-x86_64-cpython-311/Bio/KEGG/Gene copying Bio/KEGG/Gene/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/KEGG/Gene creating build/lib.linux-x86_64-cpython-311/Bio/KEGG/Map copying Bio/KEGG/Map/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/KEGG/Map creating build/lib.linux-x86_64-cpython-311/Bio/PDB creating build/lib.linux-x86_64-cpython-311/Bio/PDB/mmtf copying Bio/PDB/mmtf/DefaultParser.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB/mmtf copying Bio/PDB/mmtf/mmtfio.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB/mmtf copying Bio/PDB/mmtf/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB/mmtf creating build/lib.linux-x86_64-cpython-311/Bio/KEGG/KGML copying Bio/KEGG/KGML/KGML_pathway.py -> build/lib.linux-x86_64-cpython-311/Bio/KEGG/KGML copying Bio/KEGG/KGML/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/KEGG/KGML copying Bio/KEGG/KGML/KGML_parser.py -> build/lib.linux-x86_64-cpython-311/Bio/KEGG/KGML creating build/lib.linux-x86_64-cpython-311/Bio/Medline copying Bio/Medline/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Medline creating build/lib.linux-x86_64-cpython-311/Bio/motifs copying Bio/motifs/transfac.py -> build/lib.linux-x86_64-cpython-311/Bio/motifs copying Bio/motifs/xms.py -> build/lib.linux-x86_64-cpython-311/Bio/motifs copying Bio/motifs/minimal.py -> build/lib.linux-x86_64-cpython-311/Bio/motifs copying Bio/motifs/mast.py -> build/lib.linux-x86_64-cpython-311/Bio/motifs copying Bio/motifs/meme.py -> build/lib.linux-x86_64-cpython-311/Bio/motifs copying Bio/motifs/pfm.py -> build/lib.linux-x86_64-cpython-311/Bio/motifs copying Bio/motifs/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/motifs copying Bio/motifs/alignace.py -> build/lib.linux-x86_64-cpython-311/Bio/motifs copying Bio/motifs/thresholds.py -> build/lib.linux-x86_64-cpython-311/Bio/motifs copying Bio/motifs/matrix.py -> build/lib.linux-x86_64-cpython-311/Bio/motifs copying Bio/motifs/clusterbuster.py -> build/lib.linux-x86_64-cpython-311/Bio/motifs creating build/lib.linux-x86_64-cpython-311/Bio/motifs/applications copying Bio/motifs/applications/_xxmotif.py -> build/lib.linux-x86_64-cpython-311/Bio/motifs/applications copying Bio/motifs/applications/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/motifs/applications creating build/lib.linux-x86_64-cpython-311/Bio/motifs/jaspar copying Bio/motifs/jaspar/db.py -> build/lib.linux-x86_64-cpython-311/Bio/motifs/jaspar copying Bio/motifs/jaspar/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/motifs/jaspar creating build/lib.linux-x86_64-cpython-311/Bio/Nexus copying Bio/Nexus/Trees.py -> build/lib.linux-x86_64-cpython-311/Bio/Nexus copying Bio/Nexus/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Nexus copying Bio/Nexus/StandardData.py -> build/lib.linux-x86_64-cpython-311/Bio/Nexus copying Bio/Nexus/Nexus.py -> build/lib.linux-x86_64-cpython-311/Bio/Nexus copying Bio/Nexus/Nodes.py -> build/lib.linux-x86_64-cpython-311/Bio/Nexus creating build/lib.linux-x86_64-cpython-311/Bio/NMR copying Bio/NMR/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/NMR copying Bio/NMR/xpktools.py -> build/lib.linux-x86_64-cpython-311/Bio/NMR copying Bio/NMR/NOEtools.py -> build/lib.linux-x86_64-cpython-311/Bio/NMR creating build/lib.linux-x86_64-cpython-311/Bio/Pathway copying Bio/Pathway/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Pathway creating build/lib.linux-x86_64-cpython-311/Bio/Pathway/Rep copying Bio/Pathway/Rep/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Pathway/Rep copying Bio/Pathway/Rep/MultiGraph.py -> build/lib.linux-x86_64-cpython-311/Bio/Pathway/Rep copying Bio/Pathway/Rep/Graph.py -> build/lib.linux-x86_64-cpython-311/Bio/Pathway/Rep copying Bio/PDB/cealign.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/Atom.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/PDBList.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/SCADIO.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/PDBParser.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/MMCIF2Dict.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/ic_rebuild.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/parse_pdb_header.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/Entity.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/vectors.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/mmcifio.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/SASA.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/Selection.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/Polypeptide.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/Residue.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/MMCIFParser.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/Structure.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/PICIO.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/NACCESS.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/internal_coords.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/StructureBuilder.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/AbstractPropertyMap.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/ic_data.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/Chain.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/DSSP.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/PDBExceptions.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/Model.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/NeighborSearch.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/FragmentMapper.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/qcprot.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/PSEA.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/HSExposure.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/Superimposer.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/ResidueDepth.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/StructureAlignment.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/Dice.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/PDBIO.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB creating build/lib.linux-x86_64-cpython-311/Bio/phenotype copying Bio/phenotype/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/phenotype copying Bio/phenotype/pm_fitting.py -> build/lib.linux-x86_64-cpython-311/Bio/phenotype copying Bio/phenotype/phen_micro.py -> build/lib.linux-x86_64-cpython-311/Bio/phenotype creating build/lib.linux-x86_64-cpython-311/Bio/PopGen copying Bio/PopGen/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/PopGen creating build/lib.linux-x86_64-cpython-311/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Controller.py -> build/lib.linux-x86_64-cpython-311/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/LargeFileParser.py -> build/lib.linux-x86_64-cpython-311/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/EasyController.py -> build/lib.linux-x86_64-cpython-311/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/FileParser.py -> build/lib.linux-x86_64-cpython-311/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/PopGen/GenePop creating build/lib.linux-x86_64-cpython-311/Bio/Restriction copying Bio/Restriction/Restriction.py -> build/lib.linux-x86_64-cpython-311/Bio/Restriction copying Bio/Restriction/PrintFormat.py -> build/lib.linux-x86_64-cpython-311/Bio/Restriction copying Bio/Restriction/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Restriction copying Bio/Restriction/Restriction_Dictionary.py -> build/lib.linux-x86_64-cpython-311/Bio/Restriction creating build/lib.linux-x86_64-cpython-311/Bio/SCOP copying Bio/SCOP/Residues.py -> build/lib.linux-x86_64-cpython-311/Bio/SCOP copying Bio/SCOP/Raf.py -> build/lib.linux-x86_64-cpython-311/Bio/SCOP copying Bio/SCOP/Des.py -> build/lib.linux-x86_64-cpython-311/Bio/SCOP copying Bio/SCOP/Cla.py -> build/lib.linux-x86_64-cpython-311/Bio/SCOP copying Bio/SCOP/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/SCOP copying Bio/SCOP/Hie.py -> build/lib.linux-x86_64-cpython-311/Bio/SCOP copying Bio/SCOP/Dom.py -> build/lib.linux-x86_64-cpython-311/Bio/SCOP creating build/lib.linux-x86_64-cpython-311/Bio/SearchIO copying Bio/SearchIO/_index.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO copying Bio/SearchIO/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO copying Bio/SearchIO/_utils.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO copying Bio/SearchIO/FastaIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO copying Bio/SearchIO/BlatIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO creating build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_legacy copying Bio/SearchIO/_legacy/NCBIStandalone.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_legacy copying Bio/SearchIO/_legacy/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_legacy copying Bio/SearchIO/_legacy/ParserSupport.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_legacy creating build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_model copying Bio/SearchIO/_model/_base.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_model copying Bio/SearchIO/_model/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_model copying Bio/SearchIO/_model/query.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_model copying Bio/SearchIO/_model/hit.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_model copying Bio/SearchIO/_model/hsp.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_model creating build/lib.linux-x86_64-cpython-311/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_xml.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_tab.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_text.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/BlastIO creating build/lib.linux-x86_64-cpython-311/Bio/SearchIO/HHsuiteIO copying Bio/SearchIO/HHsuiteIO/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/HHsuiteIO copying Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/HHsuiteIO creating build/lib.linux-x86_64-cpython-311/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/_base.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/HmmerIO creating build/lib.linux-x86_64-cpython-311/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/_base.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/ExonerateIO creating build/lib.linux-x86_64-cpython-311/Bio/SearchIO/InterproscanIO copying Bio/SearchIO/InterproscanIO/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/InterproscanIO copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/lib.linux-x86_64-cpython-311/Bio/SearchIO/InterproscanIO creating build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/GckIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/SffIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/TabIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/_index.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/SwissIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/IgIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/SnapGeneIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/PdbIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/AbiIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/XdnaIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/SeqXmlIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/QualityIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/NibIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/FastaIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/PhdIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/Interfaces.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/AceIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/PirIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/UniprotIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/InsdcIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/SeqIO/TwoBitIO.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO creating build/lib.linux-x86_64-cpython-311/Bio/SeqUtils copying Bio/SeqUtils/ProtParam.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqUtils copying Bio/SeqUtils/CodonUsageIndices.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqUtils copying Bio/SeqUtils/MeltingTemp.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqUtils copying Bio/SeqUtils/CodonUsage.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqUtils copying Bio/SeqUtils/CheckSum.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqUtils copying Bio/SeqUtils/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqUtils copying Bio/SeqUtils/lcc.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqUtils copying Bio/SeqUtils/ProtParamData.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqUtils copying Bio/SeqUtils/IsoelectricPoint.py -> build/lib.linux-x86_64-cpython-311/Bio/SeqUtils creating build/lib.linux-x86_64-cpython-311/Bio/Sequencing copying Bio/Sequencing/Phd.py -> build/lib.linux-x86_64-cpython-311/Bio/Sequencing copying Bio/Sequencing/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Sequencing copying Bio/Sequencing/Ace.py -> build/lib.linux-x86_64-cpython-311/Bio/Sequencing creating build/lib.linux-x86_64-cpython-311/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_samtools.py -> build/lib.linux-x86_64-cpython-311/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_bwa.py -> build/lib.linux-x86_64-cpython-311/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_Novoalign.py -> build/lib.linux-x86_64-cpython-311/Bio/Sequencing/Applications creating build/lib.linux-x86_64-cpython-311/Bio/SVDSuperimposer copying Bio/SVDSuperimposer/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/SVDSuperimposer creating build/lib.linux-x86_64-cpython-311/Bio/PDB/QCPSuperimposer copying Bio/PDB/QCPSuperimposer/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/PDB/QCPSuperimposer creating build/lib.linux-x86_64-cpython-311/Bio/SwissProt copying Bio/SwissProt/KeyWList.py -> build/lib.linux-x86_64-cpython-311/Bio/SwissProt copying Bio/SwissProt/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/SwissProt creating build/lib.linux-x86_64-cpython-311/Bio/TogoWS copying Bio/TogoWS/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/TogoWS creating build/lib.linux-x86_64-cpython-311/Bio/Phylo copying Bio/Phylo/_io.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo copying Bio/Phylo/NexusIO.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo copying Bio/Phylo/PhyloXML.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo copying Bio/Phylo/PhyloXMLIO.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo copying Bio/Phylo/Consensus.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo copying Bio/Phylo/TreeConstruction.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo copying Bio/Phylo/_cdao_owl.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo copying Bio/Phylo/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo copying Bio/Phylo/CDAO.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo copying Bio/Phylo/_utils.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo copying Bio/Phylo/NewickIO.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo copying Bio/Phylo/NeXMLIO.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo copying Bio/Phylo/NeXML.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo copying Bio/Phylo/Newick.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo copying Bio/Phylo/BaseTree.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo copying Bio/Phylo/CDAOIO.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo creating build/lib.linux-x86_64-cpython-311/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Raxml.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Phyml.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo/Applications copying Bio/Phylo/Applications/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Fasttree.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo/Applications creating build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML copying Bio/Phylo/PAML/_paml.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_baseml.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_codeml.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_yn00.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML copying Bio/Phylo/PAML/yn00.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML copying Bio/Phylo/PAML/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML copying Bio/Phylo/PAML/codeml.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML copying Bio/Phylo/PAML/chi2.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML copying Bio/Phylo/PAML/baseml.py -> build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML creating build/lib.linux-x86_64-cpython-311/Bio/UniGene copying Bio/UniGene/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/UniGene creating build/lib.linux-x86_64-cpython-311/Bio/UniProt copying Bio/UniProt/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/UniProt copying Bio/UniProt/GOA.py -> build/lib.linux-x86_64-cpython-311/Bio/UniProt creating build/lib.linux-x86_64-cpython-311/Bio/Wise copying Bio/Wise/psw.py -> build/lib.linux-x86_64-cpython-311/Bio/Wise copying Bio/Wise/__init__.py -> build/lib.linux-x86_64-cpython-311/Bio/Wise copying Bio/Wise/dnal.py -> build/lib.linux-x86_64-cpython-311/Bio/Wise creating build/lib.linux-x86_64-cpython-311/BioSQL copying BioSQL/BioSeq.py -> build/lib.linux-x86_64-cpython-311/BioSQL copying BioSQL/Loader.py -> build/lib.linux-x86_64-cpython-311/BioSQL copying BioSQL/DBUtils.py -> build/lib.linux-x86_64-cpython-311/BioSQL copying BioSQL/BioSeqDatabase.py -> build/lib.linux-x86_64-cpython-311/BioSQL copying BioSQL/__init__.py -> build/lib.linux-x86_64-cpython-311/BioSQL running egg_info writing biopython.egg-info/PKG-INFO writing dependency_links to biopython.egg-info/dependency_links.txt writing requirements to biopython.egg-info/requires.txt writing top-level names to biopython.egg-info/top_level.txt reading manifest file 'biopython.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.py{}' found anywhere in distribution warning: no previously-included files matching '*.py-e' found anywhere in distribution warning: no previously-included files found matching 'Bio/Align/substitution_matrices/data/README.txt' adding license file 'LICENSE' adding license file 'LICENSE.rst' writing manifest file 'biopython.egg-info/SOURCES.txt' /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'Bio.Align.substitution_matrices.data' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'Bio.Align.substitution_matrices.data' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'Bio.Align.substitution_matrices.data' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'Bio.Align.substitution_matrices.data' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'Bio.Entrez.DTDs' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'Bio.Entrez.DTDs' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'Bio.Entrez.DTDs' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'Bio.Entrez.DTDs' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'Bio.Entrez.XSDs' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'Bio.Entrez.XSDs' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'Bio.Entrez.XSDs' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'Bio.Entrez.XSDs' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) copying Bio/cpairwise2module.c -> build/lib.linux-x86_64-cpython-311/Bio copying Bio/Align/_aligners.c -> build/lib.linux-x86_64-cpython-311/Bio/Align creating build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BENNER22 -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BENNER6 -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BENNER74 -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLASTN -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLASTP -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLOSUM45 -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLOSUM50 -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLOSUM62 -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLOSUM80 -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLOSUM90 -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/DAYHOFF -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/FENG -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/GENETIC -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/GONNET1992 -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/HOXD70 -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/JOHNSON -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/JONES -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/LEVIN -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/MCLACHLAN -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/MDM78 -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/MEGABLAST -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/NUC.4.4 -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/PAM250 -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/PAM30 -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/PAM70 -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/RAO -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/RISLER -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/SCHNEIDER -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/STR -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/TRANS -> build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data copying Bio/Cluster/cluster.c -> build/lib.linux-x86_64-cpython-311/Bio/Cluster copying Bio/Cluster/cluster.h -> build/lib.linux-x86_64-cpython-311/Bio/Cluster copying Bio/Cluster/clustermodule.c -> build/lib.linux-x86_64-cpython-311/Bio/Cluster creating build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/BITS-embedded-index2.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/BITS-question-answer2.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_0.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_1.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_2.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_3.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_4.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-chars1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-common1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-display1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-format1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-funding1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-link1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-list1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-math1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-modules1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-notat1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-para1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-phrase1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-references1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-related-object1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-section1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Features.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Access.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioTree.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Blast4.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cdd.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medlars.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mime.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Project.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Protein.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Pub.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PubMed.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_RNA.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Remap.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Rsite.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqres.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Sequence.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Submit.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Systems.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TxInit.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Variation.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_all.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NSE.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NSE.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/OMSSA.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/OMSSA.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PDB_General.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PIR_General.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PRF_General.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/SP_General.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/SP_General.mod.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivearticle.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-classes.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-models.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-modules.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/articlemeta.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/backmatter.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_110101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_130101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_140101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_150101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/chars.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/common.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/default-classes.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/default-mixes.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/display.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eInfo_020511.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_090910.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_101123.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/ePost_020511.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSearch_020511.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSpell.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSummary_041029.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/egquery.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/einfo.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/elink_020122.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/esearch.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/esummary-v1.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/format.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/htmltable.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsa.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsb.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsc.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsn.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamso.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsr.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isobox.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isocyr1.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isocyr2.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isodia.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk1.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk2.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk3.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk4.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isolat1.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isolat2.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomfrk.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomopf.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomscr.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isonum.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isopub.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isotech.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/journalmeta.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/link.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/list.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/math.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml-in-pubmed.mod -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml2.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml3-qname1.mod -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml3.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathmlsetup.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlalias.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlextra.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/modules.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/notat.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/para.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/phrase.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pmc-1.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_020114.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_080101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_090101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100301.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_110101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_120101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_130101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_130501.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_140101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_150101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_180101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_180601.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_190101.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/references.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/section.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/taxon.dtd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/xhtml-table-1.mod -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/xmlspecchars.ent -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs creating build/lib.linux-x86_64-cpython-311/Bio/Entrez/XSDs copying Bio/Entrez/XSDs/IPGReportSet.xsd -> build/lib.linux-x86_64-cpython-311/Bio/Entrez/XSDs copying Bio/motifs/_pwm.c -> build/lib.linux-x86_64-cpython-311/Bio/motifs copying Bio/Nexus/cnexus.c -> build/lib.linux-x86_64-cpython-311/Bio/Nexus copying Bio/PDB/ccealignmodule.c -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/PDB/kdtrees.c -> build/lib.linux-x86_64-cpython-311/Bio/PDB copying Bio/SeqIO/_twoBitIO.c -> build/lib.linux-x86_64-cpython-311/Bio/SeqIO copying Bio/PDB/QCPSuperimposer/qcprotmodule.c -> build/lib.linux-x86_64-cpython-311/Bio/PDB/QCPSuperimposer running build_ext building 'Bio.Align._aligners' extension creating build/temp.linux-x86_64-cpython-311 creating build/temp.linux-x86_64-cpython-311/Bio creating build/temp.linux-x86_64-cpython-311/Bio/Align gcc -DNDEBUG -g -fwrapv -O3 -Wall -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -DTHREAD_STACK_SIZE=0x200000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.11 -c Bio/Align/_aligners.c -o build/temp.linux-x86_64-cpython-311/Bio/Align/_aligners.o gcc -shared -Wl,--as-needed,-O1,--sort-common -Wl,--as-needed,-O1,--sort-common -Wl,--as-needed,-O1,--sort-common -Os -fomit-frame-pointer -Os -fomit-frame-pointer build/temp.linux-x86_64-cpython-311/Bio/Align/_aligners.o -L/usr/lib -o build/lib.linux-x86_64-cpython-311/Bio/Align/_aligners.cpython-311-x86_64-linux-musl.so building 'Bio.cpairwise2' extension gcc -DNDEBUG -g -fwrapv -O3 -Wall -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -DTHREAD_STACK_SIZE=0x200000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.11 -c Bio/cpairwise2module.c -o build/temp.linux-x86_64-cpython-311/Bio/cpairwise2module.o Bio/cpairwise2module.c: In function '_get_match_score': Bio/cpairwise2module.c:60:5: warning: 'PyEval_CallObjectWithKeywords' is deprecated [-Wdeprecated-declarations] 60 | if(!(py_result = PyEval_CallObject(py_match_fn, py_arglist))) | ^~ In file included from /usr/include/python3.11/Python.h:95, from Bio/cpairwise2module.c:16: /usr/include/python3.11/ceval.h:27:43: note: declared here 27 | Py_DEPRECATED(3.9) PyAPI_FUNC(PyObject *) PyEval_CallObjectWithKeywords( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -shared -Wl,--as-needed,-O1,--sort-common -Wl,--as-needed,-O1,--sort-common -Wl,--as-needed,-O1,--sort-common -Os -fomit-frame-pointer -Os -fomit-frame-pointer build/temp.linux-x86_64-cpython-311/Bio/cpairwise2module.o -L/usr/lib -o build/lib.linux-x86_64-cpython-311/Bio/cpairwise2.cpython-311-x86_64-linux-musl.so building 'Bio.Nexus.cnexus' extension creating build/temp.linux-x86_64-cpython-311/Bio/Nexus gcc -DNDEBUG -g -fwrapv -O3 -Wall -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -DTHREAD_STACK_SIZE=0x200000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.11 -c Bio/Nexus/cnexus.c -o build/temp.linux-x86_64-cpython-311/Bio/Nexus/cnexus.o gcc -shared -Wl,--as-needed,-O1,--sort-common -Wl,--as-needed,-O1,--sort-common -Wl,--as-needed,-O1,--sort-common -Os -fomit-frame-pointer -Os -fomit-frame-pointer build/temp.linux-x86_64-cpython-311/Bio/Nexus/cnexus.o -L/usr/lib -o build/lib.linux-x86_64-cpython-311/Bio/Nexus/cnexus.cpython-311-x86_64-linux-musl.so building 'Bio.PDB.QCPSuperimposer.qcprotmodule' extension creating build/temp.linux-x86_64-cpython-311/Bio/PDB creating build/temp.linux-x86_64-cpython-311/Bio/PDB/QCPSuperimposer gcc -DNDEBUG -g -fwrapv -O3 -Wall -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -DTHREAD_STACK_SIZE=0x200000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.11 -c Bio/PDB/QCPSuperimposer/qcprotmodule.c -o build/temp.linux-x86_64-cpython-311/Bio/PDB/QCPSuperimposer/qcprotmodule.o gcc -shared -Wl,--as-needed,-O1,--sort-common -Wl,--as-needed,-O1,--sort-common -Wl,--as-needed,-O1,--sort-common -Os -fomit-frame-pointer -Os -fomit-frame-pointer build/temp.linux-x86_64-cpython-311/Bio/PDB/QCPSuperimposer/qcprotmodule.o -L/usr/lib -o build/lib.linux-x86_64-cpython-311/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-311-x86_64-linux-musl.so building 'Bio.motifs._pwm' extension creating build/temp.linux-x86_64-cpython-311/Bio/motifs gcc -DNDEBUG -g -fwrapv -O3 -Wall -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -DTHREAD_STACK_SIZE=0x200000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.11 -c Bio/motifs/_pwm.c -o build/temp.linux-x86_64-cpython-311/Bio/motifs/_pwm.o gcc -shared -Wl,--as-needed,-O1,--sort-common -Wl,--as-needed,-O1,--sort-common -Wl,--as-needed,-O1,--sort-common -Os -fomit-frame-pointer -Os -fomit-frame-pointer build/temp.linux-x86_64-cpython-311/Bio/motifs/_pwm.o -L/usr/lib -o build/lib.linux-x86_64-cpython-311/Bio/motifs/_pwm.cpython-311-x86_64-linux-musl.so building 'Bio.Cluster._cluster' extension creating build/temp.linux-x86_64-cpython-311/Bio/Cluster gcc -DNDEBUG -g -fwrapv -O3 -Wall -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -DTHREAD_STACK_SIZE=0x200000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.11 -c Bio/Cluster/cluster.c -o build/temp.linux-x86_64-cpython-311/Bio/Cluster/cluster.o gcc -DNDEBUG -g -fwrapv -O3 -Wall -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -DTHREAD_STACK_SIZE=0x200000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.11 -c Bio/Cluster/clustermodule.c -o build/temp.linux-x86_64-cpython-311/Bio/Cluster/clustermodule.o gcc -shared -Wl,--as-needed,-O1,--sort-common -Wl,--as-needed,-O1,--sort-common -Wl,--as-needed,-O1,--sort-common -Os -fomit-frame-pointer -Os -fomit-frame-pointer build/temp.linux-x86_64-cpython-311/Bio/Cluster/cluster.o build/temp.linux-x86_64-cpython-311/Bio/Cluster/clustermodule.o -L/usr/lib -o build/lib.linux-x86_64-cpython-311/Bio/Cluster/_cluster.cpython-311-x86_64-linux-musl.so building 'Bio.PDB.kdtrees' extension gcc -DNDEBUG -g -fwrapv -O3 -Wall -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -DTHREAD_STACK_SIZE=0x200000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.11 -c Bio/PDB/kdtrees.c -o build/temp.linux-x86_64-cpython-311/Bio/PDB/kdtrees.o gcc -shared -Wl,--as-needed,-O1,--sort-common -Wl,--as-needed,-O1,--sort-common -Wl,--as-needed,-O1,--sort-common -Os -fomit-frame-pointer -Os -fomit-frame-pointer build/temp.linux-x86_64-cpython-311/Bio/PDB/kdtrees.o -L/usr/lib -o build/lib.linux-x86_64-cpython-311/Bio/PDB/kdtrees.cpython-311-x86_64-linux-musl.so building 'Bio.PDB.ccealign' extension gcc -DNDEBUG -g -fwrapv -O3 -Wall -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -DTHREAD_STACK_SIZE=0x200000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.11 -c Bio/PDB/ccealignmodule.c -o build/temp.linux-x86_64-cpython-311/Bio/PDB/ccealignmodule.o gcc -shared -Wl,--as-needed,-O1,--sort-common -Wl,--as-needed,-O1,--sort-common -Wl,--as-needed,-O1,--sort-common -Os -fomit-frame-pointer -Os -fomit-frame-pointer build/temp.linux-x86_64-cpython-311/Bio/PDB/ccealignmodule.o -L/usr/lib -o build/lib.linux-x86_64-cpython-311/Bio/PDB/ccealign.cpython-311-x86_64-linux-musl.so building 'Bio.SeqIO._twoBitIO' extension creating build/temp.linux-x86_64-cpython-311/Bio/SeqIO gcc -DNDEBUG -g -fwrapv -O3 -Wall -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -Os -fomit-frame-pointer -g -O2 -DTHREAD_STACK_SIZE=0x200000 -Os -fomit-frame-pointer -Os -fomit-frame-pointer -fPIC -I/usr/include/python3.11 -c Bio/SeqIO/_twoBitIO.c -o build/temp.linux-x86_64-cpython-311/Bio/SeqIO/_twoBitIO.o gcc -shared -Wl,--as-needed,-O1,--sort-common -Wl,--as-needed,-O1,--sort-common -Wl,--as-needed,-O1,--sort-common -Os -fomit-frame-pointer -Os -fomit-frame-pointer build/temp.linux-x86_64-cpython-311/Bio/SeqIO/_twoBitIO.o -L/usr/lib -o build/lib.linux-x86_64-cpython-311/Bio/SeqIO/_twoBitIO.cpython-311-x86_64-linux-musl.so >>> py3-biopython: Entering fakeroot... running install /usr/lib/python3.11/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running egg_info writing biopython.egg-info/PKG-INFO writing dependency_links to biopython.egg-info/dependency_links.txt writing requirements to biopython.egg-info/requires.txt writing top-level names to biopython.egg-info/top_level.txt reading manifest file 'biopython.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.py{}' found anywhere in distribution warning: no previously-included files matching '*.py-e' found anywhere in distribution warning: no previously-included files found matching 'Bio/Align/substitution_matrices/data/README.txt' adding license file 'LICENSE' adding license file 'LICENSE.rst' writing manifest file 'biopython.egg-info/SOURCES.txt' /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'Bio.Align.substitution_matrices.data' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'Bio.Align.substitution_matrices.data' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'Bio.Align.substitution_matrices.data' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'Bio.Align.substitution_matrices.data' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'Bio.Entrez.DTDs' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'Bio.Entrez.DTDs' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'Bio.Entrez.DTDs' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'Bio.Entrez.DTDs' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) /usr/lib/python3.11/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'Bio.Entrez.XSDs' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'Bio.Entrez.XSDs' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'Bio.Entrez.XSDs' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'Bio.Entrez.XSDs' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) running build_ext running install_lib creating /home/buildozer/aports/testing/py3-biopython/pkg creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11 creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio copying build/lib.linux-x86_64-cpython-311/Bio/MarkovModel.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Sequencing copying build/lib.linux-x86_64-cpython-311/Bio/Sequencing/Phd.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Sequencing creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Sequencing/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Sequencing/Applications/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Sequencing/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Sequencing/Applications/_samtools.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Sequencing/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Sequencing/Applications/_bwa.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Sequencing/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Sequencing/Applications/_Novoalign.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Sequencing/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Sequencing/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Sequencing copying build/lib.linux-x86_64-cpython-311/Bio/Sequencing/Ace.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Sequencing creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/CAPS copying build/lib.linux-x86_64-cpython-311/Bio/CAPS/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/CAPS creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Compass copying build/lib.linux-x86_64-cpython-311/Bio/Compass/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Compass creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/cealign.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/Atom.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/PDBList.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/SCADIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/PDBParser.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/MMCIF2Dict.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/ic_rebuild.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/kdtrees.c -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/ccealignmodule.c -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/parse_pdb_header.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/Entity.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/vectors.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/mmcifio.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/SASA.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/Selection.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/Polypeptide.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/Residue.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/MMCIFParser.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/Structure.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/PICIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/NACCESS.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/kdtrees.cpython-311-x86_64-linux-musl.so -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/internal_coords.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/StructureBuilder.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/AbstractPropertyMap.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/ic_data.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/Chain.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/DSSP.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/PDBExceptions.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/Model.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/QCPSuperimposer copying build/lib.linux-x86_64-cpython-311/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-311-x86_64-linux-musl.so -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/QCPSuperimposer copying build/lib.linux-x86_64-cpython-311/Bio/PDB/QCPSuperimposer/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/QCPSuperimposer copying build/lib.linux-x86_64-cpython-311/Bio/PDB/QCPSuperimposer/qcprotmodule.c -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/QCPSuperimposer copying build/lib.linux-x86_64-cpython-311/Bio/PDB/NeighborSearch.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/ccealign.cpython-311-x86_64-linux-musl.so -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/FragmentMapper.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/qcprot.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/mmtf copying build/lib.linux-x86_64-cpython-311/Bio/PDB/mmtf/DefaultParser.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/mmtf copying build/lib.linux-x86_64-cpython-311/Bio/PDB/mmtf/mmtfio.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/mmtf copying build/lib.linux-x86_64-cpython-311/Bio/PDB/mmtf/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/mmtf copying build/lib.linux-x86_64-cpython-311/Bio/PDB/PSEA.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/HSExposure.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/Superimposer.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/ResidueDepth.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/StructureAlignment.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/Dice.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB copying build/lib.linux-x86_64-cpython-311/Bio/PDB/PDBIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Emboss copying build/lib.linux-x86_64-cpython-311/Bio/Emboss/Primer3.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Emboss copying build/lib.linux-x86_64-cpython-311/Bio/Emboss/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Emboss copying build/lib.linux-x86_64-cpython-311/Bio/Emboss/PrimerSearch.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Emboss copying build/lib.linux-x86_64-cpython-311/Bio/Emboss/Applications.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Emboss creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/XSDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/XSDs/IPGReportSet.xsd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/XSDs creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/MMDB.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isoamsb.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isogrk3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/math.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/phrase.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/ePost_020511.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NSE.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmserials_080101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NSE.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/Docsum_3_3.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Variation.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/pmc-1.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-list1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/pubmed_100101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Submit.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isocyr2.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isomfrk.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isomscr.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/htmltable.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/EMBL_General.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/pubmed_090101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/format.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/mmlalias.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isogrk4.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isoamsr.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/archivecustom-mixes.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_General.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/OMSSA.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Biblio.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/pubmed_120101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-references1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Seqres.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isotech.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/BITS-question-answer2.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/esearch.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-link1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/mathml3.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-para1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/pubmed_130101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/chars.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/pubmed_080101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/archivecustom-modules.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/einfo.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/pubmed_150101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/archivecustom-classes.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Medlars.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-modules1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Mime.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Medline.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/PIR_General.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/pubmed_140101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/archivecustom-models.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/pubmed_180601.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/bookdoc_150101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-display1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/Docsum_3_1.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/pubmed_100301.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/eLink_090910.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Sequence.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/list.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isobox.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-notat1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/pubmed_020114.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/common.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-related-object1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/PIR_General.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-format1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/section.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/bookdoc_140101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/esummary-v1.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/SP_General.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/bookdoc_130101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isodia.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/bookdoc_120101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isogrk2.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/bookdoc_110101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isolat2.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/Docsum_3_4.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-funding1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isonum.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/para.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isoamsn.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/mmlextra.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isolat1.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isoamsa.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/GenBank_General.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/elink_020122.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/Docsum_3_2.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/backmatter.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/eSummary_041029.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/archivearticle.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/default-mixes.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/articlemeta.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_all.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isogrk1.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isocyr1.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/pubmed_190101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-chars1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/xhtml-table-1.mod -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Access.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/PRF_General.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/bookdoc_100301.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/egquery.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isomopf.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/link.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/HomoloGene.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/eSearch_020511.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/references.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Remap.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/Docsum_3_0.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/display.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/taxon.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_RNA.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-common1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Gene.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/OMSSA.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isopub.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/eInfo_020511.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isoamsc.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/eLink_101123.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/MMDB_Features.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-phrase1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-math1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Project.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/MMDB.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/notat.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/isoamso.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/mathml2.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/xmlspecchars.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/pubmed_110101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/PDB_General.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/mathml3-qname1.mod -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/mathml2-qname-1.mod -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/PRF_General.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/pubmed_130501.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/eSpell.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/mathml-in-pubmed.mod -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Mim.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/modules.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/PDB_General.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Systems.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Protein.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Organism.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/pubmed_180101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/default-classes.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/journalmeta.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmserials_100101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/JATS-section1-3.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Pub.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/BITS-embedded-index2.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/mathmlsetup.ent -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/DTDs/SP_General.dtd -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez copying build/lib.linux-x86_64-cpython-311/Bio/Entrez/Parser.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PopGen creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PopGen/GenePop copying build/lib.linux-x86_64-cpython-311/Bio/PopGen/GenePop/Controller.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PopGen/GenePop copying build/lib.linux-x86_64-cpython-311/Bio/PopGen/GenePop/LargeFileParser.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PopGen/GenePop copying build/lib.linux-x86_64-cpython-311/Bio/PopGen/GenePop/EasyController.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PopGen/GenePop copying build/lib.linux-x86_64-cpython-311/Bio/PopGen/GenePop/FileParser.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PopGen/GenePop copying build/lib.linux-x86_64-cpython-311/Bio/PopGen/GenePop/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PopGen/GenePop copying build/lib.linux-x86_64-cpython-311/Bio/PopGen/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PopGen creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/GenBank copying build/lib.linux-x86_64-cpython-311/Bio/GenBank/utils.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/GenBank copying build/lib.linux-x86_64-cpython-311/Bio/GenBank/Scanner.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/GenBank copying build/lib.linux-x86_64-cpython-311/Bio/GenBank/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/GenBank copying build/lib.linux-x86_64-cpython-311/Bio/GenBank/Record.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/GenBank creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Application copying build/lib.linux-x86_64-cpython-311/Bio/Application/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Application creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Affy copying build/lib.linux-x86_64-cpython-311/Bio/Affy/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Affy copying build/lib.linux-x86_64-cpython-311/Bio/Affy/CelFile.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Affy creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SVDSuperimposer copying build/lib.linux-x86_64-cpython-311/Bio/SVDSuperimposer/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SVDSuperimposer creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/HMM copying build/lib.linux-x86_64-cpython-311/Bio/HMM/MarkovModel.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/HMM copying build/lib.linux-x86_64-cpython-311/Bio/HMM/Utilities.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/HMM copying build/lib.linux-x86_64-cpython-311/Bio/HMM/Trainer.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/HMM copying build/lib.linux-x86_64-cpython-311/Bio/HMM/DynamicProgramming.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/HMM copying build/lib.linux-x86_64-cpython-311/Bio/HMM/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/HMM creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/UniProt copying build/lib.linux-x86_64-cpython-311/Bio/UniProt/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/UniProt copying build/lib.linux-x86_64-cpython-311/Bio/UniProt/GOA.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/UniProt creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Blast copying build/lib.linux-x86_64-cpython-311/Bio/Blast/NCBIXML.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Blast copying build/lib.linux-x86_64-cpython-311/Bio/Blast/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Blast copying build/lib.linux-x86_64-cpython-311/Bio/Blast/ParseBlastTable.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Blast copying build/lib.linux-x86_64-cpython-311/Bio/Blast/Record.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Blast copying build/lib.linux-x86_64-cpython-311/Bio/Blast/NCBIWWW.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Blast copying build/lib.linux-x86_64-cpython-311/Bio/Blast/Applications.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Blast creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/phenotype copying build/lib.linux-x86_64-cpython-311/Bio/phenotype/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/phenotype copying build/lib.linux-x86_64-cpython-311/Bio/phenotype/pm_fitting.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/phenotype copying build/lib.linux-x86_64-cpython-311/Bio/phenotype/phen_micro.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/phenotype creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/Enzyme copying build/lib.linux-x86_64-cpython-311/Bio/KEGG/Enzyme/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/Enzyme creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/Compound copying build/lib.linux-x86_64-cpython-311/Bio/KEGG/Compound/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/Compound creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/Map copying build/lib.linux-x86_64-cpython-311/Bio/KEGG/Map/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/Map creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/KGML copying build/lib.linux-x86_64-cpython-311/Bio/KEGG/KGML/KGML_pathway.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/KGML copying build/lib.linux-x86_64-cpython-311/Bio/KEGG/KGML/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/KGML copying build/lib.linux-x86_64-cpython-311/Bio/KEGG/KGML/KGML_parser.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/KGML copying build/lib.linux-x86_64-cpython-311/Bio/KEGG/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG copying build/lib.linux-x86_64-cpython-311/Bio/KEGG/REST.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/Gene copying build/lib.linux-x86_64-cpython-311/Bio/KEGG/Gene/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/Gene copying build/lib.linux-x86_64-cpython-311/Bio/bgzf.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/_io.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/NexusIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/PhyloXML.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/PhyloXMLIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/Consensus.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/Applications/_Raxml.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/Applications/_Phyml.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/Applications/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/Applications/_Fasttree.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/TreeConstruction.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/_cdao_owl.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML/_paml.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML/_parse_baseml.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML/_parse_codeml.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML/_parse_yn00.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML/yn00.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML/codeml.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML/chi2.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/PAML/baseml.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/CDAO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/_utils.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/NewickIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/NeXMLIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/NeXML.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/Newick.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/BaseTree.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo copying build/lib.linux-x86_64-cpython-311/Bio/Phylo/CDAOIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Data copying build/lib.linux-x86_64-cpython-311/Bio/Data/PDBData.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Data copying build/lib.linux-x86_64-cpython-311/Bio/Data/SCOPData.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Data copying build/lib.linux-x86_64-cpython-311/Bio/Data/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Data copying build/lib.linux-x86_64-cpython-311/Bio/Data/CodonTable.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Data copying build/lib.linux-x86_64-cpython-311/Bio/Data/IUPACData.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Data creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-cpython-311/Bio/ExPASy/Prosite.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-cpython-311/Bio/ExPASy/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-cpython-311/Bio/ExPASy/cellosaurus.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-cpython-311/Bio/ExPASy/ScanProsite.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-cpython-311/Bio/ExPASy/Prodoc.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-cpython-311/Bio/ExPASy/Enzyme.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-cpython-311/Bio/pairwise2.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio copying build/lib.linux-x86_64-cpython-311/Bio/MaxEntropy.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Restriction copying build/lib.linux-x86_64-cpython-311/Bio/Restriction/Restriction.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Restriction copying build/lib.linux-x86_64-cpython-311/Bio/Restriction/PrintFormat.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Restriction copying build/lib.linux-x86_64-cpython-311/Bio/Restriction/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Restriction copying build/lib.linux-x86_64-cpython-311/Bio/Restriction/Restriction_Dictionary.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Restriction copying build/lib.linux-x86_64-cpython-311/Bio/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio copying build/lib.linux-x86_64-cpython-311/Bio/Seq.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Alphabet copying build/lib.linux-x86_64-cpython-311/Bio/Alphabet/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Alphabet copying build/lib.linux-x86_64-cpython-311/Bio/SeqRecord.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SCOP copying build/lib.linux-x86_64-cpython-311/Bio/SCOP/Residues.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SCOP copying build/lib.linux-x86_64-cpython-311/Bio/SCOP/Raf.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SCOP copying build/lib.linux-x86_64-cpython-311/Bio/SCOP/Des.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SCOP copying build/lib.linux-x86_64-cpython-311/Bio/SCOP/Cla.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SCOP copying build/lib.linux-x86_64-cpython-311/Bio/SCOP/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SCOP copying build/lib.linux-x86_64-cpython-311/Bio/SCOP/Hie.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SCOP copying build/lib.linux-x86_64-cpython-311/Bio/SCOP/Dom.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SCOP creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_index.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/BlastIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/BlastIO/blast_xml.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/BlastIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/BlastIO/blast_tab.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/BlastIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/BlastIO/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/BlastIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/BlastIO/blast_text.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/BlastIO creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/HHsuiteIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/HHsuiteIO/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/HHsuiteIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/HHsuiteIO creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/ExonerateIO/exonerate_text.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/ExonerateIO/_base.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/ExonerateIO/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_utils.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_model copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_model/_base.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_model copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_model/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_model copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_model/query.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_model copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_model/hit.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_model copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_model/hsp.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_model copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/FastaIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/HmmerIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/HmmerIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/HmmerIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/HmmerIO/_base.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/HmmerIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/HmmerIO/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/HmmerIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/HmmerIO/hmmer2_text.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/HmmerIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/HmmerIO/hmmer3_text.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/HmmerIO creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_legacy copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_legacy/NCBIStandalone.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_legacy copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_legacy/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_legacy copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/_legacy/ParserSupport.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_legacy copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/BlatIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/InterproscanIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/InterproscanIO/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/InterproscanIO copying build/lib.linux-x86_64-cpython-311/Bio/SearchIO/InterproscanIO/interproscan_xml.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/InterproscanIO copying build/lib.linux-x86_64-cpython-311/Bio/File.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio copying build/lib.linux-x86_64-cpython-311/Bio/_utils.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Geo copying build/lib.linux-x86_64-cpython-311/Bio/Geo/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Geo copying build/lib.linux-x86_64-cpython-311/Bio/Geo/Record.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Geo creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Wise copying build/lib.linux-x86_64-cpython-311/Bio/Wise/psw.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Wise copying build/lib.linux-x86_64-cpython-311/Bio/Wise/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Wise copying build/lib.linux-x86_64-cpython-311/Bio/Wise/dnal.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Wise creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs copying build/lib.linux-x86_64-cpython-311/Bio/motifs/transfac.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs copying build/lib.linux-x86_64-cpython-311/Bio/motifs/xms.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs copying build/lib.linux-x86_64-cpython-311/Bio/motifs/minimal.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/applications copying build/lib.linux-x86_64-cpython-311/Bio/motifs/applications/_xxmotif.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/applications copying build/lib.linux-x86_64-cpython-311/Bio/motifs/applications/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/applications copying build/lib.linux-x86_64-cpython-311/Bio/motifs/mast.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs copying build/lib.linux-x86_64-cpython-311/Bio/motifs/meme.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs copying build/lib.linux-x86_64-cpython-311/Bio/motifs/pfm.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs copying build/lib.linux-x86_64-cpython-311/Bio/motifs/_pwm.c -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs copying build/lib.linux-x86_64-cpython-311/Bio/motifs/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs copying build/lib.linux-x86_64-cpython-311/Bio/motifs/_pwm.cpython-311-x86_64-linux-musl.so -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs copying build/lib.linux-x86_64-cpython-311/Bio/motifs/alignace.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs copying build/lib.linux-x86_64-cpython-311/Bio/motifs/thresholds.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs copying build/lib.linux-x86_64-cpython-311/Bio/motifs/matrix.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/jaspar copying build/lib.linux-x86_64-cpython-311/Bio/motifs/jaspar/db.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/jaspar copying build/lib.linux-x86_64-cpython-311/Bio/motifs/jaspar/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/jaspar copying build/lib.linux-x86_64-cpython-311/Bio/motifs/clusterbuster.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs copying build/lib.linux-x86_64-cpython-311/Bio/cpairwise2module.c -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio copying build/lib.linux-x86_64-cpython-311/Bio/kNN.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/GckIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/SffIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/TabIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/_index.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/SwissIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/IgIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/SnapGeneIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/PdbIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/AbiIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/XdnaIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/_twoBitIO.c -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/SeqXmlIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/_twoBitIO.cpython-311-x86_64-linux-musl.so -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/QualityIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/NibIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/FastaIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/PhdIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/Interfaces.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/AceIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/PirIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/UniprotIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/InsdcIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-cpython-311/Bio/SeqIO/TwoBitIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Pathway copying build/lib.linux-x86_64-cpython-311/Bio/Pathway/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Pathway creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Pathway/Rep copying build/lib.linux-x86_64-cpython-311/Bio/Pathway/Rep/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Pathway/Rep copying build/lib.linux-x86_64-cpython-311/Bio/Pathway/Rep/MultiGraph.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Pathway/Rep copying build/lib.linux-x86_64-cpython-311/Bio/Pathway/Rep/Graph.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Pathway/Rep creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/TogoWS copying build/lib.linux-x86_64-cpython-311/Bio/TogoWS/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/TogoWS copying build/lib.linux-x86_64-cpython-311/Bio/cpairwise2.cpython-311-x86_64-linux-musl.so -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/BasicChromosome.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/DisplayRepresentation.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/ColorSpiral.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/Comparative.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram/_Colors.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram/_Feature.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram/_CrossLink.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram/_Diagram.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram/_GraphSet.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram/_Graph.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/GenomeDiagram/_Track.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/Distribution.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics copying build/lib.linux-x86_64-cpython-311/Bio/Graphics/KGML_vis.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SwissProt copying build/lib.linux-x86_64-cpython-311/Bio/SwissProt/KeyWList.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SwissProt copying build/lib.linux-x86_64-cpython-311/Bio/SwissProt/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SwissProt copying build/lib.linux-x86_64-cpython-311/Bio/NaiveBayes.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/UniGene copying build/lib.linux-x86_64-cpython-311/Bio/UniGene/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/UniGene copying build/lib.linux-x86_64-cpython-311/Bio/LogisticRegression.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Medline copying build/lib.linux-x86_64-cpython-311/Bio/Medline/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Medline creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/bigpsl.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/sam.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/nexus.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/bed.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/psl.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/hhr.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/exonerate.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/emboss.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/tabular.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Align/Applications/_Prank.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Align/Applications/_Dialign.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Align/Applications/_ClustalOmega.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Align/Applications/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Align/Applications/_Muscle.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Align/Applications/_Probcons.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Align/Applications/_Clustalw.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Align/Applications/_TCoffee.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Align/Applications/_Mafft.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Align/Applications/_MSAProbs.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-cpython-311/Bio/Align/msf.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/_aligners.cpython-311-x86_64-linux-musl.so -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/fasta.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/_aligners.c -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/interfaces.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/stockholm.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/bigbed.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/HOXD70 -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/MCLACHLAN -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/BLOSUM80 -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/NUC.4.4 -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/RISLER -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/LEVIN -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/BLOSUM50 -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/BLASTN -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/BLOSUM62 -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/MDM78 -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/DAYHOFF -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/GONNET1992 -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/PAM30 -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/FENG -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/BLOSUM90 -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/JOHNSON -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/BENNER6 -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/GENETIC -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/MEGABLAST -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/PAM70 -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/PAM250 -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/BENNER74 -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/STR -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/BLOSUM45 -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/SCHNEIDER -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/TRANS -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/RAO -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/BENNER22 -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/JONES -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/data/BLASTP -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-cpython-311/Bio/Align/substitution_matrices/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices copying build/lib.linux-x86_64-cpython-311/Bio/Align/maf.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/AlignInfo.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/bigmaf.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/a2m.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/clustal.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/mauve.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align copying build/lib.linux-x86_64-cpython-311/Bio/Align/phylip.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/NMR copying build/lib.linux-x86_64-cpython-311/Bio/NMR/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/NMR copying build/lib.linux-x86_64-cpython-311/Bio/NMR/xpktools.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/NMR copying build/lib.linux-x86_64-cpython-311/Bio/NMR/NOEtools.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/NMR creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-cpython-311/Bio/SeqUtils/ProtParam.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-cpython-311/Bio/SeqUtils/CodonUsageIndices.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-cpython-311/Bio/SeqUtils/MeltingTemp.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-cpython-311/Bio/SeqUtils/CodonUsage.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-cpython-311/Bio/SeqUtils/CheckSum.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-cpython-311/Bio/SeqUtils/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-cpython-311/Bio/SeqUtils/lcc.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-cpython-311/Bio/SeqUtils/ProtParamData.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-cpython-311/Bio/SeqUtils/IsoelectricPoint.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/codonalign copying build/lib.linux-x86_64-cpython-311/Bio/codonalign/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/codonalign copying build/lib.linux-x86_64-cpython-311/Bio/codonalign/codonseq.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/codonalign copying build/lib.linux-x86_64-cpython-311/Bio/codonalign/codonalignment.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/codonalign copying build/lib.linux-x86_64-cpython-311/Bio/SeqFeature.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Nexus copying build/lib.linux-x86_64-cpython-311/Bio/Nexus/Trees.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Nexus copying build/lib.linux-x86_64-cpython-311/Bio/Nexus/cnexus.c -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Nexus copying build/lib.linux-x86_64-cpython-311/Bio/Nexus/cnexus.cpython-311-x86_64-linux-musl.so -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Nexus copying build/lib.linux-x86_64-cpython-311/Bio/Nexus/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Nexus copying build/lib.linux-x86_64-cpython-311/Bio/Nexus/StandardData.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Nexus copying build/lib.linux-x86_64-cpython-311/Bio/Nexus/Nexus.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Nexus copying build/lib.linux-x86_64-cpython-311/Bio/Nexus/Nodes.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Nexus creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-cpython-311/Bio/AlignIO/NexusIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-cpython-311/Bio/AlignIO/PhylipIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-cpython-311/Bio/AlignIO/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-cpython-311/Bio/AlignIO/FastaIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-cpython-311/Bio/AlignIO/EmbossIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-cpython-311/Bio/AlignIO/MauveIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-cpython-311/Bio/AlignIO/Interfaces.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-cpython-311/Bio/AlignIO/MafIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-cpython-311/Bio/AlignIO/StockholmIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-cpython-311/Bio/AlignIO/MsfIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-cpython-311/Bio/AlignIO/ClustalIO.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Cluster copying build/lib.linux-x86_64-cpython-311/Bio/Cluster/cluster.h -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Cluster copying build/lib.linux-x86_64-cpython-311/Bio/Cluster/_cluster.cpython-311-x86_64-linux-musl.so -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Cluster copying build/lib.linux-x86_64-cpython-311/Bio/Cluster/cluster.c -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Cluster copying build/lib.linux-x86_64-cpython-311/Bio/Cluster/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Cluster copying build/lib.linux-x86_64-cpython-311/Bio/Cluster/clustermodule.c -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Cluster creating /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/BioSQL copying build/lib.linux-x86_64-cpython-311/BioSQL/BioSeq.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/BioSQL copying build/lib.linux-x86_64-cpython-311/BioSQL/Loader.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/BioSQL copying build/lib.linux-x86_64-cpython-311/BioSQL/DBUtils.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/BioSQL copying build/lib.linux-x86_64-cpython-311/BioSQL/BioSeqDatabase.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/BioSQL copying build/lib.linux-x86_64-cpython-311/BioSQL/__init__.py -> /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/BioSQL byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/MarkovModel.py to MarkovModel.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Sequencing/Phd.py to Phd.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Sequencing/Applications/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Sequencing/Applications/_samtools.py to _samtools.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Sequencing/Applications/_bwa.py to _bwa.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Sequencing/Applications/_Novoalign.py to _Novoalign.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Sequencing/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Sequencing/Ace.py to Ace.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/CAPS/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Compass/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/cealign.py to cealign.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/Atom.py to Atom.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/PDBList.py to PDBList.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/SCADIO.py to SCADIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/PDBParser.py to PDBParser.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/MMCIF2Dict.py to MMCIF2Dict.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/ic_rebuild.py to ic_rebuild.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/parse_pdb_header.py to parse_pdb_header.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/Entity.py to Entity.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/vectors.py to vectors.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/mmcifio.py to mmcifio.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/SASA.py to SASA.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/Selection.py to Selection.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/Polypeptide.py to Polypeptide.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/Residue.py to Residue.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/MMCIFParser.py to MMCIFParser.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/Structure.py to Structure.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/PICIO.py to PICIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/NACCESS.py to NACCESS.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/internal_coords.py to internal_coords.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/StructureBuilder.py to StructureBuilder.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/AbstractPropertyMap.py to AbstractPropertyMap.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/ic_data.py to ic_data.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/Chain.py to Chain.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/DSSP.py to DSSP.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/PDBExceptions.py to PDBExceptions.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/Model.py to Model.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/QCPSuperimposer/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/NeighborSearch.py to NeighborSearch.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/FragmentMapper.py to FragmentMapper.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/qcprot.py to qcprot.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/mmtf/DefaultParser.py to DefaultParser.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/mmtf/mmtfio.py to mmtfio.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/mmtf/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/PSEA.py to PSEA.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/HSExposure.py to HSExposure.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/Superimposer.py to Superimposer.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/ResidueDepth.py to ResidueDepth.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/StructureAlignment.py to StructureAlignment.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/Dice.py to Dice.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PDB/PDBIO.py to PDBIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Emboss/Primer3.py to Primer3.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Emboss/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Emboss/PrimerSearch.py to PrimerSearch.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Emboss/Applications.py to Applications.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Entrez/Parser.py to Parser.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PopGen/GenePop/Controller.py to Controller.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PopGen/GenePop/LargeFileParser.py to LargeFileParser.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PopGen/GenePop/EasyController.py to EasyController.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PopGen/GenePop/FileParser.py to FileParser.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PopGen/GenePop/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/PopGen/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/GenBank/utils.py to utils.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/GenBank/Scanner.py to Scanner.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/GenBank/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/GenBank/Record.py to Record.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Application/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Affy/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Affy/CelFile.py to CelFile.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SVDSuperimposer/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/HMM/MarkovModel.py to MarkovModel.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/HMM/Utilities.py to Utilities.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/HMM/Trainer.py to Trainer.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/HMM/DynamicProgramming.py to DynamicProgramming.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/HMM/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/UniProt/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/UniProt/GOA.py to GOA.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Blast/NCBIXML.py to NCBIXML.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Blast/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Blast/ParseBlastTable.py to ParseBlastTable.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Blast/Record.py to Record.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Blast/NCBIWWW.py to NCBIWWW.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Blast/Applications.py to Applications.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/phenotype/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/phenotype/pm_fitting.py to pm_fitting.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/phenotype/phen_micro.py to phen_micro.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/Enzyme/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/Compound/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/Map/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/KGML/KGML_pathway.py to KGML_pathway.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/KGML/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/KGML/KGML_parser.py to KGML_parser.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/REST.py to REST.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/KEGG/Gene/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/bgzf.py to bgzf.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/_io.py to _io.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/NexusIO.py to NexusIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PhyloXML.py to PhyloXML.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PhyloXMLIO.py to PhyloXMLIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/Consensus.py to Consensus.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/Applications/_Raxml.py to _Raxml.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/Applications/_Phyml.py to _Phyml.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/Applications/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/Applications/_Fasttree.py to _Fasttree.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/TreeConstruction.py to TreeConstruction.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/_cdao_owl.py to _cdao_owl.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML/_paml.py to _paml.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML/_parse_baseml.py to _parse_baseml.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML/_parse_codeml.py to _parse_codeml.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML/_parse_yn00.py to _parse_yn00.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML/yn00.py to yn00.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML/codeml.py to codeml.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML/chi2.py to chi2.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/PAML/baseml.py to baseml.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/CDAO.py to CDAO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/_utils.py to _utils.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/NewickIO.py to NewickIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/NeXMLIO.py to NeXMLIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/NeXML.py to NeXML.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/Newick.py to Newick.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/BaseTree.py to BaseTree.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Phylo/CDAOIO.py to CDAOIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Data/PDBData.py to PDBData.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Data/SCOPData.py to SCOPData.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Data/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Data/CodonTable.py to CodonTable.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Data/IUPACData.py to IUPACData.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/ExPASy/Prosite.py to Prosite.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/ExPASy/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/ExPASy/cellosaurus.py to cellosaurus.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/ExPASy/ScanProsite.py to ScanProsite.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/ExPASy/Prodoc.py to Prodoc.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/ExPASy/Enzyme.py to Enzyme.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/pairwise2.py to pairwise2.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/MaxEntropy.py to MaxEntropy.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Restriction/Restriction.py to Restriction.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Restriction/PrintFormat.py to PrintFormat.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Restriction/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Restriction/Restriction_Dictionary.py to Restriction_Dictionary.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Seq.py to Seq.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Alphabet/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqRecord.py to SeqRecord.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SCOP/Residues.py to Residues.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SCOP/Raf.py to Raf.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SCOP/Des.py to Des.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SCOP/Cla.py to Cla.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SCOP/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SCOP/Hie.py to Hie.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SCOP/Dom.py to Dom.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_index.py to _index.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/BlastIO/blast_xml.py to blast_xml.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/BlastIO/blast_tab.py to blast_tab.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/BlastIO/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/BlastIO/blast_text.py to blast_text.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/HHsuiteIO/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py to hhsuite2_text.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/ExonerateIO/exonerate_cigar.py to exonerate_cigar.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/ExonerateIO/exonerate_text.py to exonerate_text.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/ExonerateIO/_base.py to _base.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/ExonerateIO/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py to exonerate_vulgar.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_utils.py to _utils.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_model/_base.py to _base.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_model/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_model/query.py to query.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_model/hit.py to hit.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_model/hsp.py to hsp.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/FastaIO.py to FastaIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/HmmerIO/hmmer3_domtab.py to hmmer3_domtab.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/HmmerIO/hmmer3_tab.py to hmmer3_tab.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/HmmerIO/_base.py to _base.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/HmmerIO/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/HmmerIO/hmmer2_text.py to hmmer2_text.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/HmmerIO/hmmer3_text.py to hmmer3_text.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_legacy/NCBIStandalone.py to NCBIStandalone.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_legacy/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/_legacy/ParserSupport.py to ParserSupport.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/BlatIO.py to BlatIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/InterproscanIO/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SearchIO/InterproscanIO/interproscan_xml.py to interproscan_xml.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/File.py to File.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/_utils.py to _utils.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Geo/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Geo/Record.py to Record.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Wise/psw.py to psw.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Wise/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Wise/dnal.py to dnal.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/transfac.py to transfac.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/xms.py to xms.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/minimal.py to minimal.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/applications/_xxmotif.py to _xxmotif.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/applications/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/mast.py to mast.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/meme.py to meme.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/pfm.py to pfm.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/alignace.py to alignace.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/thresholds.py to thresholds.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/matrix.py to matrix.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/jaspar/db.py to db.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/jaspar/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/motifs/clusterbuster.py to clusterbuster.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/kNN.py to kNN.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/GckIO.py to GckIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/SffIO.py to SffIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/TabIO.py to TabIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/_index.py to _index.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/SwissIO.py to SwissIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/IgIO.py to IgIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/SnapGeneIO.py to SnapGeneIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/PdbIO.py to PdbIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/AbiIO.py to AbiIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/XdnaIO.py to XdnaIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/SeqXmlIO.py to SeqXmlIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/QualityIO.py to QualityIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/NibIO.py to NibIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/FastaIO.py to FastaIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/PhdIO.py to PhdIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/Interfaces.py to Interfaces.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/AceIO.py to AceIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/PirIO.py to PirIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/UniprotIO.py to UniprotIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/InsdcIO.py to InsdcIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqIO/TwoBitIO.py to TwoBitIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Pathway/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Pathway/Rep/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Pathway/Rep/MultiGraph.py to MultiGraph.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Pathway/Rep/Graph.py to Graph.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/TogoWS/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/BasicChromosome.py to BasicChromosome.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/DisplayRepresentation.py to DisplayRepresentation.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/ColorSpiral.py to ColorSpiral.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/Comparative.py to Comparative.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py to _AbstractDrawer.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram/_Colors.py to _Colors.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram/_Feature.py to _Feature.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram/_FeatureSet.py to _FeatureSet.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram/_CrossLink.py to _CrossLink.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram/_LinearDrawer.py to _LinearDrawer.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram/_Diagram.py to _Diagram.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram/_CircularDrawer.py to _CircularDrawer.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram/_GraphSet.py to _GraphSet.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram/_Graph.py to _Graph.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/GenomeDiagram/_Track.py to _Track.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/Distribution.py to Distribution.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Graphics/KGML_vis.py to KGML_vis.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SwissProt/KeyWList.py to KeyWList.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SwissProt/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/NaiveBayes.py to NaiveBayes.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/UniGene/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/LogisticRegression.py to LogisticRegression.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Medline/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/bigpsl.py to bigpsl.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/sam.py to sam.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/nexus.py to nexus.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/bed.py to bed.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/psl.py to psl.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/hhr.py to hhr.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/exonerate.py to exonerate.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/emboss.py to emboss.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/tabular.py to tabular.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications/_Prank.py to _Prank.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications/_Dialign.py to _Dialign.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications/_ClustalOmega.py to _ClustalOmega.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications/_Muscle.py to _Muscle.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications/_Probcons.py to _Probcons.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications/_Clustalw.py to _Clustalw.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications/_TCoffee.py to _TCoffee.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications/_Mafft.py to _Mafft.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/Applications/_MSAProbs.py to _MSAProbs.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/msf.py to msf.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/fasta.py to fasta.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/interfaces.py to interfaces.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/stockholm.py to stockholm.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/bigbed.py to bigbed.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/substitution_matrices/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/maf.py to maf.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/AlignInfo.py to AlignInfo.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/bigmaf.py to bigmaf.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/a2m.py to a2m.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/clustal.py to clustal.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/mauve.py to mauve.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Align/phylip.py to phylip.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/NMR/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/NMR/xpktools.py to xpktools.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/NMR/NOEtools.py to NOEtools.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils/ProtParam.py to ProtParam.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils/CodonUsageIndices.py to CodonUsageIndices.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils/MeltingTemp.py to MeltingTemp.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils/CodonUsage.py to CodonUsage.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils/CheckSum.py to CheckSum.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils/lcc.py to lcc.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils/ProtParamData.py to ProtParamData.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqUtils/IsoelectricPoint.py to IsoelectricPoint.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/codonalign/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/codonalign/codonseq.py to codonseq.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/codonalign/codonalignment.py to codonalignment.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/SeqFeature.py to SeqFeature.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Nexus/Trees.py to Trees.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Nexus/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Nexus/StandardData.py to StandardData.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Nexus/Nexus.py to Nexus.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Nexus/Nodes.py to Nodes.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO/NexusIO.py to NexusIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO/PhylipIO.py to PhylipIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO/FastaIO.py to FastaIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO/EmbossIO.py to EmbossIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO/MauveIO.py to MauveIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO/Interfaces.py to Interfaces.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO/MafIO.py to MafIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO/StockholmIO.py to StockholmIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO/MsfIO.py to MsfIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/AlignIO/ClustalIO.py to ClustalIO.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/Bio/Cluster/__init__.py to __init__.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/BioSQL/BioSeq.py to BioSeq.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/BioSQL/Loader.py to Loader.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/BioSQL/DBUtils.py to DBUtils.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/BioSQL/BioSeqDatabase.py to BioSeqDatabase.cpython-311.pyc byte-compiling /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/BioSQL/__init__.py to __init__.cpython-311.pyc running install_egg_info Copying biopython.egg-info to /home/buildozer/aports/testing/py3-biopython/pkg/py3-biopython/usr/lib/python3.11/site-packages/biopython-1.80-py3.11.egg-info running install_scripts >>> py3-biopython*: Running postcheck for py3-biopython >>> py3-biopython*: Preparing package py3-biopython... >>> py3-biopython*: Stripping binaries >>> py3-biopython*: Scanning shared objects >>> py3-biopython*: Tracing dependencies... py3-numpy python3 so:libc.musl-x86_64.so.1 >>> py3-biopython*: Package size: 20.0 MB >>> py3-biopython*: Compressing data... >>> py3-biopython*: Create checksum... >>> py3-biopython*: Create py3-biopython-1.80-r0.apk >>> py3-biopython: Build complete at Thu, 01 Dec 2022 05:09:38 +0000 elapsed time 0h 0m 24s >>> py3-biopython: Cleaning up srcdir >>> py3-biopython: Cleaning up pkgdir >>> py3-biopython: Uninstalling dependencies... (1/18) Purging .makedepends-py3-biopython (20221201.050916) (2/18) Purging py3-setuptools (65.6.3-r0) (3/18) Purging py3-packaging (21.3-r3) (4/18) Purging py3-parsing (3.0.9-r1) (5/18) Purging py3-numpy-dev (1.23.5-r0) (6/18) Purging py3-numpy (1.23.5-r0) (7/18) Purging python3-dev (3.11.0-r2) (8/18) Purging python3 (3.11.0-r2) (9/18) Purging openblas (0.3.21-r0) (10/18) Purging libgfortran (12.2.1_git20220924-r4) (11/18) Purging libquadmath (12.2.1_git20220924-r4) (12/18) Purging libbz2 (1.0.8-r4) (13/18) Purging libffi (3.4.4-r0) (14/18) Purging gdbm (1.23-r0) (15/18) Purging xz-libs (5.2.8-r0) (16/18) Purging mpdecimal (2.5.1-r1) (17/18) Purging readline (8.2.0-r0) (18/18) Purging sqlite-libs (3.40.0-r0) Executing busybox-1.35.0-r29.trigger OK: 393 MiB in 98 packages >>> py3-biopython: Updating the testing/x86_64 repository index... >>> py3-biopython: Signing the index...